Conservation of cofitness between b2744 and b4472 in Escherichia coli BW25113

52 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BW25113 1.0 b2744 surE acid phosphatase (NCBI) 1.0 b4472 yhdP conserved membrane protein, predicted transporter (NCBI) 0.22 14
Escherichia coli ECRC102 1.00 NIAGMN_18250 surE 5'/3'-nucleotidase SurE 0.99 NIAGMN_15510 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC98 1.00 JDDGAC_24145 surE 5'/3'-nucleotidase SurE 0.99 JDDGAC_21375 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli BL21 1.00 ECD_02594 broad specificity 5'(3')-nucleotidase and polyphosphatase 0.99 ECD_03105 DUF3971-AsmA2 domains protein low > 60
Escherichia coli ECRC101 1.00 MCAODC_11005 surE 5'/3'-nucleotidase SurE 0.99 MCAODC_08270 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC99 1.00 KEDOAH_07660 surE 5'/3'-nucleotidase SurE 0.99 KEDOAH_10400 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC62 1.00 BNILDI_10845 surE 5'/3'-nucleotidase SurE 1.00 BNILDI_01985 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli ECRC101 1.00 OKFHMN_20480 surE 5'/3'-nucleotidase SurE 0.99 OKFHMN_17750 yhdP AsmA2 domain-containing protein YhdP — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00989 '5'/3'-nucleotidase SurE' transl_table=11 0.99 OHPLBJKB_00459 hypothetical protein low > 73
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15345 5'/3'-nucleotidase SurE 0.99 ECOLIN_RS18600 AsmA2 domain-containing protein YhdP 0.70 7
Escherichia fergusonii Becca 1.00 EFB2_01166 5'/3'-nucleotidase SurE 0.99 EFB2_00585 hypothetical protein low > 86
Escherichia coli ECOR27 1.00 NOLOHH_12295 surE 5'/3'-nucleotidase SurE 1.00 NOLOHH_09535 yhdP AsmA2 domain-containing protein YhdP low > 57
Escherichia coli ECOR38 0.99 HEPCGN_19660 surE 5'/3'-nucleotidase SurE 0.99 HEPCGN_16615 yhdP AsmA2 domain-containing protein YhdP low > 85
Enterobacter asburiae PDN3 0.92 EX28DRAFT_2840 3'-nucleotidase (EC 3.1.3.6)/5'-nucleotidase (EC 3.1.3.5)/exopolyphosphatase (EC 3.6.1.11) 0.79 EX28DRAFT_3296 TIGR02099 family protein low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03630 5'/3'-nucleotidase SurE 0.78 MPMX20_04152 hypothetical protein low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF4792 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.83 GFF2139 FIG005080: Possible exported protein low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS22660 5'/3'-nucleotidase SurE 0.76 BWI76_RS25475 TIGR02099 family protein low > 92
Pantoea sp. MT58 0.87 IAI47_04220 5'/3'-nucleotidase SurE 0.55 IAI47_02460 AsmA2 domain-containing protein YhdP low > 76
Erwinia tracheiphila SCR3 0.85 LU632_RS06465 surE 5'/3'-nucleotidase SurE 0.57 LU632_RS21425 yhdP AsmA2 domain-containing protein YhdP low > 74
Serratia liquefaciens MT49 0.83 IAI46_03775 5'/3'-nucleotidase SurE 0.56 IAI46_22695 AsmA2 domain-containing protein YhdP low > 86
Rahnella sp. WP5 0.79 EX31_RS07840 5'/3'-nucleotidase SurE 0.55 EX31_RS12260 AsmA2 domain-containing protein low > 89
Shewanella sp. ANA-3 0.57 Shewana3_1121 surE stationary phase survival protein SurE (RefSeq) 0.14 Shewana3_3643 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.56 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) 0.14 SO4093 conserved hypothetical protein (NCBI ptt file) low > 76
Vibrio cholerae E7946 ATCC 55056 0.55 CSW01_02820 5'-nucleotidase SurE 0.17 CSW01_02210 DUF3971 domain-containing protein low > 62
Shewanella loihica PV-4 0.54 Shew_1210 stationary-phase survival protein SurE (RefSeq) 0.15 Shew_0408 hypothetical protein (RefSeq) low > 60
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS06595 5'/3'-nucleotidase SurE 0.08 ABZR86_RS21725 YhdP family protein low > 74
