| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Ralstonia sp. UNC404CL21Col | 1.0 | ABZR87_RS16125 | | heme biosynthesis protein HemY | 1.0 | ABZR87_RS13315 | | RluA family pseudouridine synthase | 0.61 | 3 |
| Ralstonia solanacearum PSI07 | 0.92 | RPSI07_RS13115 | | heme biosynthesis protein HemY | 0.91 | RPSI07_RS15970 | | RluA family pseudouridine synthase | low | > 81 |
| Ralstonia solanacearum UW163 | 0.91 | UW163_RS09435 | | heme biosynthesis protein HemY | 0.88 | UW163_RS14830 | | RluA family pseudouridine synthase | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.91 | RALBFv3_RS04235 | | heme biosynthesis protein HemY | 0.88 | RALBFv3_RS01520 | | RluA family pseudouridine synthase | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.87 | RS_RS11825 | | heme biosynthesis protein HemY | 0.89 | RS_RS08205 | | RluA family pseudouridine synthase | low | > 80 |
| Cupriavidus basilensis FW507-4G11 | 0.70 | RR42_RS15890 | | heme biosynthesis protein HemY | 0.65 | RR42_RS07590 | | pseudouridine synthase | low | > 128 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_00200 | | HemY protein | 0.53 | H281DRAFT_00848 | | ribosomal large subunit pseudouridine synthase D (EC 5.4.99.-) | — | — |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_001317 | | HemY protein | 0.53 | ABIE53_002062 | | 23S rRNA pseudouridine1911/1915/1917 synthase | low | > 113 |
| Burkholderia phytofirmans PsJN | 0.46 | BPHYT_RS05240 | | heme biosynthesis protein HemY | 0.53 | BPHYT_RS09135 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS24940 | | heme biosynthesis protein HemY | 0.54 | QEN71_RS22215 | | RluA family pseudouridine synthase | — | — |
| Herbaspirillum seropedicae SmR1 | 0.40 | HSERO_RS14650 | | porphyrin biosynthesis protein | 0.44 | HSERO_RS15070 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Dechlorosoma suillum PS | 0.24 | Dsui_1599 | | putative enzyme of heme biosynthesis | 0.42 | Dsui_2530 | | pseudouridine synthase, RluA family | low | > 51 |
| Variovorax sp. OAS795 | 0.14 | ABID97_RS08240 | | heme biosynthesis HemY N-terminal domain-containing protein | 0.36 | ABID97_RS14190 | | RluA family pseudouridine synthase | low | > 91 |
| Pseudomonas fluorescens FW300-N2E3 | 0.13 | AO353_08975 | | heme biosynthesis protein HemY | 0.39 | AO353_14220 | | ribosomal large subunit pseudouridine synthase D | low | > 101 |
| Acidovorax sp. GW101-3H11 | 0.13 | Ac3H11_3549 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.37 | Ac3H11_1787 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | low | > 79 |
| Pseudomonas fluorescens FW300-N2C3 | 0.13 | AO356_12800 | | heme biosynthesis protein HemY | 0.39 | AO356_15925 | | ribosomal large subunit pseudouridine synthase D | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.13 | Pf6N2E2_4433 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.38 | Pf6N2E2_5127 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas simiae WCS417 | 0.12 | PS417_27515 | | heme biosynthesis protein HemY | 0.38 | PS417_03820 | | ribosomal large subunit pseudouridine synthase D | — | — |
| Pseudomonas fluorescens SBW25-INTG | 0.12 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.38 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 109 |
| Pseudomonas fluorescens SBW25 | 0.12 | PFLU_RS29195 | | heme biosynthesis protein HemY | 0.38 | PFLU_RS03870 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 109 |
| Kangiella aquimarina DSM 16071 | 0.12 | B158DRAFT_0255 | | Uncharacterized enzyme of heme biosynthesis | 0.36 | B158DRAFT_2532 | | Pseudouridylate synthases, 23S RNA-specific | low | > 40 |
| Pseudomonas fluorescens FW300-N1B4 | 0.11 | Pf1N1B4_2188 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.38 | Pf1N1B4_2822 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas fluorescens GW456-L13 | 0.11 | PfGW456L13_859 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.38 | PfGW456L13_1493 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | — | — |
| Pseudomonas sp. RS175 | 0.11 | PFR28_04363 | | Protein HemY | 0.39 | PFR28_03748 | | Ribosomal large subunit pseudouridine synthase D | low | > 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.11 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.39 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | 0.61 | 6 |
| Pseudomonas syringae pv. syringae B728a | 0.11 | Psyr_0059 | | HemY, N-terminal:HemY, N-terminal:HemY, N-terminal | 0.39 | Psyr_0726 | | ribosomal large subunit pseudouridine synthase D | low | > 86 |
| Pseudomonas putida KT2440 | 0.10 | PP_0189 | | putative heme biosynthesis protein | 0.40 | PP_0623 | | 23S rRNA pseudouridine(1911,1915,1917) synthase | — | — |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.09 | GFF119 | | Uncharacterized protein EC-HemY, likely associated with heme metabolism based on gene clustering with hemC, hemD in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.37 | GFF4870 | | Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) | low | > 90 |
| Rhodanobacter sp. FW510-T8 | 0.09 | OKGIIK_16770 | | Heme biosynthesis protein HemY | 0.37 | OKGIIK_01790 | rluD | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 52 |
| Pseudomonas stutzeri RCH2 | 0.09 | Psest_3745 | | Uncharacterized enzyme of heme biosynthesis | 0.39 | Psest_0709 | | pseudouridine synthase, RluA family | low | > 67 |
| Rhodanobacter denitrificans MT42 | 0.09 | LRK55_RS06605 | | heme biosynthesis HemY N-terminal domain-containing protein | 0.38 | LRK55_RS04745 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.09 | LRK54_RS06860 | | hypothetical protein | 0.38 | LRK54_RS04965 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 59 |
| Marinobacter adhaerens HP15 | 0.07 | HP15_237 | | HemY domain protein | 0.40 | HP15_527 | | pseudouridine synthase, RluA family | low | > 73 |
| Variovorax sp. SCN45 | 0.07 | GFF3842 | | Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.35 | GFF988 | | LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) | 0.70 | 26 |
| Pseudomonas sp. S08-1 | 0.07 | OH686_13915 | | Uncharacterized protein EC-HemY in Proteobacteria (unrelated to HemY-type PPO in GramPositives) | 0.38 | OH686_16410 | | LSU rRNA pseudouridine(1911/1915/1917) synthase | low | > 80 |
| Klebsiella michiganensis M5al | 0.07 | BWI76_RS01165 | | protoheme IX biogenesis protein HemY | 0.35 | BWI76_RS21450 | | 23S rRNA pseudouridine(1911/1915/1917) synthase | low | > 92 |
| Rahnella sp. WP5 | 0.07 | EX31_RS15130 | | protoheme IX biogenesis protein HemY | 0.36 | EX31_RS07570 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 89 |
| Dyella japonica UNC79MFTsu3.2 | 0.07 | ABZR86_RS16955 | | heme biosynthesis HemY N-terminal domain-containing protein | 0.36 | ABZR86_RS10965 | | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | low | > 74 |
| Enterobacter sp. TBS_079 | 0.06 | MPMX20_04473 | | Protein HemY | 0.35 | MPMX20_03463 | | Ribosomal large subunit pseudouridine synthase D | low | > 85 |
Not shown: 0 genomes with orthologs for ABZR87_RS16125 only; 57 genomes with orthologs for ABZR87_RS13315 only