Conservation of cofitness between AO353_14090 and AO353_00900 in Pseudomonas fluorescens FW300-N2E3

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_14090 alkylphosphonate utilization protein 1.0 AO353_00900 2-methylisocitrate lyase 0.32 7
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS25385 alkylphosphonate utilization protein 0.97 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas simiae WCS417 0.98 PS417_23570 hypothetical protein 0.97 PS417_21080 2-methylisocitrate lyase — —
Pseudomonas fluorescens SBW25 0.98 PFLU_RS25385 alkylphosphonate utilization protein 0.97 PFLU_RS22690 methylisocitrate lyase low > 109
Pseudomonas fluorescens FW300-N1B4 0.97 Pf1N1B4_2795 Alkylphosphonate utilization operon protein PhnA 0.99 Pf1N1B4_3819 Methylisocitrate lyase (EC 4.1.3.30) low > 87
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_1467 Alkylphosphonate utilization operon protein PhnA 0.97 PfGW456L13_4118 Methylisocitrate lyase (EC 4.1.3.30) low > 87
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_15790 alkylphosphonate utilization protein 0.97 AO356_20865 2-methylisocitrate lyase low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_5098 Alkylphosphonate utilization operon protein PhnA 0.96 Pf6N2E2_6061 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 103
Pseudomonas putida KT2440 0.93 PP_0686 conserved protein of unknown function 0.92 PP_2334 2-methylisocitrate lyase low > 96
Pseudomonas sp. RS175 0.88 PFR28_03774 hypothetical protein 0.98 PFR28_02928 2-methylisocitrate lyase low > 88
Pseudomonas sp. S08-1 0.87 OH686_07235 Protein PhnA 0.72 OH686_01690 methylisocitrate lyase low > 80
Pseudomonas syringae pv. syringae B728a 0.83 Psyr_0863 PhnA protein 0.91 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.83 Psyr_0863 PhnA protein 0.91 Psyr_2085 methylisocitrate lyase low > 86
Pseudomonas stutzeri RCH2 0.79 Psest_0770 alkylphosphonate utilization operon protein PhnA 0.92 Psest_2321 methylisocitrate lyase low > 67
Ralstonia solanacearum PSI07 0.77 RPSI07_RS06075 hypothetical protein 0.80 RPSI07_RS14645 methylisocitrate lyase low > 81
Ralstonia solanacearum GMI1000 0.77 RS_RS23785 hypothetical protein 0.80 RS_RS10050 methylisocitrate lyase low > 80
Ralstonia solanacearum IBSBF1503 0.76 RALBFv3_RS17545 alkylphosphonate utilization protein 0.81 RALBFv3_RS02670 methylisocitrate lyase low > 76
Ralstonia solanacearum UW163 0.76 UW163_RS21605 alkylphosphonate utilization protein 0.80 UW163_RS11055 methylisocitrate lyase — —
Marinobacter adhaerens HP15 0.73 HP15_843 PhnA protein 0.66 HP15_1932 methylisocitrate lyase 2 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF1466 Alkylphosphonate utilization operon protein PhnA 0.77 GFF4263 Methylisocitrate lyase (EC 4.1.3.30) low > 78
Escherichia coli ECRC100 0.70 OKFHMN_12605 yjdM Protein YjdM 0.75 OKFHMN_08900 prpB methylisocitrate lyase low > 80
Escherichia coli ECRC99 0.70 KEDOAH_15560 yjdM Protein YjdM 0.75 KEDOAH_19065 prpB methylisocitrate lyase — —
Escherichia coli ECRC102 0.70 NIAGMN_10450 yjdM Protein YjdM 0.75 NIAGMN_06955 prpB methylisocitrate lyase — —
Escherichia coli BL21 0.70 ECD_03979 zinc-ribbon family protein 0.76 ECD_00286 2-methylisocitrate lyase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03937 hypothetical protein 0.76 OHPLBJKB_03339 2-methylisocitrate lyase low > 73
Escherichia fergusonii Becca 0.70 EFB2_04475 hypothetical protein 0.75 EFB2_03706 2-methylisocitrate lyase low > 86
Escherichia coli ECOR38 0.70 HEPCGN_11240 yjdM Protein YjdM 0.75 HEPCGN_07485 prpB methylisocitrate lyase low > 87
