Conservation of cofitness between Atu1140 and Atu2015 in Agrobacterium fabrum C58

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu1140 phosphoribosyalaminoimidazole-succinocarboxamide synthase 1.0 Atu2015 aminotransferase 0.89 17
Rhizobium sp. OAE497 0.66 ABIE40_RS06555 phosphoribosylglycinamide formyltransferase 0.80 ABIE40_RS11345 PLP-dependent aminotransferase family protein low > 107
Sinorhizobium meliloti 1021 0.65 SMc00614 phosphoribosylglycinamide formyltransferase 0.78 SMc04323 aminotransferase low > 103
Rhodospirillum rubrum S1H 0.49 Rru_A2168 Phosphoribosylglycinamide formyltransferase (NCBI) 0.53 Rru_A3004 Aminotransferase, class I and II (NCBI) — —
Castellaniella sp019104865 MT123 0.49 ABCV34_RS05225 phosphoribosylglycinamide formyltransferase 0.38 ABCV34_RS13175 PLP-dependent aminotransferase family protein — —
Azospirillum brasilense Sp245 0.47 AZOBR_RS16295 phosphoribosylglycinamide formyltransferase 0.50 AZOBR_RS06555 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) low > 97
Azospirillum sp. SherDot2 0.45 MPMX19_01305 Phosphoribosylglycinamide formyltransferase 0.49 MPMX19_01777 2-aminoadipate transaminase — —
Pseudomonas fluorescens SBW25 0.45 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein low > 109
Pseudomonas simiae WCS417 0.45 PS417_20125 phosphoribosylglycinamide formyltransferase 0.29 PS417_19385 GntR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.45 PFLU_RS22070 phosphoribosylglycinamide formyltransferase 0.29 PFLU_RS21355 PLP-dependent aminotransferase family protein low > 109
Ralstonia solanacearum GMI1000 0.44 RS_RS12320 phosphoribosylglycinamide formyltransferase 0.37 RS_RS04875 PLP-dependent aminotransferase family protein — —
Rahnella sp. WP5 0.44 EX31_RS22690 phosphoribosylglycinamide formyltransferase 0.27 EX31_RS14780 PLP-dependent aminotransferase family protein low > 89
Herbaspirillum seropedicae SmR1 0.44 HSERO_RS05910 phosphoribosylglycinamide formyltransferase 0.37 HSERO_RS09050 2-aminoadipate aminotransferase 0.23 32
Paraburkholderia sabiae LMG 24235 0.43 QEN71_RS03040 phosphoribosylglycinamide formyltransferase 0.38 QEN71_RS24660 PLP-dependent aminotransferase family protein 0.52 44
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_02685 phosphoribosylglycinamide formyltransferase 0.27 AO353_02295 GntR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_19085 phosphoribosylglycinamide formyltransferase 0.26 AO356_19495 GntR family transcriptional regulator low > 104
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS04760 phosphoribosylglycinamide formyltransferase 0.37 RALBFv3_RS14095 PLP-dependent aminotransferase family protein — —
Ralstonia solanacearum UW163 0.43 UW163_RS08910 phosphoribosylglycinamide formyltransferase 0.37 UW163_RS15715 PLP-dependent aminotransferase family protein — —
Ralstonia solanacearum PSI07 0.42 RPSI07_RS12625 phosphoribosylglycinamide formyltransferase 0.37 RPSI07_RS19365 PLP-dependent aminotransferase family protein low > 81
Paraburkholderia bryophila 376MFSha3.1 0.42 H281DRAFT_04075 formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase 0.37 H281DRAFT_00271 2-aminoadipate transaminase low > 103
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_5728 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.26 Pf6N2E2_5813 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 103
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS15670 phosphoribosylglycinamide formyltransferase 0.37 BPHYT_RS05965 2-aminoadipate aminotransferase low > 109
Pseudomonas fluorescens FW300-N1B4 0.42 Pf1N1B4_3697 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.27 Pf1N1B4_3771 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas sp. RS175 0.42 PFR28_03218 Phosphoribosylglycinamide formyltransferase 0.26 PFR28_03135 2-aminoadipate transaminase low > 88
