Conservation of cofitness between BT2944 and BT4043 in Bacteroides thetaiotaomicron VPI-5482

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT2944 putative UDP-N-acetylglucosamine 2-epimerase (NCBI ptt file) 1.0 BT4043 dimethyladenosine transferase (NCBI ptt file) 0.57 14
Pseudomonas sp. S08-1 0.62 OH686_14385 UDP-N-acetylglucosamine 2-epimerase 0.29 OH686_15040 ribosomal RNA small subunit methyltransferase A low > 80
Klebsiella michiganensis M5al 0.62 BWI76_RS01090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 BWI76_RS04520 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase — —
Kangiella aquimarina DSM 16071 0.62 B158DRAFT_2351 UDP-N-acetylglucosamine 2-epimerase 0.30 B158DRAFT_0788 dimethyladenosine transferase low > 40
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS21645 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.27 ABZR87_RS07710 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 80
Rahnella sp. WP5 0.61 EX31_RS15065 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 EX31_RS03780 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Enterobacter asburiae PDN3 0.61 EX28DRAFT_4456 UDP-N-acetylglucosamine 2-epimerase 0.25 EX28DRAFT_3645 ribosomal RNA small subunit methyltransferase A low > 76
Pantoea sp. MT58 0.61 IAI47_18510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 IAI47_16085 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 76
Erwinia tracheiphila SCR3 0.61 LU632_RS24240 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.23 LU632_RS02730 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS19090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 RALBFv3_RS11755 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 76
Ralstonia solanacearum UW163 0.61 UW163_RS20040 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 UW163_RS01830 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Pectobacterium carotovorum WPP14 0.60 HER17_RS01155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 HER17_RS02960 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 75
Vibrio cholerae E7946 ATCC 55056 0.60 CSW01_04705 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 CSW01_02325 ribosomal RNA small subunit methyltransferase A — —
Ralstonia solanacearum PSI07 0.60 RPSI07_RS04510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 RPSI07_RS21460 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 81
Ralstonia solanacearum GMI1000 0.60 RS_RS22030 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 RS_RS02580 ribosomal RNA small subunit methyltransferase A low > 80
Pseudomonas putida KT2440 0.60 PP_1811 UDP-N-acetylglucosamine-2-epimerase 0.30 PP_0401 Ribosomal RNA small subunit methyltransferase A low > 96
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_3995 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.31 PfGW456L13_1200 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Shewanella amazonensis SB2B 0.59 Sama_2261 UDP-N-acetylglucosamine 2-epimerase (RefSeq) 0.26 Sama_2819 ksgA dimethyladenosine transferase (RefSeq) — —
Escherichia coli ECRC102 0.59 NIAGMN_12325 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 NIAGMN_08685 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC99 0.59 KEDOAH_13580 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 KEDOAH_17320 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC101 0.59 OKFHMN_14570 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 OKFHMN_10835 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli BW25113 0.59 b3786 rffE UDP-N-acetyl glucosamine-2-epimerase (NCBI) 0.24 b0051 ksgA dimethyladenosine transferase (NCBI) low > 76
Escherichia coli ECRC62 0.59 BNILDI_04820 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 BNILDI_08425 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC98 0.59 JDDGAC_18195 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 JDDGAC_14430 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli ECRC101 0.59 MCAODC_05075 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 MCAODC_01350 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia fergusonii Becca 0.59 EFB2_04853 UDP-N-acetylglucosamine 2-epimerase 0.24 EFB2_03992 Ribosomal RNA small subunit methyltransferase A low > 86
Dickeya dadantii 3937 0.59 DDA3937_RS20055 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 DDA3937_RS18265 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Escherichia coli ECOR27 0.59 NOLOHH_06705 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 NOLOHH_03180 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA — —
Escherichia coli Nissle 1917 0.59 ECOLIN_RS21735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 ECOLIN_RS00285 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_04268 UDP-N-acetylglucosamine 2-epimerase 0.24 OHPLBJKB_03605 Ribosomal RNA small subunit methyltransferase A low > 73
