Conservation of cofitness between BT1150 and BT3712 in Bacteroides thetaiotaomicron VPI-5482

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT1150 conserved hypothetical protein (NCBI ptt file) 1.0 BT3712 ribosomal large subunit pseudouridine synthase D (NCBI ptt file) 0.29 3
Bacteroides ovatus ATCC 8483 0.90 BACOVA_04034 putative YigZ family protein 0.98 BACOVA_03528 pseudouridine synthase, RluA family low > 94
Bacteroides stercoris CC31F 0.81 HMPREF1181_RS16835 YigZ family protein 0.91 HMPREF1181_RS03250 RluA family pseudouridine synthase low > 56
Phocaeicola vulgatus CL09T03C04 0.79 HMPREF1058_RS01775 YigZ family protein 0.83 HMPREF1058_RS08615 RluA family pseudouridine synthase low > 67
Phocaeicola dorei CL03T12C01 0.79 ABI39_RS15290 YigZ family protein 0.83 ABI39_RS02845 RluA family pseudouridine synthase low > 72
Parabacteroides merdae CL09T00C40 0.64 HMPREF1078_RS00845 YigZ family protein 0.69 HMPREF1078_RS12640 RluA family pseudouridine synthase low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_00265 YigZ family protein 0.51 CA264_15205 RNA pseudouridine synthase low > 74
Echinicola vietnamensis KMM 6221, DSM 17526 0.49 Echvi_2819 Uncharacterized conserved protein 0.53 Echvi_0642 pseudouridine synthase, RluA family low > 79
Pedobacter sp. GW460-11-11-14-LB5 0.47 CA265_RS09540 YigZ family protein 0.54 CA265_RS14415 pseudouridine synthase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.41 ABZR88_RS10200 YigZ family protein 0.55 ABZR88_RS03985 RluA family pseudouridine synthase low > 71
Alteromonas macleodii MIT1002 0.28 MIT1002_00893 IMPACT family member YigZ 0.27 MIT1002_02679 Ribosomal large subunit pseudouridine synthase D low > 70
Lysobacter sp. OAE881 0.26 ABIE51_RS13780 YigZ family protein 0.28 ABIE51_RS04885 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 62
Cupriavidus basilensis FW507-4G11 0.25 RR42_RS36810 hypothetical protein 0.30 RR42_RS07590 pseudouridine synthase low > 128
Erwinia tracheiphila SCR3 0.25 LU632_RS23940 IMPACT family protein 0.24 LU632_RS16945 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 74
Rhodanobacter denitrificans MT42 0.24 LRK55_RS16840 YigZ family protein 0.28 LRK55_RS04745 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 63
Pantoea sp. MT58 0.24 IAI47_18220 IMPACT family protein 0.26 IAI47_04425 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 76
Rhodanobacter denitrificans FW104-10B01 0.24 LRK54_RS17130 IMPACT family protein 0.28 LRK54_RS04965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 59
Pseudomonas sp. RS175 0.24 PFR28_05259 IMPACT family member YigZ 0.27 PFR28_03748 Ribosomal large subunit pseudouridine synthase D low > 88
Pseudomonas fluorescens GW456-L13 0.24 PfGW456L13_6 FIG000605: protein co-occurring with transport systems (COG1739) 0.27 PfGW456L13_1493 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) — —
Dyella japonica UNC79MFTsu3.2 0.24 ABZR86_RS07050 YigZ family protein 0.27 ABZR86_RS10965 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 74
Ralstonia sp. UNC404CL21Col 0.23 ABZR87_RS03870 YigZ family protein 0.30 ABZR87_RS13315 RluA family pseudouridine synthase low > 80
Ralstonia solanacearum PSI07 0.23 RPSI07_RS08670 DUF1949 domain-containing protein 0.29 RPSI07_RS15970 RluA family pseudouridine synthase low > 81
Pseudomonas fluorescens FW300-N2C3 0.23 AO356_07970 thymidylate synthase 0.28 AO356_15925 ribosomal large subunit pseudouridine synthase D low > 104
Ralstonia solanacearum UW163 0.23 UW163_RS05055 DUF1949 domain-containing protein 0.30 UW163_RS14830 RluA family pseudouridine synthase — —
Ralstonia solanacearum IBSBF1503 0.23 RALBFv3_RS08555 DUF1949 domain-containing protein 0.30 RALBFv3_RS01520 RluA family pseudouridine synthase low > 76
Pseudomonas fluorescens FW300-N1B4 0.23 Pf1N1B4_1242 FIG000605: protein co-occurring with transport systems (COG1739) 0.28 Pf1N1B4_2822 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) — —