Rhodanobacter sp. FW510-T8 0.53 OKGIIK_08115 surE 5'/3'-nucleotidase SurE 0.08 OKGIIK_10285 TIGR02099 family protein — —
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.3131.1 hypothetical protein 0.05 Xcc-8004.1881.1 FIG005080: Possible exported protein low > 74
Pseudomonas sp. S08-1 0.45 OH686_18170 5'/3'-nucleotidase SurE 0.07 OH686_08590 Possible exported protein — —
Pseudomonas stutzeri RCH2 0.45 Psest_2810 5'/3'-nucleotidase SurE 0.05 Psest_3322 TIGR02099 family protein low > 67
Pseudomonas putida KT2440 0.44 PP_1620 5'(3')-nucleotidase and polyphosphatase 0.07 PP_0938 conserved protein of unknown function low > 96
Pseudomonas syringae pv. syringae B728a ΔmexB 0.44 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.08 Psyr_4158 conserved hypothetical protein low > 86
Variovorax sp. SCN45 0.44 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) 0.07 GFF5444 FIG005080: Possible exported protein low > 127
Pseudomonas syringae pv. syringae B728a 0.44 Psyr_1371 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase 0.08 Psyr_4158 conserved hypothetical protein low > 86
Dechlorosoma suillum PS 0.44 Dsui_1968 5''/3''-nucleotidase SurE 0.10 Dsui_3403 TIGR02099 family protein — —
Variovorax sp. OAS795 0.44 ABID97_RS10715 5'/3'-nucleotidase SurE 0.07 ABID97_RS02005 YhdP family protein low > 91
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_16600 stationary phase survival protein SurE 0.07 AO353_05225 hypothetical protein low > 101
Pseudomonas fluorescens FW300-N1B4 0.43 Pf1N1B4_3112 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.08 Pf1N1B4_1094 FIG005080: Possible exported protein low > 87
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS06415 5'/3'-nucleotidase SurE 0.07 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas fluorescens SBW25 0.43 PFLU_RS06415 5'/3'-nucleotidase SurE 0.07 PFLU_RS04330 TIGR02099 family protein low > 109
Pseudomonas simiae WCS417 0.43 PS417_06350 stationary phase survival protein SurE 0.08 PS417_04275 hypothetical protein low > 88
Herbaspirillum seropedicae SmR1 0.43 HSERO_RS14845 stationary phase survival protein SurE 0.07 HSERO_RS07145 hypothetical protein low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.43 GFF3879 5-nucleotidase SurE (EC 3.1.3.5) 0.07 GFF2534 FIG005080: Possible exported protein low > 90
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_4678 5-nucleotidase SurE (EC 3.1.3.5) @ Exopolyphosphatase (EC 3.6.1.11) 0.07 PfGW456L13_5028 FIG005080: Possible exported protein low > 87
Ralstonia solanacearum PSI07 0.42 RPSI07_RS18155 5'/3'-nucleotidase SurE 0.08 RPSI07_RS11860 TIGR02099 family protein low > 81
Ralstonia solanacearum GMI1000 0.42 RS_RS06030 5'-nucleotidase SurE 0.08 RS_RS13305 TIGR02099 family protein low > 80
Ralstonia sp. UNC404CL21Col 0.42 ABZR87_RS10860 5'/3'-nucleotidase SurE 0.08 ABZR87_RS01095 YhdP family protein — —
Ralstonia solanacearum IBSBF1503 0.42 RALBFv3_RS15220 5'/3'-nucleotidase SurE 0.05 RALBFv3_RS05445 TIGR02099 family protein low > 76
Ralstonia solanacearum UW163 0.42 UW163_RS12685 5'/3'-nucleotidase SurE 0.05 UW163_RS08180 TIGR02099 family protein — —
Acidovorax sp. GW101-3H11 0.41 Ac3H11_1784 5-nucleotidase SurE (EC 3.1.3.5) 0.07 Ac3H11_1208 FIG005080: Possible exported protein low > 79
Pseudomonas fluorescens FW300-N2E2 0.40 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) 0.07 Pf6N2E2_3282 FIG005080: Possible exported protein low > 103
Pseudomonas sp. RS175 0.40 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 0.06 PFR28_00159 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_05900 stationary phase survival protein SurE 0.06 AO356_07105 hypothetical protein low > 104

Not shown: 43 genomes with orthologs for b2744 only; 5 genomes with orthologs for b4472 only