Conservation of cofitness between b3616 and b3871 in Escherichia coli BW25113

48 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b3616 tdh L-threonine 3-dehydrogenase (NCBI) 1.0 b3871 bipA GTP-binding protein (NCBI) 0.36 10
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00083 L-threonine 3-dehydrogenase 1.00 OHPLBJKB_04181 GTP-binding protein TypA/BipA low > 73
Escherichia coli BL21 1.00 ECD_03474 L-threonine 3-dehydrogenase, NAD(P)-binding 1.00 ECD_03756 GTP-binding protein low > 60
Escherichia coli ECOR27 1.00 NOLOHH_07595 tdh L-threonine 3-dehydrogenase 1.00 NOLOHH_06220 typA ribosome-dependent GTPase TypA low > 57
Escherichia fergusonii Becca 1.00 EFB2_00194 L-threonine 3-dehydrogenase 1.00 EFB2_04745 GTP-binding protein TypA/BipA low > 86
Escherichia coli ECOR38 1.00 HEPCGN_14555 tdh L-threonine 3-dehydrogenase 1.00 HEPCGN_12720 typA ribosome-dependent GTPase TypA low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20635 L-threonine 3-dehydrogenase 1.00 ECOLIN_RS22315 ribosome-dependent GTPase TypA low > 52
Escherichia coli ECRC62 0.99 BNILDI_03920 tdh L-threonine 3-dehydrogenase 1.00 BNILDI_05310 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 0.99 MCAODC_06225 tdh L-threonine 3-dehydrogenase 1.00 MCAODC_04590 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC101 0.99 OKFHMN_15715 tdh L-threonine 3-dehydrogenase 1.00 OKFHMN_14090 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC102 0.99 NIAGMN_13475 tdh L-threonine 3-dehydrogenase 1.00 NIAGMN_11845 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC98 0.99 JDDGAC_19340 tdh L-threonine 3-dehydrogenase 1.00 JDDGAC_17715 typA ribosome-dependent GTPase TypA — —
Escherichia coli ECRC99 0.99 KEDOAH_12435 tdh L-threonine 3-dehydrogenase 1.00 KEDOAH_14060 typA ribosome-dependent GTPase TypA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.98 GFF394 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.97 GFF2223 GTP-binding protein TypA/BipA low > 78
Klebsiella michiganensis M5al 0.98 BWI76_RS27250 L-threonine 3-dehydrogenase 0.95 BWI76_RS00410 translational GTPase TypA — —
Enterobacter asburiae PDN3 0.97 EX28DRAFT_3869 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.95 EX28DRAFT_4353 GTP-binding protein TypA/BipA — —
Enterobacter sp. TBS_079 0.97 MPMX20_00116 L-threonine 3-dehydrogenase 0.96 MPMX20_04594 GTP-binding protein TypA/BipA — —
Serratia liquefaciens MT49 0.95 IAI46_24725 L-threonine 3-dehydrogenase 0.93 IAI46_24945 ribosome-dependent GTPase TypA low > 86
Rahnella sp. WP5 0.91 EX31_RS14385 L-threonine 3-dehydrogenase 0.90 EX31_RS15865 ribosome-dependent GTPase TypA low > 89
Shewanella amazonensis SB2B 0.90 Sama_0097 tdh L-threonine 3-dehydrogenase (RefSeq) 0.79 Sama_3415 virulence regulator BipA (RefSeq) low > 62
Pantoea sp. MT58 0.90 IAI47_00700 L-threonine 3-dehydrogenase 0.93 IAI47_00465 ribosome-dependent GTPase TypA low > 76
Vibrio cholerae E7946 ATCC 55056 0.90 CSW01_18565 L-threonine 3-dehydrogenase 0.78 CSW01_13840 translational GTPase TypA low > 62
Shewanella oneidensis MR-1 0.89 SO4673 tdh threonine 3-dehydrogenase (NCBI ptt file) 0.78 SO4408 bipA virulence regulator BipA (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.89 Shewana3_4105 tdh L-threonine 3-dehydrogenase (RefSeq) 0.78 Shewana3_0301 GTP-binding protein TypA (RefSeq) low > 73
Shewanella loihica PV-4 0.89 Shew_3710 tdh L-threonine 3-dehydrogenase (RefSeq) 0.80 Shew_3553 GTP-binding protein TypA (RefSeq) low > 60
