Conservation of cofitness between ABZR87_RS17475 and ABZR87_RS00440 in Ralstonia sp. UNC404CL21Col

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia sp. UNC404CL21Col 1.0 ABZR87_RS17475 3-hydroxyisobutyrate dehydrogenase 1.0 ABZR87_RS00440 ATP-dependent Clp protease adapter ClpS 0.39 7
Ralstonia solanacearum PSI07 0.81 RPSI07_RS02325 3-hydroxyisobutyrate dehydrogenase 1.00 RPSI07_RS12570 ATP-dependent Clp protease adaptor ClpS low > 81
Ralstonia solanacearum IBSBF1503 0.81 RALBFv3_RS20415 3-hydroxyisobutyrate dehydrogenase 1.00 RALBFv3_RS04815 ATP-dependent Clp protease adaptor ClpS low > 76
Ralstonia solanacearum UW163 0.81 UW163_RS18760 3-hydroxyisobutyrate dehydrogenase 1.00 UW163_RS08855 ATP-dependent Clp protease adaptor ClpS — —
Burkholderia phytofirmans PsJN 0.79 BPHYT_RS28025 3-hydroxyisobutyrate dehydrogenase 0.79 BPHYT_RS15715 ATP-dependent Clp protease adapter protein ClpS low > 109
Paraburkholderia sabiae LMG 24235 0.78 QEN71_RS12390 3-hydroxyisobutyrate dehydrogenase 0.79 QEN71_RS03000 ATP-dependent Clp protease adapter ClpS low > 153
Ralstonia solanacearum GMI1000 0.78 RS_RS20225 3-hydroxyisobutyrate dehydrogenase 1.00 RS_RS12375 ATP-dependent Clp protease adaptor ClpS low > 80
Paraburkholderia bryophila 376MFSha3.1 0.76 H281DRAFT_01201 3-hydroxyisobutyrate dehydrogenase 0.80 H281DRAFT_04083 ATP-dependent Clp protease adaptor protein ClpS low > 103
Paraburkholderia graminis OAS925 0.75 ABIE53_005735 3-hydroxyisobutyrate dehydrogenase 0.80 ABIE53_003307 ATP-dependent Clp protease adaptor protein ClpS low > 113
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS28555 3-hydroxyisobutyrate dehydrogenase 0.93 RR42_RS17110 ATP-dependent Clp protease adapter protein ClpS — —
Pseudomonas fluorescens SBW25 0.67 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase 0.51 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS 0.47 91
Pseudomonas fluorescens SBW25-INTG 0.67 PFLU_RS25535 3-hydroxyisobutyrate dehydrogenase 0.51 PFLU_RS18555 ATP-dependent Clp protease adapter ClpS low > 109
Pseudomonas putida KT2440 0.63 PP_4666 3-hydroxyisobutyrate dehydrogenase 0.51 PP_4009 ATP-dependent Clp protease adapter protein ClpS low > 96
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS15390 3-hydroxyisobutyrate dehydrogenase 0.78 HSERO_RS07025 ATP-dependent Clp protease ClpS low > 78
Shewanella oneidensis MR-1 0.48 SO1682 mmsB 3-hydroxyisobutyrate dehydrogenase (NCBI ptt file) 0.51 SO2627 conserved hypothetical protein (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.48 Ac3H11_2362 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.63 Ac3H11_2457 ATP-dependent Clp protease adaptor protein ClpS low > 79
Azospirillum brasilense Sp245 0.47 AZOBR_RS22360 3-hydroxyisobutyrate dehydrogenase 0.49 AZOBR_RS05180 Clp protease ClpS low > 97
Variovorax sp. OAS795 0.45 ABID97_RS19405 3-hydroxyisobutyrate dehydrogenase 0.64 ABID97_RS16915 ATP-dependent Clp protease adapter ClpS 0.35 41
Shewanella sp. ANA-3 0.44 Shewana3_2766 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.51 Shewana3_1752 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Shewanella amazonensis SB2B 0.44 Sama_1380 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.48 Sama_2057 clpS ATP-dependent Clp protease adaptor protein ClpS (RefSeq) low > 62
Shewanella loihica PV-4 0.43 Shew_1672 3-hydroxyisobutyrate dehydrogenase (RefSeq) 0.51 Shew_1565 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) — —
Agrobacterium fabrum C58 0.43 Atu4129 3-hydroxyisobutyrate dehydrogenase 0.52 Atu1363 ATP-dependent Clp protease adaptor protein ClpS — —
Sinorhizobium meliloti 1021 0.42 SM_b20751 3-hydroxyisobutyrate dehydrogenase 0.51 SMc02110 ATP-dependent Clp protease adaptor protein ClpS — —
Bosea sp. OAE506 0.41 ABIE41_RS23930 3-hydroxyisobutyrate dehydrogenase 0.50 ABIE41_RS18240 ATP-dependent Clp protease adapter ClpS low > 77
