Conservation of cofitness between Shewana3_4051 and Shewana3_0052 in Shewanella sp. ANA-3

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella sp. ANA-3 1.0 Shewana3_4051 oligopeptidase A (RefSeq) 1.0 Shewana3_0052 rhodanese domain-containing protein (RefSeq) 0.47 8
Shewanella oneidensis MR-1 0.95 SO4699 prlC oligopeptidase A (NCBI ptt file) 0.88 SO0050 rhodanese domain protein (NCBI ptt file) 0.41 64
Shewanella loihica PV-4 0.83 Shew_3657 oligopeptidase A (RefSeq) 0.72 Shew_3805 rhodanese domain-containing protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.80 Sama_3546 oligopeptidase A (RefSeq) 0.59 Sama_0061 rhodanese-like protein (RefSeq) low > 62
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_01010 oligopeptidase A 0.46 CSW01_13415 rhodanese-like domain-containing protein low > 62
Serratia liquefaciens MT49 0.67 IAI46_24210 oligopeptidase A 0.46 IAI46_24705 rhodanese-like domain-containing protein low > 86
Alteromonas macleodii MIT1002 0.67 MIT1002_03633 Oligopeptidase A 0.32 MIT1002_00488 Thiosulfate sulfurtransferase GlpE low > 70
Dickeya dadantii 3937 0.66 DDA3937_RS21265 oligopeptidase A 0.42 DDA3937_RS20415 rhodanese-like domain-containing protein low > 74
Rahnella sp. WP5 0.65 EX31_RS05165 oligopeptidase A 0.46 EX31_RS14355 rhodanese-like domain-containing protein low > 89
Pantoea sp. MT58 0.65 IAI47_01345 oligopeptidase A 0.39 IAI47_00725 rhodanese-like domain-containing protein low > 76
Enterobacter sp. TBS_079 0.65 MPMX20_04397 Oligopeptidase A 0.41 MPMX20_00122 putative protein YibN 0.31 3
Dickeya dianthicola ME23 0.65 DZA65_RS00035 oligopeptidase A 0.42 DZA65_RS00840 rhodanese-like domain-containing protein low > 75
Enterobacter asburiae PDN3 0.65 EX28DRAFT_4063 Zn-dependent oligopeptidases 0.42 EX28DRAFT_3862 Rhodanese-related sulfurtransferase low > 76
Dickeya dianthicola 67-19 0.65 HGI48_RS00045 oligopeptidase A 0.42 HGI48_RS00785 rhodanese-like domain-containing protein low > 71
Pectobacterium carotovorum WPP14 0.65 HER17_RS21300 oligopeptidase A 0.42 HER17_RS20745 rhodanese-like domain-containing protein low > 75
Escherichia coli ECOR38 0.65 HEPCGN_15325 prlC oligopeptidase A 0.40 HEPCGN_14580 yibN Uncharacterized protein YibN low > 85
Escherichia coli HS(pFamp)R (ATCC 700891) 0.65 OHPLBJKB_00205 Oligopeptidase A 0.40 OHPLBJKB_00088 putative protein YibN low > 73
Escherichia coli BW25113 0.65 b3498 prlC oligopeptidase A (NCBI) 0.40 b3611 yibN predicted rhodanese-related sulfurtransferase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.65 GFF517 Oligopeptidase A (EC 3.4.24.70) 0.40 GFF399 FIG136845: Rhodanese-related sulfurtransferase low > 78
Escherichia coli ECRC62 0.64 BNILDI_03210 prlC oligopeptidase A 0.40 BNILDI_03895 yibN Uncharacterized protein YibN — —
Escherichia coli ECRC101 0.64 OKFHMN_16415 prlC oligopeptidase A 0.40 OKFHMN_15740 yibN Uncharacterized protein YibN — —
Escherichia coli ECRC99 0.64 KEDOAH_11730 prlC oligopeptidase A 0.40 KEDOAH_12410 yibN Uncharacterized protein YibN — —
Escherichia coli ECRC102 0.64 NIAGMN_14180 prlC oligopeptidase A 0.40 NIAGMN_13500 yibN Uncharacterized protein YibN — —
Escherichia coli ECRC98 0.64 JDDGAC_20045 prlC oligopeptidase A 0.40 JDDGAC_19365 yibN Uncharacterized protein YibN — —
Escherichia coli BL21 0.64 ECD_03347 oligopeptidase A 0.40 ECD_03469 putative rhodanese-related sulfurtransferase low > 60
Escherichia coli ECRC101 0.64 MCAODC_06930 prlC oligopeptidase A 0.40 MCAODC_06250 yibN Uncharacterized protein YibN — —
Escherichia coli ECOR27 0.64 NOLOHH_08350 prlC oligopeptidase A 0.40 NOLOHH_07620 yibN Uncharacterized protein YibN low > 57
Escherichia coli Nissle 1917 0.64 ECOLIN_RS19985 oligopeptidase A 0.40 ECOLIN_RS20610 rhodanese-like domain-containing protein 0.53 50
Klebsiella michiganensis M5al 0.64 BWI76_RS26610 oligopeptidase A 0.41 BWI76_RS27225 rhodanese-like domain-containing protein 0.31 9
Escherichia fergusonii Becca 0.64 EFB2_00317 Oligopeptidase A 0.40 EFB2_00199 putative protein YibN low > 86