Pectobacterium carotovorum WPP14 0.89 HER17_RS20760 L-threonine 3-dehydrogenase 0.91 HER17_RS21425 ribosome-dependent GTPase TypA low > 75
Alteromonas macleodii MIT1002 0.87 MIT1002_00064 L-threonine 3-dehydrogenase 0.77 MIT1002_03181 hypothetical protein low > 70
Dickeya dadantii 3937 0.86 DDA3937_RS20430 L-threonine 3-dehydrogenase 0.91 DDA3937_RS00140 ribosome-dependent GTPase TypA low > 74
Paraburkholderia sabiae LMG 24235 0.81 QEN71_RS16540 L-threonine 3-dehydrogenase 0.65 QEN71_RS23065 translational GTPase TypA — —
Cupriavidus basilensis FW507-4G11 0.81 RR42_RS22860 l-threonine 3-dehydrogenase 0.63 RR42_RS12810 GTP-binding protein — —
Burkholderia phytofirmans PsJN 0.80 BPHYT_RS34650 l-threonine 3-dehydrogenase 0.64 BPHYT_RS08105 GTP-binding protein — —
Castellaniella sp019104865 MT123 0.79 ABCV34_RS14100 L-threonine 3-dehydrogenase 0.61 ABCV34_RS02140 translational GTPase TypA — —
Paraburkholderia bryophila 376MFSha3.1 0.79 H281DRAFT_03586 L-threonine 3-dehydrogenase 0.65 H281DRAFT_05111 GTP-binding protein — —
Kangiella aquimarina DSM 16071 0.79 B158DRAFT_0285 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.77 B158DRAFT_0725 GTP-binding protein TypA/BipA low > 40
Paraburkholderia graminis OAS925 0.78 ABIE53_004673 threonine 3-dehydrogenase 0.65 ABIE53_002454 GTP-binding protein — —
Sinorhizobium meliloti 1021 0.73 SMc01564 L-threonine 3-dehydrogenase 0.53 SMc03242 GTP-binding protein low > 103
Rhizobium sp. OAE497 0.73 ABIE40_RS12725 L-threonine 3-dehydrogenase 0.54 ABIE40_RS18125 translational GTPase TypA low > 107
Rhodanobacter sp. FW510-T8 0.68 OKGIIK_06605 tdh L-threonine 3-dehydrogenase 0.68 OKGIIK_06470 typA translational GTPase TypA — —
Rhodanobacter denitrificans MT42 0.68 LRK55_RS00420 L-threonine 3-dehydrogenase 0.69 LRK55_RS00550 translational GTPase TypA low > 63
Rhodanobacter denitrificans FW104-10B01 0.68 LRK54_RS00650 L-threonine 3-dehydrogenase 0.69 LRK54_RS00775 translational GTPase TypA low > 59
Dyella japonica UNC79MFTsu3.2 0.67 ABZR86_RS08385 L-threonine 3-dehydrogenase 0.69 ABZR86_RS20640 translational GTPase TypA low > 74
Lysobacter sp. OAE881 0.67 ABIE51_RS06140 L-threonine 3-dehydrogenase 0.68 ABIE51_RS05990 translational GTPase TypA low > 62
Xanthomonas campestris pv. campestris strain 8004 0.67 Xcc-8004.4082.1 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.70 Xcc-8004.4106.1 GTP-binding protein TypA/BipA — —
Phaeobacter inhibens DSM 17395 0.60 PGA1_c34320 L-threonine 3-dehydrogenase (EC 1.1.1.103) (from data) 0.51 PGA1_c15300 GTP-binding protein TypA low > 62
Sphingomonas koreensis DSMZ 15582 0.59 Ga0059261_2605 Threonine dehydrogenase and related Zn-dependent dehydrogenases 0.55 Ga0059261_0817 GTP-binding protein TypA/BipA low > 68
Brevundimonas sp. GW460-12-10-14-LB2 0.57 A4249_RS02510 L-threonine 3-dehydrogenase 0.49 A4249_RS13585 translational GTPase TypA — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.22 GFF1899 L-threonine 3-dehydrogenase (EC 1.1.1.103) 0.58 GFF4346 GTP-binding protein TypA/BipA 0.47 62
Pseudomonas simiae WCS417 0.21 PS417_15850 alcohol dehydrogenase 0.70 PS417_01665 GTP-binding protein TypA — —
Rhodopseudomonas palustris CGA009 0.17 TX73_000550 zinc-binding dehydrogenase 0.53 TX73_002120 translational GTPase TypA low > 86

Not shown: 0 genomes with orthologs for b3616 only; 52 genomes with orthologs for b3871 only