Conservation of cofitness between AO353_10245 and AO353_13300 in Pseudomonas fluorescens FW300-N2E3

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_10245 GDP-mannose 4,6-dehydratase 1.0 AO353_13300 LOG family protein 0.31 8
Pseudomonas fluorescens GW456-L13 0.94 PfGW456L13_2338 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.92 PfGW456L13_132 Lysine decarboxylase family 0.35 41
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1965 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.92 Pf1N1B4_1389 Lysine decarboxylase family low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_11835 GDP-mannose 4,6-dehydratase 0.89 AO356_08535 LOG family protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.91 Pf6N2E2_4242 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.89 Pf6N2E2_3589 Lysine decarboxylase family low > 103
Pseudomonas sp. RS175 0.91 PFR28_04554 GDP-mannose 4,6-dehydratase 0.86 PFR28_05145 'Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase' transl_table=11 low > 88
Pseudomonas sp. S08-1 0.83 OH686_11980 GDP-mannose 4,6-dehydratase 0.78 OH686_16655 Lysine decarboxylase family low > 80
Caulobacter crescentus NA1000 Δfur 0.65 CCNA_01062 GDP-mannose 4,6 dehydratase 0.30 CCNA_01372 lysine decarboxylase family low > 67
Caulobacter crescentus NA1000 0.65 CCNA_01062 GDP-mannose 4,6 dehydratase 0.30 CCNA_01372 lysine decarboxylase family low > 66
Azospirillum brasilense Sp245 0.64 AZOBR_RS33465 GDP-mannose 4 6-dehydratase 0.55 AZOBR_RS14105 LOG family protein low > 97
Bosea sp. OAE506 0.62 ABIE41_RS02910 GDP-mannose 4,6-dehydratase 0.61 ABIE41_RS21595 TIGR00730 family Rossman fold protein low > 77
Brevundimonas sp. GW460-12-10-14-LB2 0.60 A4249_RS12980 GDP-mannose 4,6-dehydratase 0.28 A4249_RS08515 TIGR00730 family Rossman fold protein low > 48
Rhodopseudomonas palustris CGA009 0.59 TX73_020470 GDP-mannose 4,6-dehydratase 0.39 TX73_010330 TIGR00730 family Rossman fold protein low > 86
Ralstonia solanacearum PSI07 0.58 RPSI07_RS19840 GDP-mannose 4,6-dehydratase 0.59 RPSI07_RS14205 TIGR00730 family Rossman fold protein low > 81
Pseudomonas putida KT2440 0.57 PP_1799 GDP-mannose 4,6-dehydratase 0.77 PP_4871 putative lysine decarboxylase family protein low > 96
Xanthomonas campestris pv. campestris strain 8004 0.57 Xcc-8004.4503.1 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.50 Xcc-8004.3415.1 Lysine decarboxylase family low > 74
Rhodanobacter sp. FW510-T8 0.57 OKGIIK_01210 gmd GDP-mannose 4,6-dehydratase 0.50 OKGIIK_05925 TIGR00730 family Rossman fold protein low > 52
Burkholderia phytofirmans PsJN 0.56 BPHYT_RS09760 GDP-D-mannose dehydratase 0.56 BPHYT_RS06500 LOG family protein
Variovorax sp. OAS795 0.56 ABID97_RS05705 GDP-mannose 4,6-dehydratase 0.45 ABID97_RS14855 TIGR00730 family Rossman fold protein low > 91
Paraburkholderia graminis OAS925 0.56 ABIE53_002191 GDPmannose 4,6-dehydratase 0.56 ABIE53_001565 uncharacterized protein (TIGR00730 family) low > 113
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_00954 GDPmannose 4,6-dehydratase 0.56 H281DRAFT_04542 hypothetical protein low > 103
Paraburkholderia sabiae LMG 24235 0.55 QEN71_RS21680 GDP-mannose 4,6-dehydratase 0.57 QEN71_RS24290 TIGR00730 family Rossman fold protein low > 153
Pontibacter actiniarum KMM 6156, DSM 19842 0.53 CA264_05200 GDP-mannose 4,6-dehydratase 0.47 CA264_15135 TIGR00730 family Rossman fold protein low > 74
Dechlorosoma suillum PS 0.52 Dsui_0085 GDP-mannose 4,6-dehydratase 0.58 Dsui_0979 TIGR00730 family protein low > 51
