Conservation of cofitness between Shewana3_4051 and Shewana3_1461 in Shewanella sp. ANA-3

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_4051 oligopeptidase A (RefSeq) 1.0 Shewana3_1461 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) 0.43 17
Shewanella oneidensis MR-1 0.95 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.93 SO3088 fatty oxidation complex, alpha subunit (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.83 Shew_3657 oligopeptidase A (RefSeq) 0.78 Shew_2425 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) low > 60
Shewanella amazonensis SB2B 0.80 Sama_3546 oligopeptidase A (RefSeq) 0.79 Sama_2167 fadJ multifunctional fatty acid oxidation complex subunit alpha (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_01010 oligopeptidase A 0.54 CSW01_05330 fatty acid oxidation complex subunit alpha FadJ low > 62
Serratia liquefaciens MT49 0.67 IAI46_24210 oligopeptidase A 0.57 IAI46_18045 fatty acid oxidation complex subunit alpha FadJ low > 86
Alteromonas macleodii MIT1002 0.67 MIT1002_03633 Oligopeptidase A 0.59 MIT1002_01287 Fatty acid oxidation complex subunit alpha low > 70
Dickeya dadantii 3937 0.66 DDA3937_RS21265 oligopeptidase A 0.49 DDA3937_RS14600 fatty acid oxidation complex subunit alpha FadJ low > 74
Rahnella sp. WP5 0.65 EX31_RS05165 oligopeptidase A 0.55 EX31_RS19705 fatty acid oxidation complex subunit alpha FadJ low > 89
Pantoea sp. MT58 0.65 IAI47_01345 oligopeptidase A 0.56 IAI47_06130 fatty acid oxidation complex subunit alpha FadJ low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_04397 Oligopeptidase A 0.57 MPMX20_03268 Fatty acid oxidation complex subunit alpha low > 85
Dickeya dianthicola ME23 0.65 DZA65_RS00035 oligopeptidase A 0.51 DZA65_RS15485 fatty acid oxidation complex subunit alpha FadJ low > 75
Enterobacter asburiae PDN3 0.65 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.57 EX28DRAFT_0271 fatty oxidation complex, alpha subunit FadJ low > 76
Dickeya dianthicola 67-19 0.65 HGI48_RS00045 oligopeptidase A 0.50 HGI48_RS14550 fatty acid oxidation complex subunit alpha FadJ low > 71
Pectobacterium carotovorum WPP14 0.65 HER17_RS21300 oligopeptidase A 0.56 HER17_RS06890 fatty acid oxidation complex subunit alpha FadJ low > 75
Escherichia coli BW25113 0.65 b3498 prlC oligopeptidase A (NCBI) 0.57 b2341 yfcX fused enoyl-CoA hydratase and epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase (NCBI) low > 76
Escherichia coli ECOR38 0.65 HEPCGN_15325 prlC oligopeptidase A 0.57 HEPCGN_21755 fadJ fatty acid oxidation complex subunit alpha FadJ low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00205 Oligopeptidase A 0.58 OHPLBJKB_01365 Fatty acid oxidation complex subunit alpha low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.56 GFF1954 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 78
Escherichia coli ECRC102 0.64 NIAGMN_14180 prlC oligopeptidase A 0.57 NIAGMN_20335 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli ECRC98 0.64 JDDGAC_20045 prlC oligopeptidase A 0.57 JDDGAC_26520 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli BL21 0.64 ECD_03347 oligopeptidase A 0.57 ECD_02265 enoyl-CoA hydratase/epimerase and isomerase/3-hydroxyacyl-CoA dehydrogenase low > 60
Escherichia coli ECRC101 0.64 OKFHMN_16415 prlC oligopeptidase A 0.57 OKFHMN_22560 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli ECRC99 0.64 KEDOAH_11730 prlC oligopeptidase A 0.57 KEDOAH_05635 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli ECRC62 0.64 BNILDI_03210 prlC oligopeptidase A 0.57 BNILDI_13110 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Escherichia coli ECOR27 0.64 NOLOHH_08350 prlC oligopeptidase A 0.57 NOLOHH_14195 fadJ fatty acid oxidation complex subunit alpha FadJ low > 57