Azospirillum sp. SherDot2 0.40 MPMX19_05421 putative 3-hydroxyisobutyrate dehydrogenase 0.54 MPMX19_00504 ATP-dependent Clp protease adapter protein ClpS low > 112
Sphingomonas koreensis DSMZ 15582 0.39 Ga0059261_3686 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) 0.50 Ga0059261_1285 Uncharacterized conserved protein low > 68
Rhodopseudomonas palustris CGA009 0.38 TX73_017835 3-hydroxyisobutyrate dehydrogenase 0.48 TX73_016275 ATP-dependent Clp protease adapter ClpS low > 86
Alteromonas macleodii MIT1002 0.36 MIT1002_03327 3-hydroxyisobutyrate dehydrogenase 0.51 MIT1002_01833 ATP-dependent Clp protease adapter protein ClpS low > 70
Phaeobacter inhibens DSM 17395 0.34 PGA1_c17360 3-hydroxyisobutyrate dehydrogenase MmsB 0.44 PGA1_c30000 ATP-dependent Clp protease adaptor protein ClpS low > 62
Escherichia coli ECRC62 0.30 BNILDI_05370 yihU sulfolactaldehyde 3-reductase 0.55 BNILDI_20440 clpS ATP-dependent Clp protease adapter ClpS low > 75
Escherichia coli ECOR27 0.30 NOLOHH_06160 yihU sulfolactaldehyde 3-reductase 0.55 NOLOHH_22185 clpS ATP-dependent Clp protease adapter ClpS low > 75
Escherichia coli BW25113 0.30 b3882 yihU predicted oxidoreductase with NAD(P)-binding Rossmann-fold domain (NCBI) 0.55 b0881 clpS ATP-dependent Clp protease adaptor protein ClpS (NCBI) low > 76
Enterobacter sp. TBS_079 0.30 MPMX20_04587 3-sulfolactaldehyde reductase 0.55 MPMX20_01543 ATP-dependent Clp protease adapter protein ClpS low > 85
Escherichia coli ECOR38 0.30 HEPCGN_12660 yihU sulfolactaldehyde 3-reductase 0.55 HEPCGN_22895 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia coli ECRC101 0.29 MCAODC_04525 yihU sulfolactaldehyde 3-reductase 0.55 MCAODC_25005 clpS ATP-dependent Clp protease adapter ClpS low > 87
Escherichia coli ECRC102 0.29 NIAGMN_11780 yihU sulfolactaldehyde 3-reductase 0.55 NIAGMN_03830 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC99 0.29 KEDOAH_14130 yihU sulfolactaldehyde 3-reductase 0.55 KEDOAH_22120 clpS ATP-dependent Clp protease adapter ClpS — —
Escherichia coli ECRC100 0.29 OKFHMN_14025 yihU sulfolactaldehyde 3-reductase 0.55 OKFHMN_05790 clpS ATP-dependent Clp protease adapter ClpS low > 80
Escherichia coli ECRC98 0.29 JDDGAC_17650 yihU sulfolactaldehyde 3-reductase 0.55 JDDGAC_09425 clpS ATP-dependent Clp protease adapter ClpS low > 86
Enterobacter asburiae PDN3 0.29 EX28DRAFT_4360 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 0.55 EX28DRAFT_2051 Uncharacterized conserved protein low > 76
Escherichia coli BL21 0.29 ECD_03767 3-sulfolactaldehyde (SLA) reductase, NADH-dependent; gamma-hydroxybutyrate dehydrogenase, NADH-dependent 0.55 ECD_00886 regulatory protein for ClpA substrate specificity low > 61
Escherichia fergusonii Becca 0.27 EFB2_04739 3-sulfolactaldehyde reductase 0.55 EFB2_03180 ATP-dependent Clp protease adapter protein ClpS low > 86
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_2320 6-phosphogluconate dehydrogenase NAD-binding (RefSeq) 0.44 DvMF_0459 ATP-dependent Clp protease adaptor protein ClpS (RefSeq) low > 51
Dyella japonica UNC79MFTsu3.2 0.23 ABZR86_RS00420 NAD(P)-dependent oxidoreductase 0.48 ABZR86_RS02195 ATP-dependent Clp protease adapter ClpS low > 74
Rhodanobacter denitrificans MT42 0.20 LRK55_RS14400 NAD(P)-dependent oxidoreductase 0.48 LRK55_RS00165 ATP-dependent Clp protease adapter ClpS low > 63
Rhodanobacter denitrificans FW104-10B01 0.20 LRK54_RS14685 NAD(P)-dependent oxidoreductase 0.48 LRK54_RS00425 ATP-dependent Clp protease adapter ClpS low > 59
Rhodanobacter sp. FW510-T8 0.19 OKGIIK_03510 mmsB 3-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenase 0.48 OKGIIK_06885 clpS ATP-dependent Clp protease adapter ClpS low > 52

Not shown: 25 genomes with orthologs for ABZR87_RS17475 only; 16 genomes with orthologs for ABZR87_RS00440 only