Conservation of cofitness between Sama_3299 and Sama_2890 in Shewanella amazonensis SB2B

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_3299 branched-chain amino acid aminotransferase (RefSeq) 1.0 Sama_2890 Sulfate adenylyltransferase (RefSeq) 0.85 10
Shewanella sp. ANA-3 0.80 Shewana3_3830 branched-chain amino acid aminotransferase (RefSeq) 0.64 Shewana3_0864 cysN sulfate adenylyltransferase subunit 1 (RefSeq) 0.87 11
Shewanella oneidensis MR-1 0.80 SO0340 ilvE branched-chain amino acid aminotransferase (NCBI ptt file) 0.63 SO3726 cysN sulfate adenylyltransferase, subunit 1 (NCBI ptt file) 0.86 23
Shewanella loihica PV-4 0.80 Shew_0278 branched-chain amino acid aminotransferase (RefSeq) 0.59 Shew_1423 sulfate adenylyltransferase, large subunit (RefSeq) low > 60
Mucilaginibacter yixingensis YX-36 DSM 26809 0.36 ABZR88_RS22095 branched-chain amino acid aminotransferase 0.41 ABZR88_RS04935 sulfate adenylyltransferase subunit 1
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS18540 branched-chain amino acid aminotransferase 0.39 ABZR87_RS00190 sulfate adenylyltransferase subunit 1 low > 80
Ralstonia solanacearum UW163 0.35 UW163_RS18230 branched-chain amino acid aminotransferase 0.40 UW163_RS09090 sulfate adenylyltransferase subunit 1
Pedobacter sp. GW460-11-11-14-LB5 0.35 CA265_RS22650 branched chain amino acid aminotransferase 0.42 CA265_RS04120 sulfate adenylyltransferase 0.93 12
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS16875 branched-chain amino acid aminotransferase 0.40 RALBFv3_RS04580 sulfate adenylyltransferase subunit 1
Echinicola vietnamensis KMM 6221, DSM 17526 0.34 Echvi_2202 branched-chain amino acid aminotransferase, group II 0.36 Echvi_0982 sulfate adenylyltransferase, large subunit
Rhizobium sp. OAE497 0.33 ABIE40_RS11350 branched-chain amino acid aminotransferase 0.41 ABIE40_RS04465 sulfate adenylyltransferase subunit CysN low > 107
Cupriavidus basilensis FW507-4G11 0.33 RR42_RS25890 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.37 RR42_RS16250 sulfate adenylyltransferase low > 128
Ralstonia solanacearum GMI1000 0.32 RS_RS23675 branched-chain amino acid aminotransferase 0.39 RS_RS12150 sulfate adenylyltransferase subunit 1
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_00175 branched chain amino acid aminotransferase 0.44 CA264_02540 sulfate adenylyltransferase low > 74
Bacteroides stercoris CC31F 0.27 HMPREF1181_RS06865 branched-chain amino acid aminotransferase 0.50 HMPREF1181_RS04300 sulfate adenylyltransferase subunit CysN low > 56
Bacteroides ovatus ATCC 8483 0.26 BACOVA_01113 branched-chain-amino-acid transaminase 0.49 BACOVA_01769 putative sulfate adenylyltransferase subunit 1 low > 94
Bacteroides thetaiotaomicron VPI-5482 0.26 BT3892 branched-chain amino acid aminotransferase (NCBI ptt file) 0.49 BT0415 sulfate adenylyltransferase subunit 1/adenylylsulfate kinase (NCBI ptt file)
Phocaeicola dorei CL03T12C01 0.26 ABI39_RS01415 branched-chain amino acid aminotransferase 0.49 ABI39_RS02255 sulfate adenylyltransferase subunit CysN low > 72
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS02220 branched-chain amino acid aminotransferase 0.49 HMPREF1058_RS02940 sulfate adenylyltransferase subunit CysN low > 67
Parabacteroides merdae CL09T00C40 0.25 HMPREF1078_RS07855 branched-chain amino acid aminotransferase 0.49 HMPREF1078_RS01710 sulfate adenylyltransferase subunit CysN low > 61
Alteromonas macleodii MIT1002 0.19 MIT1002_00377 Branched-chain-amino-acid aminotransferase 2 0.62 MIT1002_01271 Sulfate adenylyltransferase subunit 1
Klebsiella michiganensis M5al 0.17 BWI76_RS00970 branched chain amino acid aminotransferase 0.63 BWI76_RS22695 sulfate adenylyltransferase low > 92
Dickeya dadantii 3937 0.17 DDA3937_RS20160 branched-chain-amino-acid transaminase 0.61 DDA3937_RS16920 sulfate adenylyltransferase subunit CysN 0.77 30
Dickeya dianthicola ME23 0.17 DZA65_RS21340 branched-chain amino acid transaminase 0.60 DZA65_RS18065 sulfate adenylyltransferase subunit CysN 0.63 51
Serratia liquefaciens MT49 0.17 IAI46_24350 branched-chain-amino-acid transaminase 0.64 IAI46_03720 sulfate adenylyltransferase subunit CysN low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.17 GFF2902 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.61 GFF4799 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 78
Escherichia coli ECRC101 0.17 OKFHMN_14645 ilvE branched-chain-amino-acid transaminase 0.62 OKFHMN_20445 cysN sulfate adenylyltransferase subunit CysN
Pantoea sp. MT58 0.17 IAI47_01030 branched-chain amino acid transaminase 0.63 IAI47_04185 sulfate adenylyltransferase subunit CysN low > 76