Escherichia coli BW25113 0.70 b4108 phnA hypothetical protein (NCBI) 0.76 b0331 prpB 2-methylisocitrate lyase (NCBI) low > 76
Escherichia coli ECRC62 0.70 BNILDI_06620 yjdM Protein YjdM 0.76 BNILDI_23190 prpB methylisocitrate lyase 0.45 48
Escherichia coli ECRC101 0.70 MCAODC_03115 yjdM Protein YjdM 0.75 MCAODC_28130 prpB methylisocitrate lyase low > 87
Escherichia coli ECOR27 0.70 NOLOHH_04870 yjdM Protein YjdM 0.76 NOLOHH_01775 prpB methylisocitrate lyase low > 75
Escherichia coli Nissle 1917 0.70 ECOLIN_RS23775 zinc ribbon domain-containing protein YjdM 0.75 ECOLIN_RS02150 methylisocitrate lyase low > 55
Escherichia coli ECRC98 0.70 JDDGAC_16240 yjdM Protein YjdM 0.75 JDDGAC_12555 prpB methylisocitrate lyase low > 86
Dickeya dianthicola 67-19 0.66 HGI48_RS05390 alkylphosphonate utilization protein 0.17 HGI48_RS06990 phosphoenolpyruvate mutase low > 71
Acinetobacter radioresistens SK82 0.66 MPMX26_00660 hypothetical protein 0.62 MPMX26_01289 2-methylisocitrate lyase — —
Dickeya dianthicola ME23 0.66 DZA65_RS05690 alkylphosphonate utilization protein 0.17 DZA65_RS07470 phosphoenolpyruvate mutase — —
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS13640 hypothetical protein 0.85 HSERO_RS15660 2-methylisocitrate lyase — —
Shewanella loihica PV-4 0.63 Shew_1931 alkylphosphonate utilization operon protein PhnA (RefSeq) 0.65 Shew_1820 prpB 2-methylisocitrate lyase (RefSeq) low > 60
Azospirillum brasilense Sp245 0.62 AZOBR_RS09590 putative Zn-ribbon-containing protein involved in phosphonate metabolism PhnA-like protein 0.28 AZOBR_RS24315 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 97
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS12375 zinc ribbon domain-containing protein YjdM 0.82 ABZR87_RS14590 methylisocitrate lyase low > 80
Rhodospirillum rubrum S1H 0.55 Rru_A1476 PhnA protein (NCBI) 0.37 Rru_A2320 Ankyrin (NCBI) low > 58
Azospirillum sp. SherDot2 0.54 MPMX19_01079 hypothetical protein 0.30 MPMX19_04657 2,3-dimethylmalate lyase low > 112
Burkholderia phytofirmans PsJN 0.54 BPHYT_RS24510 alkylphosphonate utilization protein 0.31 BPHYT_RS26855 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 109
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS12350 alkylphosphonate utilization protein 0.81 RR42_RS11260 Methylisocitrate lyase (EC 4.1.3.30) (from data) low > 128
Alteromonas macleodii MIT1002 0.50 MIT1002_00555 putative alkylphosphonate utilization operon protein PhnA 0.62 MIT1002_03129 Methylisocitrate lyase low > 70
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_05381 phosphonoacetate hydrolase 0.30 H281DRAFT_02892 carboxyvinyl-carboxyphosphonate phosphorylmutase low > 103
Xanthomonas campestris pv. campestris strain 8004 0.45 Xcc-8004.3628.1 Alkylphosphonate utilization operon protein PhnA 0.70 Xcc-8004.3981.1 Methylisocitrate lyase (EC 4.1.3.30) low > 74
Dyella japonica UNC79MFTsu3.2 0.44 ABZR86_RS00195 zinc ribbon domain-containing protein YjdM 0.72 ABZR86_RS08480 methylisocitrate lyase low > 74
Rhodanobacter denitrificans MT42 0.44 LRK55_RS15460 zinc ribbon domain-containing protein YjdM 0.65 LRK55_RS00470 methylisocitrate lyase low > 63
Rhodanobacter denitrificans FW104-10B01 0.44 LRK54_RS15710 alkylphosphonate utilization protein 0.65 LRK54_RS00695 methylisocitrate lyase low > 59
Rhodanobacter sp. FW510-T8 0.43 OKGIIK_04380 Phosphonoacetate hydrolase 0.65 OKGIIK_06565 prpB methylisocitrate lyase low > 52
Lysobacter sp. OAE881 0.43 ABIE51_RS11320 zinc ribbon domain-containing protein YjdM 0.64 ABIE51_RS06015 methylisocitrate lyase low > 62

Not shown: 17 genomes with orthologs for AO353_14090 only; 14 genomes with orthologs for AO353_00900 only