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS00380 phosphoribosylglycinamide formyltransferase 0.37 ABZR87_RS09815 PLP-dependent aminotransferase family protein — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1709 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.30 Ac3H11_1358 L-leucine transaminase; L-isoleucine transaminase (EC 2.6.1.42) (from data) — —
Paraburkholderia graminis OAS925 0.41 ABIE53_003298 phosphoribosylglycinamide formyltransferase-1 0.38 ABIE53_001399 2-aminoadipate transaminase low > 113
Variovorax sp. SCN45 0.41 GFF6047 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.34 GFF1574 Alpha-aminoadipate aminotransferase (EC 2.6.1.39) @ Leucine transaminase (EC 2.6.1.6) @ Valine transaminase low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF767 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.30 GFF1752 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 90
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0167 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.27 EX28DRAFT_2740 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 76
Dickeya dianthicola 67-19 0.40 HGI48_RS06065 phosphoribosylglycinamide formyltransferase 0.26 HGI48_RS20705 PLP-dependent aminotransferase family protein low > 71
Enterobacter sp. TBS_079 0.40 MPMX20_03355 Phosphoribosylglycinamide formyltransferase 0.26 MPMX20_03530 2-aminoadipate transaminase low > 85
Dickeya dianthicola ME23 0.40 DZA65_RS06415 phosphoribosylglycinamide formyltransferase 0.27 DZA65_RS21720 PLP-dependent aminotransferase family protein low > 75
Erwinia tracheiphila SCR3 0.40 LU632_RS08270 purN phosphoribosylglycinamide formyltransferase 0.08 LU632_RS00055 valine--pyruvate transaminase low > 74
Dickeya dadantii 3937 0.39 DDA3937_RS06020 phosphoribosylglycinamide formyltransferase 0.26 DDA3937_RS00685 PLP-dependent aminotransferase family protein low > 74
Pseudomonas stutzeri RCH2 0.39 Psest_1473 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 0.28 Psest_1990 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs low > 67
Pseudomonas fluorescens GW456-L13 0.39 PfGW456L13_4253 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.26 PfGW456L13_4175 Transcriptional regulator, GntR family domain / Aspartate aminotransferase (EC 2.6.1.1) low > 87
Serratia liquefaciens MT49 0.39 IAI46_18890 phosphoribosylglycinamide formyltransferase 0.26 IAI46_00985 PLP-dependent aminotransferase family protein low > 86
Pectobacterium carotovorum WPP14 0.39 HER17_RS15470 phosphoribosylglycinamide formyltransferase 0.25 HER17_RS00520 PLP-dependent aminotransferase family protein low > 75
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS17050 phosphoribosylglycinamide formyltransferase 0.34 RR42_RS14595 2-aminoadipate aminotransferase low > 128
Klebsiella michiganensis M5al 0.39 BWI76_RS20970 phosphoribosylglycinamide formyltransferase 0.27 BWI76_RS24235 Branched-chain-amino-acid transaminase (EC 2.6.1.42) (from data) low > 92
Caulobacter crescentus NA1000 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.53 CCNA_02244 aminotransferase class I family protein low > 66
Caulobacter crescentus NA1000 Δfur 0.37 CCNA_01774 phosphoribosylglycinamide formyltransferase 0.53 CCNA_02244 aminotransferase class I family protein low > 67
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.1673.1 Phosphoribosylglycinamide formyltransferase (EC 2.1.2.2) 0.37 Xcc-8004.2917.1 Valine--pyruvate aminotransferase (EC 2.6.1.66) low > 74

Not shown: 39 genomes with orthologs for Atu1140 only; 10 genomes with orthologs for Atu2015 only