Conservation of cofitness between Atu0346 and Atu2155 in Agrobacterium fabrum C58

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu0346 uridylyltransferase/uridylyl-removing enzyme UTase 1.0 Atu2155 methionine synthase 0.49 15
Rhizobium sp. OAE497 0.75 ABIE40_RS01765 [protein-PII] uridylyltransferase 0.89 ABIE40_RS12135 methionine synthase 0.79 22
Sinorhizobium meliloti 1021 0.72 SMc01124 PII uridylyl-transferase 0.79 SMc03112 B12-dependent methionine synthase 0.66 61
Rhodopseudomonas palustris CGA009 0.51 TX73_003060 [protein-PII] uridylyltransferase 0.71 TX73_019180 methionine synthase low > 86
Azospirillum sp. SherDot2 0.42 MPMX19_00912 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.21 MPMX19_00637 Methionine synthase — —
Rhodospirillum rubrum S1H 0.41 Rru_A3539 GlnB (protein PII) uridylyltransferase, GlnD (NCBI) 0.20 Rru_A1531 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) — —
Magnetospirillum magneticum AMB-1 0.40 AMB_RS22650 [protein-PII] uridylyltransferase 0.22 AMB_RS02225 methionine synthase — —
Pseudomonas sp. S08-1 0.25 OH686_06495 protein-P-II uridylyltransferase 0.60 OH686_03335 methionine synthase low > 80
Pseudomonas putida KT2440 0.24 PP_1589 uridylyltransferase 0.60 PP_2375 cobalamin-dependent methionine synthase 0.22 91
Pseudomonas stutzeri RCH2 0.24 Psest_2845 [Protein-PII] uridylyltransferase 0.61 Psest_2102 5-methyltetrahydrofolate--homocysteine methyltransferase low > 67
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_3081 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.59 Pf1N1B4_5661 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 87
Pseudomonas simiae WCS417 0.24 PS417_06200 protein-PII uridylyltransferase 0.59 PS417_12310 methionine synthase 0.58 39
Pseudomonas fluorescens SBW25 0.23 PFLU_RS06265 [protein-PII] uridylyltransferase 0.59 PFLU_RS13000 methionine synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS06265 [protein-PII] uridylyltransferase 0.59 PFLU_RS13000 methionine synthase 0.16 103
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_16450 protein-PII uridylyltransferase 0.59 AO353_21615 methionine synthase low > 101
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_06050 protein-PII uridylyltransferase 0.59 AO356_00545 methionine synthase low > 104
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4711 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.59 PfGW456L13_2847 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.45 68
Pseudomonas fluorescens FW300-N2E2 0.23 Pf6N2E2_3072 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.59 Pf6N2E2_2068 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) 0.54 16
Pseudomonas sp. RS175 0.22 PFR28_00394 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.60 PFR28_01369 Methionine synthase 0.36 36
Pseudomonas syringae pv. syringae B728a ΔmexB 0.22 Psyr_1341 Protein-P-II uridylyltransferase 0.59 Psyr_2464 methionine synthase (B12-dependent) low > 86
Pseudomonas syringae pv. syringae B728a 0.22 Psyr_1341 Protein-P-II uridylyltransferase 0.59 Psyr_2464 methionine synthase (B12-dependent) low > 86
Dickeya dadantii 3937 0.22 DDA3937_RS05105 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.60 DDA3937_RS19040 methionine synthase low > 74
Dickeya dianthicola ME23 0.22 DZA65_RS05445 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.60 DZA65_RS20250 methionine synthase low > 75
Dickeya dianthicola 67-19 0.22 HGI48_RS05105 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.59 HGI48_RS19130 methionine synthase low > 71
Serratia liquefaciens MT49 0.21 IAI46_20270 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.60 IAI46_23155 methionine synthase low > 86
Escherichia coli ECRC62 0.21 BNILDI_09090 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 BNILDI_06140 metH methionine synthase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.21 OHPLBJKB_03497 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.58 OHPLBJKB_04030 Methionine synthase low > 73
Escherichia coli BL21 0.21 ECD_00165 uridylyltransferase 0.58 ECD_03891 homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent low > 60