Erwinia tracheiphila SCR3 0.64 LU632_RS19470 prlC oligopeptidase A 0.40 LU632_RS21890 rhodanese-like domain-containing protein low > 74
Kangiella aquimarina DSM 16071 0.61 B158DRAFT_0457 Zn-dependent oligopeptidases 0.38 B158DRAFT_0709 Rhodanese-related sulfurtransferase low > 40
Pseudomonas sp. RS175 0.60 PFR28_04699 Oligopeptidase A 0.25 PFR28_04939 putative protein YibN low > 88
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) 0.22 Pf6N2E2_3831 FIG136845: Rhodanese-related sulfurtransferase — —
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) 0.23 PfGW456L13_352 FIG136845: Rhodanese-related sulfurtransferase low > 87
Pseudomonas fluorescens FW300-N2C3 0.59 AO356_11120 oligopeptidase A 0.22 AO356_09765 sulfurtransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.59 AO353_10775 oligopeptidase A 0.25 AO353_12120 sulfurtransferase — —
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS00240 oligopeptidase A 0.24 PFLU_RS01660 rhodanese-like domain-containing protein low > 109
Pseudomonas fluorescens SBW25 0.59 PFLU_RS00240 oligopeptidase A 0.24 PFLU_RS01660 rhodanese-like domain-containing protein low > 109
Pseudomonas simiae WCS417 0.59 PS417_00245 oligopeptidase A 0.24 PS417_01610 sulfurtransferase — —
Pseudomonas sp. S08-1 0.59 OH686_12360 Oligopeptidase A 0.26 OH686_14660 Rhodanese-related sulfurtransferase YibN low > 80
Pseudomonas stutzeri RCH2 0.59 Psest_4320 Zn-dependent oligopeptidases 0.22 Psest_0163 Rhodanese-related sulfurtransferase — —
Pseudomonas syringae pv. syringae B728a 0.59 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.21 Psyr_4884 Rhodanese-like protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.59 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A 0.21 Psyr_4884 Rhodanese-like protein low > 86
Pseudomonas putida KT2440 0.59 PP_0096 oligopeptidase A 0.20 PP_5055 Sulfurtransferase low > 96
Pseudomonas fluorescens FW300-N1B4 0.58 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) 0.24 Pf1N1B4_1616 FIG136845: Rhodanese-related sulfurtransferase — —
Marinobacter adhaerens HP15 0.57 HP15_3759 oligopeptidase A-like protein 0.25 HP15_3004 rhodanese domain protein low > 73
Dechlorosoma suillum PS 0.50 Dsui_0046 Zn-dependent oligopeptidase 0.27 Dsui_1273 Rhodanese-related sulfurtransferase low > 51
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS05695 M3 family metallopeptidase 0.24 QEN71_RS01450 rhodanese-like domain-containing protein low > 153
Rhodanobacter sp. FW510-T8 0.49 OKGIIK_15380 dcp oligopeptidase A 0.24 OKGIIK_16745 pspE rhodanese-like domain-containing protein low > 52
Dyella japonica UNC79MFTsu3.2 0.48 ABZR86_RS14940 M3 family metallopeptidase 0.24 ABZR86_RS16930 rhodanese-like domain-containing protein low > 74
Acinetobacter radioresistens SK82 0.48 MPMX26_02685 Oligopeptidase A 0.23 MPMX26_02632 putative protein YibN low > 36
Rhodanobacter denitrificans MT42 0.48 LRK55_RS08380 M3 family metallopeptidase 0.25 LRK55_RS06630 rhodanese-like domain-containing protein low > 63
Rhodanobacter denitrificans FW104-10B01 0.48 LRK54_RS08615 M3 family metallopeptidase 0.25 LRK54_RS06885 rhodanese-like domain-containing protein low > 59
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) 0.31 Xcc-8004.269.1 FIG136845: Rhodanese-related sulfurtransferase low > 74
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A 0.24 H281DRAFT_02003 Rhodanese-related sulfurtransferase low > 103
Ralstonia solanacearum PSI07 0.45 RPSI07_RS15795 oligopeptidase A 0.26 RPSI07_RS22405 rhodanese-like domain-containing protein low > 81
Variovorax sp. OAS795 0.44 ABID97_RS14080 M3 family metallopeptidase 0.24 ABID97_RS07390 rhodanese-like domain-containing protein low > 91
Variovorax sp. SCN45 0.43 GFF963 Oligopeptidase A (EC 3.4.24.70) 0.24 GFF2570 Rhodanese-related sulfurtransferase YibN low > 127

Not shown: 11 genomes with orthologs for Shewana3_4051 only; 1 genomes with orthologs for Shewana3_0052 only