Escherichia coli BL21 0.59 ECD_03664 UDP-N-acetyl glucosamine-2-epimerase 0.24 ECD_00055 16S rRNA m(6)A1518, m(6)A1519 dimethyltransferase, SAM-dependent — —
Serratia liquefaciens MT49 0.59 IAI46_00600 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 IAI46_03245 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.59 GFF2887 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.25 GFF190 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) low > 78
Escherichia coli ECOR38 0.59 HEPCGN_13280 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.24 HEPCGN_08825 rsmA 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA low > 85
Pseudomonas sp. RS175 0.58 PFR28_00916 UDP-N-acetylglucosamine 2-epimerase 0.31 PFR28_04064 Ribosomal RNA small subunit methyltransferase A low > 88
Dickeya dianthicola 67-19 0.58 HGI48_RS20200 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 HGI48_RS18200 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Dickeya dianthicola ME23 0.58 DZA65_RS21245 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 DZA65_RS19340 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA — —
Marinobacter adhaerens HP15 0.58 HP15_2382 UDP-N-acetylglucosamine 2-epimerase 0.27 HP15_3278 dimethyladenosine transferase low > 73
Sphingomonas koreensis DSMZ 15582 0.58 Ga0059261_3102 UDP-N-Acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.24 Ga0059261_0879 ribosomal RNA small subunit methyltransferase A — —
Enterobacter sp. TBS_079 0.58 MPMX20_04487 UDP-N-acetylglucosamine 2-epimerase 0.25 MPMX20_00747 Ribosomal RNA small subunit methyltransferase A low > 85
Pseudomonas stutzeri RCH2 0.57 Psest_0249 UDP-N-acetylglucosamine 2-epimerase 0.30 Psest_3668 dimethyladenosine transferase — —
Paraburkholderia sabiae LMG 24235 0.56 QEN71_RS40740 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.22 QEN71_RS02130 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.52 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase 0.31 Psyr_4627 dimethyladenosine transferase low > 86
Pseudomonas syringae pv. syringae B728a 0.52 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase 0.31 Psyr_4627 dimethyladenosine transferase low > 86
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_201 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) 0.30 Pf6N2E2_4805 SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase (EC 2.1.1.182) — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS21460 UDP-N-acetylglucosamine 2-epimerase 0.23 BPHYT_RS03305 ribosomal RNA small subunit methyltransferase A — —
Pseudomonas fluorescens FW300-N2C3 0.49 AO356_25630 UDP-N-acetylglucosamine 2-epimerase 0.30 AO356_14335 rRNA methyltransferase low > 104
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_01990 UDP-N-acetylglucosamine 2-epimerase 0.31 AO353_07315 rRNA methyltransferase low > 101
Paraburkholderia graminis OAS925 0.47 ABIE53_001712 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.23 ABIE53_000800 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase — —
Rhodospirillum rubrum S1H 0.41 Rru_A1493 UDP-N-acetylglucosamine 2-epimerase (NCBI) 0.21 Rru_A0431 16S rRNA dimethylase (NCBI) — —
Acinetobacter radioresistens SK82 0.40 MPMX26_00920 UDP-N-acetylglucosamine 2-epimerase 0.31 MPMX26_00596 Ribosomal RNA small subunit methyltransferase A — —
Dyella japonica UNC79MFTsu3.2 0.38 ABZR86_RS01495 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.25 ABZR86_RS11270 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.24 Echvi_1489 UDP-N-acetylglucosamine 2-epimerase 0.49 Echvi_0183 dimethyladenosine transferase low > 79
Variovorax sp. OAS795 0.22 ABID97_RS02160 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.26 ABID97_RS02525 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 91
Magnetospirillum magneticum AMB-1 0.21 AMB_RS00515 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.23 AMB_RS18820 dimethyladenosine transferase — —
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS19270 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.49 CA265_RS18315 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase low > 88
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS13765 UDP-N-acetylglucosamine 2-epimerase 0.29 HSERO_RS03540 dimethyladenosine transferase low > 78
Bacteroides stercoris CC31F 0.20 HMPREF1181_RS14875 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.90 HMPREF1181_RS09125 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA low > 56
Pontibacter actiniarum KMM 6156, DSM 19842 0.07 CA264_12445 UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) 0.52 CA264_03850 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase — —

Not shown: 2 genomes with orthologs for BT2944 only; 43 genomes with orthologs for BT4043 only