Escherichia coli ECRC62 0.17 BNILDI_04745 ilvE branched-chain-amino-acid transaminase 0.62 BNILDI_10810 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli ECRC99 0.17 KEDOAH_13505 ilvE branched-chain-amino-acid transaminase 0.62 KEDOAH_07695 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli ECRC98 0.17 JDDGAC_18265 ilvE branched-chain-amino-acid transaminase 0.62 JDDGAC_24110 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli ECRC101 0.17 MCAODC_05150 ilvE branched-chain-amino-acid transaminase 0.62 MCAODC_10970 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli BW25113 0.17 b3770 ilvE branched-chain amino acid aminotransferase (NCBI) 0.62 b2751 cysN sulfate adenylyltransferase subunit 1 (NCBI) 0.88 53
Escherichia coli ECRC102 0.17 NIAGMN_12400 ilvE branched-chain-amino-acid transaminase 0.62 NIAGMN_18215 cysN sulfate adenylyltransferase subunit CysN
Escherichia coli ECOR38 0.17 HEPCGN_13355 ilvE branched-chain-amino-acid transaminase 0.62 HEPCGN_19625 cysN sulfate adenylyltransferase subunit CysN low > 85
Escherichia fergusonii Becca 0.17 EFB2_04866 Branched-chain-amino-acid aminotransferase 0.62 EFB2_01159 Sulfate adenylyltransferase subunit 1 low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.17 OHPLBJKB_04283 Branched-chain-amino-acid aminotransferase 0.62 OHPLBJKB_00982 Sulfate adenylyltransferase subunit 1 low > 73
Escherichia coli ECOR27 0.17 NOLOHH_06780 ilvE branched-chain-amino-acid transaminase 0.62 NOLOHH_12260 cysN sulfate adenylyltransferase subunit CysN low > 57
Escherichia coli Nissle 1917 0.17 ECOLIN_RS21660 branched-chain-amino-acid transaminase 0.62 ECOLIN_RS15380 sulfate adenylyltransferase subunit CysN low > 52
Escherichia coli BL21 0.17 ECD_03648 branched-chain amino acid aminotransferase 0.61 ECD_02601 sulfate adenylyltransferase, subunit 1 low > 60
Rahnella sp. WP5 0.17 EX31_RS15000 branched-chain amino acid transaminase 0.63 EX31_RS07875 sulfate adenylyltransferase subunit CysN 0.86 53
Enterobacter sp. TBS_079 0.17 MPMX20_04500 Branched-chain-amino-acid aminotransferase 0.63 MPMX20_03637 Sulfate adenylyltransferase subunit 1 low > 85
Dickeya dianthicola 67-19 0.17 HGI48_RS20300 branched-chain-amino-acid transaminase 0.60 HGI48_RS16990 sulfate adenylyltransferase subunit CysN low > 71
Pectobacterium carotovorum WPP14 0.16 HER17_RS01070 branched-chain amino acid transaminase 0.61 HER17_RS04290 sulfate adenylyltransferase subunit CysN 0.82 61
Erwinia tracheiphila SCR3 0.16 LU632_RS24405 branched-chain amino acid transaminase 0.62 LU632_RS06430 cysN sulfate adenylyltransferase subunit CysN low > 74
Enterobacter asburiae PDN3 0.16 EX28DRAFT_4442 branched-chain amino acid aminotransferase, group I 0.64 EX28DRAFT_2847 sulfate adenylyltransferase, large subunit 0.79 22
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_00145 branched-chain-amino-acid transaminase 0.64 CSW01_12955 sulfate adenylyltransferase low > 62
Castellaniella sp019104865 MT123 0.14 ABCV34_RS07930 branched-chain amino acid transaminase 0.36 ABCV34_RS14120 GTP-binding protein low > 48
Dechlorosoma suillum PS 0.14 Dsui_3339 branched-chain amino acid aminotransferase, group I 0.45 Dsui_1982 sulfate adenylyltransferase, large subunit
Variovorax sp. OAS795 0.13 ABID97_RS03790 branched-chain amino acid transaminase 0.28 ABID97_RS15360 GTP-binding protein 0.35 43
Variovorax sp. SCN45 0.13 GFF5079 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.29 GFF1202 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) 0.59 127
Acidovorax sp. GW101-3H11 0.13 Ac3H11_3369 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.31 Ac3H11_573 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 79
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF1835 Branched-chain amino acid aminotransferase (EC 2.6.1.42) 0.33 GFF4289 Sulfate adenylyltransferase subunit 1 (EC 2.7.7.4) low > 90
Herbaspirillum seropedicae SmR1 0.12 HSERO_RS03330 branched-chain amino acid aminotransferase 0.40 HSERO_RS15570 sulfate adenylyltransferase low > 78
Ralstonia solanacearum PSI07 0.12 RPSI07_RS21175 branched-chain amino acid transaminase 0.40 RPSI07_RS12795 sulfate adenylyltransferase subunit 1 low > 81
Paraburkholderia sabiae LMG 24235 0.12 QEN71_RS02410 branched-chain amino acid transaminase 0.41 QEN71_RS25235 sulfate adenylyltransferase subunit 1 low > 153
Burkholderia phytofirmans PsJN 0.12 BPHYT_RS16285 Branched-chain amino acid aminotransferase (EC 2.6.1.42) (from data) 0.39 BPHYT_RS04745 sulfate adenylyltransferase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.12 H281DRAFT_04193 branched chain amino acid aminotransferase apoenzyme 0.39 H281DRAFT_00118 sulfate adenylyltransferase subunit 1 low > 103

Not shown: 32 genomes with orthologs for Sama_3299 only; 4 genomes with orthologs for Sama_2890 only