Escherichia coli ECRC101 0.64 MCAODC_06930 prlC oligopeptidase A 0.57 MCAODC_13590 fadJ fatty acid oxidation complex subunit alpha FadJ — —
Klebsiella michiganensis M5al 0.64 BWI76_RS26610 oligopeptidase A 0.56 BWI76_RS20455 multifunctional fatty acid oxidation complex subunit alpha low > 92
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19985 oligopeptidase A 0.57 ECOLIN_RS13550 fatty acid oxidation complex subunit alpha FadJ low > 52
Escherichia fergusonii Becca 0.64 EFB2_00317 Oligopeptidase A 0.56 EFB2_01518 Fatty acid oxidation complex subunit alpha low > 86
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0457 Zn-dependent oligopeptidases 0.55 B158DRAFT_1008 fatty oxidation complex, alpha subunit FadJ low > 40
Dechlorosoma suillum PS 0.50 Dsui_0046 Zn-dependent oligopeptidase 0.25 Dsui_0323 3-hydroxyacyl-CoA dehydrogenase low > 51
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS05695 M3 family metallopeptidase 0.24 QEN71_RS21890 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 153
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS12875 oligopeptidase A 0.25 BPHYT_RS09560 3-hydroxyacyl-CoA dehydrogenase low > 109
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_15380 dcp oligopeptidase A 0.26 OKGIIK_07915 3-hydroxyacyl-CoA dehydrogenase low > 52
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS14940 M3 family metallopeptidase 0.26 ABZR86_RS07195 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 74
Paraburkholderia graminis OAS925 0.48 ABIE53_002798 oligopeptidase A 0.25 ABIE53_002151 3-hydroxyacyl-CoA dehydrogenase low > 113
Rhodanobacter denitrificans MT42 0.48 LRK55_RS08380 M3 family metallopeptidase 0.26 LRK55_RS16640 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS08615 M3 family metallopeptidase 0.26 LRK54_RS16925 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.27 Xcc-8004.3683.1 Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 74
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS07340 oligopeptidase A 0.25 RR42_RS35270 3-hydroxyacyl-CoA dehydrogenase low > 128
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.26 H281DRAFT_00916 short chain enoyl-CoA hydratase /3-hydroxyacyl-CoA dehydrogenase low > 103
Ralstonia solanacearum GMI1000 0.46 RS_RS08035 oligopeptidase A 0.24 RS_RS08885 3-hydroxyacyl-CoA dehydrogenase low > 80
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS13490 M3 family metallopeptidase 0.30 ABZR87_RS23345 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 80
Ralstonia solanacearum UW163 0.46 UW163_RS15000 oligopeptidase A 0.24 UW163_RS14440 3-hydroxyacyl-CoA dehydrogenase — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS01690 oligopeptidase A 0.24 RALBFv3_RS01130 3-hydroxyacyl-CoA dehydrogenase low > 76
Ralstonia solanacearum PSI07 0.45 RPSI07_RS15795 oligopeptidase A 0.25 RPSI07_RS16345 3-hydroxyacyl-CoA dehydrogenase low > 81
Acidovorax sp. GW101-3H11 0.44 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) 0.24 Ac3H11_1931 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 79
Variovorax sp. OAS795 0.44 ABID97_RS14080 M3 family metallopeptidase 0.25 ABID97_RS15740 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein low > 91
Variovorax sp. SCN45 0.43 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.25 GFF1342 Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF4214 Oligopeptidase A (EC 3.4.24.70) 0.28 GFF875 Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) low > 90
Castellaniella sp019104865 MT123 0.43 ABCV34_RS04180 M3 family metallopeptidase 0.23 ABCV34_RS09055 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein — —

Not shown: 18 genomes with orthologs for Shewana3_4051 only; 13 genomes with orthologs for Shewana3_1461 only