Escherichia coli ECOR27 0.21 NOLOHH_02580 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 NOLOHH_05380 metH methionine synthase — —
Escherichia coli Nissle 1917 0.21 ECOLIN_RS00915 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 ECOLIN_RS23160 methionine synthase — —
Escherichia coli ECOR38 0.21 HEPCGN_08185 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 HEPCGN_11885 metH methionine synthase — —
Escherichia coli BW25113 0.21 b0167 glnD PII uridylyl-transferase (NCBI) 0.58 b4019 metH B12-dependent methionine synthase (NCBI) low > 76
Escherichia coli ECRC101 0.21 OKFHMN_10235 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 OKFHMN_13240 metH methionine synthase — —
Escherichia fergusonii Becca 0.21 EFB2_03878 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.58 EFB2_04592 Methionine synthase — —
Escherichia coli ECRC101 0.21 MCAODC_00750 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 MCAODC_03740 metH methionine synthase — —
Escherichia coli ECRC99 0.21 KEDOAH_17920 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 KEDOAH_14920 metH methionine synthase — —
Escherichia coli ECRC102 0.21 NIAGMN_08085 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 NIAGMN_10990 metH methionine synthase — —
Escherichia coli ECRC98 0.21 JDDGAC_13830 glnD bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 JDDGAC_16865 metH methionine synthase — —
Pectobacterium carotovorum WPP14 0.21 HER17_RS16345 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.59 HER17_RS02310 methionine synthase low > 75
Herbaspirillum seropedicae SmR1 0.21 HSERO_RS10865 PII uridylyl-transferase 0.58 HSERO_RS21740 methionine synthase low > 78
Marinobacter adhaerens HP15 0.21 HP15_1163 [protein-PII] uridylyltransferase 0.62 HP15_1792 B12-dependent methionine synthase low > 73
Klebsiella michiganensis M5al 0.21 BWI76_RS05200 bifunctional uridylyltransferase/uridylyl-removing protein 0.59 BWI76_RS01685 methionine synthase low > 92
Enterobacter asburiae PDN3 0.21 EX28DRAFT_3754 UTP--GlnB (protein PII) uridylyltransferase, GlnD 0.59 EX28DRAFT_4326 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.21 GFF55 [Protein-PII] uridylyltransferase (EC 2.7.7.59) 0.59 GFF1358 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) low > 78
Pantoea sp. MT58 0.21 IAI47_15540 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 IAI47_17990 methionine synthase low > 76
Enterobacter sp. TBS_079 0.21 MPMX20_00851 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.58 MPMX20_00235 Methionine synthase — —
Rahnella sp. WP5 0.21 EX31_RS13045 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.60 EX31_RS11760 methionine synthase low > 89
Kangiella aquimarina DSM 16071 0.20 B158DRAFT_1072 UTP--GlnB (protein PII) uridylyltransferase, GlnD 0.60 B158DRAFT_2466 methionine synthase (B12-dependent) (EC 2.1.1.13) low > 40
Acinetobacter radioresistens SK82 0.20 MPMX26_01867 Bifunctional uridylyltransferase/uridylyl-removing enzyme 0.59 MPMX26_02351 Methionine synthase low > 36
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_11520 bifunctional uridylyltransferase/uridylyl-removing protein GlnD 0.58 CSW01_02060 methionine synthase low > 62
Dechlorosoma suillum PS 0.20 Dsui_2696 (protein-PII) uridylyltransferase 0.57 Dsui_0779 5-methyltetrahydrofolate--homocysteine methyltransferase — —
Shewanella loihica PV-4 0.20 Shew_2637 PII uridylyl-transferase (RefSeq) 0.60 Shew_0710 metH B12-dependent methionine synthase (RefSeq) low > 60
Castellaniella sp019104865 MT123 0.19 ABCV34_RS04120 [protein-PII] uridylyltransferase 0.55 ABCV34_RS14560 methionine synthase low > 48
Shewanella amazonensis SB2B 0.19 Sama_1137 PII uridylyl-transferase (RefSeq) 0.60 Sama_0758 metH B12-dependent methionine synthase (RefSeq) 0.67 36
Shewanella sp. ANA-3 0.18 Shewana3_2817 PII uridylyl-transferase (RefSeq) 0.59 Shewana3_3282 metH B12-dependent methionine synthase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.18 SO1626 glnD protein-P-II uridylyltransferase (NCBI ptt file) 0.59 SO1030 metH 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI ptt file) low > 76

Not shown: 31 genomes with orthologs for Atu0346 only; 7 genomes with orthologs for Atu2155 only