Ralstonia solanacearum GMI1000 0.23 RS_RS16420 DUF1949 domain-containing protein 0.29 RS_RS08205 RluA family pseudouridine synthase low > 80
Pseudomonas fluorescens SBW25-INTG 0.23 PFLU_RS03305 YigZ family protein 0.27 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 109
Pseudomonas fluorescens SBW25 0.23 PFLU_RS03305 YigZ family protein 0.27 PFLU_RS03870 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 109
Rhodanobacter sp. FW510-T8 0.23 OKGIIK_07755 yIH1 Thymidylate synthase 0.29 OKGIIK_01790 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 52
Rahnella sp. WP5 0.23 EX31_RS14555 IMPACT family protein 0.26 EX31_RS07570 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 89
Pseudomonas simiae WCS417 0.22 PS417_03225 thymidylate synthase 0.27 PS417_03820 ribosomal large subunit pseudouridine synthase D — —
Shewanella loihica PV-4 0.22 Shew_0021 hypothetical protein (RefSeq) 0.27 Shew_2950 RluA family pseudouridine synthase (RefSeq) low > 60
Methanococcus maripaludis S2 0.21 MMP_RS05490 IMPACT family protein 0.21 MMP_RS05225 RluA family pseudouridine synthase low > 25
Shewanella amazonensis SB2B 0.21 Sama_0034 hypothetical protein (RefSeq) 0.27 Sama_2605 pseudouridylate synthase (RefSeq) — —
Enterobacter asburiae PDN3 0.20 EX28DRAFT_4512 Uncharacterized conserved protein 0.27 EX28DRAFT_2695 pseudouridine synthase, RluA family low > 76
Methanococcus maripaludis JJ 0.20 MMJJ_RS08880 IMPACT family protein 0.22 MMJJ_RS09155 RluA family pseudouridine synthase low > 28
Hydrogenophaga sp. GW460-11-11-14-LB1 0.20 GFF1727 FIG000605: protein co-occurring with transport systems (COG1739) 0.24 GFF4870 Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) low > 90
Enterobacter sp. TBS_079 0.20 MPMX20_04434 IMPACT family member YigZ 0.26 MPMX20_03463 Ribosomal large subunit pseudouridine synthase D low > 85
Escherichia coli ECRC101 0.20 OKFHMN_14235 yigZ IMPACT family protein 0.27 OKFHMN_21250 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_04205 IMPACT family member YigZ 0.27 OHPLBJKB_01112 Ribosomal large subunit pseudouridine synthase D low > 73
Escherichia coli ECRC99 0.20 KEDOAH_13915 yigZ IMPACT family protein 0.27 KEDOAH_06970 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC102 0.20 NIAGMN_11990 yigZ IMPACT family protein 0.27 NIAGMN_19020 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia fergusonii Becca 0.20 EFB2_04769 IMPACT family member YigZ 0.27 EFB2_01296 Ribosomal large subunit pseudouridine synthase D low > 86
Escherichia coli Nissle 1917 0.20 ECOLIN_RS22190 IMPACT family protein 0.27 ECOLIN_RS14675 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 52
Escherichia coli ECRC98 0.20 JDDGAC_17860 yigZ IMPACT family protein 0.27 JDDGAC_24915 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC101 0.20 MCAODC_04740 yigZ IMPACT family protein 0.27 MCAODC_11780 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli ECRC62 0.19 BNILDI_05165 yigZ IMPACT family protein 0.27 BNILDI_11730 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD — —
Escherichia coli BL21 0.19 ECD_03739 UPF0029 family protein 0.27 ECD_02484 23S rRNA pseudouridine(1911,1915,1917) synthase low > 60
Escherichia coli ECOR27 0.19 NOLOHH_06365 yigZ IMPACT family protein 0.27 NOLOHH_12925 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 57
Escherichia coli ECOR38 0.19 HEPCGN_12865 yigZ IMPACT family protein 0.27 HEPCGN_20375 rluD 23S rRNA pseudouridine(1911/1915/1917) synthase RluD low > 85
Escherichia coli BW25113 0.19 b3848 yigZ orf, hypothetical protein (VIMSS) 0.27 b2594 rluD 23S rRNA pseudouridine synthase (NCBI) — —
Klebsiella michiganensis M5al 0.18 BWI76_RS01380 YigZ family protein 0.27 BWI76_RS21450 23S rRNA pseudouridine(1911/1915/1917) synthase low > 92

Not shown: 0 genomes with orthologs for BT1150 only; 41 genomes with orthologs for BT3712 only