Mycobacterium tuberculosis H37Rv 0.52 Rv1511 GDP-D-mannose dehydratase GmdA (GDP-mannose 4,6 dehydratase) (GMD) 0.30 Rv1205 Conserved hypothetical protein low > 58
Azospirillum sp. SherDot2 0.51 MPMX19_06644 GDP-mannose 4,6-dehydratase 0.44 MPMX19_06138 Putative cytokinin riboside 5'-monophosphate phosphoribohydrolase low > 112
Phocaeicola dorei CL03T12C01 0.51 ABI39_RS20410 GDP-mannose 4,6-dehydratase 0.38 ABI39_RS05550 TIGR00730 family Rossman fold protein low > 72
Mucilaginibacter yixingensis YX-36 DSM 26809 0.51 ABZR88_RS18375 GDP-mannose 4,6-dehydratase 0.45 ABZR88_RS10320 TIGR00730 family Rossman fold protein
Phocaeicola vulgatus CL09T03C04 0.51 HMPREF1058_RS06615 GDP-mannose 4,6-dehydratase 0.25 HMPREF1058_RS11790 TIGR00730 family Rossman fold protein low > 67
Pedobacter sp. GW460-11-11-14-LB5 0.51 CA265_RS19210 GDP-mannose 4,6-dehydratase 0.40 CA265_RS10665 Rossman fold protein, TIGR00730 family
Parabacteroides merdae CL09T00C40 0.51 HMPREF1078_RS00185 GDP-mannose 4,6-dehydratase 0.42 HMPREF1078_RS06240 TIGR00730 family Rossman fold protein low > 61
Dinoroseobacter shibae DFL-12 0.51 Dshi_4139 GDP-mannose 4,6-dehydratase (RefSeq) 0.41 Dshi_1767 hypothetical protein (RefSeq) low > 64
Castellaniella sp019104865 MT123 0.51 ABCV34_RS12935 GDP-mannose 4,6-dehydratase 0.42 ABCV34_RS10940 TIGR00730 family Rossman fold protein
Bacteroides thetaiotaomicron VPI-5482 0.51 BT1224 GDP-mannose 4,6-dehydratase (NCBI ptt file) 0.42 BT3224 putative lysine decarboxylase (NCBI ptt file)
Hydrogenophaga sp. GW460-11-11-14-LB1 0.50 GFF1842 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.47 GFF4273 Lysine decarboxylase family low > 90
Bacteroides ovatus ATCC 8483 0.50 BACOVA_00511 GDP-mannose 4,6-dehydratase 0.41 BACOVA_02921 TIGR00730 family protein low > 94
Bacteroides stercoris CC31F 0.50 HMPREF1181_RS12530 GDP-mannose 4,6-dehydratase 0.37 HMPREF1181_RS01670 TIGR00730 family Rossman fold protein low > 56
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS34465 GDP-mannose 4,6-dehydratase 0.56 RR42_RS05385 LOG family protein low > 128
Magnetospirillum magneticum AMB-1 0.50 AMB_RS05505 GDP-mannose 4,6-dehydratase 0.56 AMB_RS14390 TIGR00730 family Rossman fold protein
Echinicola vietnamensis KMM 6221, DSM 17526 0.50 Echvi_4398 GDP-mannose 4,6-dehydratase 0.49 Echvi_0909 TIGR00730 family protein low > 79
Rhodospirillum rubrum S1H 0.49 Rru_B0047 NAD-dependent epimerase/dehydratase (NCBI) 0.41 Rru_A0357 hypothetical protein (NCBI) low > 58
Dickeya dadantii 3937 0.49 DDA3937_RS18665 GDP-mannose 4,6-dehydratase 0.49 DDA3937_RS17825 TIGR00730 family Rossman fold protein low > 74
Dickeya dianthicola ME23 0.48 DZA65_RS19730 GDP-mannose 4,6-dehydratase 0.45 DZA65_RS18910 TIGR00730 family Rossman fold protein low > 75
Dickeya dianthicola 67-19 0.48 HGI48_RS18595 GDP-mannose 4,6-dehydratase 0.45 HGI48_RS17765 TIGR00730 family Rossman fold protein low > 71
Variovorax sp. SCN45 0.48 GFF61 GDP-mannose 4,6-dehydratase (EC 4.2.1.47) 0.47 GFF1152 Lysine decarboxylase family low > 127
Phaeobacter inhibens DSM 17395 0.48 PGA1_65p00310 GDP-mannose 4,6-dehydratase Gmd 0.34 PGA1_c19080 TIGR00730 family protein low > 62
Pseudomonas stutzeri RCH2 0.48 Psest_1818 GDP-mannose 4,6-dehydratase 0.75 Psest_3243 TIGR00730 family protein low > 67
Rhodanobacter denitrificans MT42 0.47 LRK55_RS03650 GDP-mannose 4,6-dehydratase 0.50 LRK55_RS00740 TIGR00730 family Rossman fold protein low > 63

Not shown: 25 genomes with orthologs for AO353_10245 only; 15 genomes with orthologs for AO353_13300 only