| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodospirillum rubrum S1H | 1.0 | Rru_A1158 | | Osmosensitive K+ channel Signal Transduction Histidine Kinase (NCBI) | 1.0 | Rru_A2052 | | RND efflux system, outer membrane lipoprotein, NodT (NCBI) | 0.61 | 2 |
| Agrobacterium fabrum C58 | 0.47 | Atu3787 | | two component sensor kinase | 0.16 | Atu2552 | | nodulation protein T precursor | — | — |
| Rhizobium sp. OAE497 | 0.46 | ABIE40_RS24610 | | sensor histidine kinase KdpD | 0.19 | ABIE40_RS15365 | | efflux transporter outer membrane subunit | — | — |
| Bosea sp. OAE506 | 0.46 | ABIE41_RS24230 | | sensor histidine kinase KdpD | 0.20 | ABIE41_RS01590 | | efflux transporter outer membrane subunit | low | > 77 |
| Pseudomonas fluorescens FW300-N2E2 | 0.39 | Pf6N2E2_2491 | | Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) | 0.47 | Pf6N2E2_2825 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 103 |
| Pseudomonas fluorescens FW300-N2C3 | 0.39 | AO356_03300 | | histidine kinase | 0.48 | AO356_30435 | | multidrug transporter | low | > 104 |
| Pseudomonas sp. RS175 | 0.39 | PFR28_00942 | | Sensor protein KdpD | 0.48 | PFR28_00630 | | putative efflux pump outer membrane protein TtgC | 0.24 | 10 |
| Pseudomonas putida KT2440 | 0.38 | PP_4158 | | sensor protein | 0.48 | PP_1384 | | Probable efflux pump outer membrane protein TtgC | low | > 96 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.38 | Psyr_2050 | | ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA | 0.49 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.38 | Psyr_2050 | | ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA | 0.49 | Psyr_4009 | | RND efflux system, outer membrane lipoprotein, NodT | low | > 86 |
| Pseudomonas fluorescens GW456-L13 | 0.38 | PfGW456L13_2204 | | Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) | 0.47 | PfGW456L13_4582 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 87 |
| Pseudomonas simiae WCS417 | 0.37 | PS417_08300 | | histidine kinase | 0.46 | PS417_06765 | | multidrug transporter | — | — |
| Caulobacter crescentus NA1000 Δfur | 0.37 | CCNA_01666 | | osmosensitive K+ channel histidine kinase kdpD | 0.42 | CCNA_00849 | | outer membrane efflux protein | low | > 67 |
| Caulobacter crescentus NA1000 | 0.37 | CCNA_01666 | | osmosensitive K+ channel histidine kinase kdpD | 0.42 | CCNA_00849 | | outer membrane efflux protein | low | > 66 |
| Pseudomonas fluorescens FW300-N1B4 | 0.37 | Pf1N1B4_312 | | Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) | 0.48 | Pf1N1B4_3245 | | RND efflux system, outer membrane lipoprotein, NodT family | — | — |
| Pseudomonas fluorescens SBW25 | 0.37 | PFLU_RS08240 | | sensor histidine kinase KdpD | 0.47 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.37 | PFLU_RS08240 | | sensor histidine kinase KdpD | 0.47 | PFLU_RS06800 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 109 |
| Pseudomonas sp. S08-1 | 0.37 | OH686_01890 | | Osmosensitive K+ channel histidine kinase KdpD | 0.46 | OH686_16055 | | Multidrug efflux system, outer membrane factor lipoprotein | low | > 80 |
| Dyella japonica UNC79MFTsu3.2 | 0.37 | ABZR86_RS13210 | | sensor histidine kinase KdpD | 0.46 | ABZR86_RS18290 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 74 |
| Pseudomonas fluorescens FW300-N2E3 | 0.36 | AO353_18930 | | histidine kinase | 0.49 | AO353_17290 | | multidrug transporter | low | > 101 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.36 | Xcc-8004.4379.1 | | Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) | 0.45 | Xcc-8004.1795.1 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 74 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF4474 | | Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) | 0.35 | GFF3841 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 90 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.35 | H281DRAFT_04532 | | two-component system, OmpR family, sensor histidine kinase KdpD | 0.43 | H281DRAFT_04169 | | outer membrane protein, multidrug efflux system | low | > 103 |
| Paraburkholderia sabiae LMG 24235 | 0.35 | QEN71_RS24345 | | DUF4118 domain-containing protein | 0.43 | QEN71_RS29860 | | efflux transporter outer membrane subunit | low | > 153 |
| Burkholderia phytofirmans PsJN | 0.35 | BPHYT_RS06460 | | histidine kinase | 0.41 | BPHYT_RS16165 | | multidrug transporter | — | — |
| Serratia liquefaciens MT49 | 0.34 | IAI46_06165 | | two-component system sensor histidine kinase KdbD | 0.43 | IAI46_16730 | | efflux transporter outer membrane subunit | low | > 86 |
| Enterobacter sp. TBS_079 | 0.34 | MPMX20_01338 | | Sensor protein KdpD | 0.31 | MPMX20_00056 | | Outer membrane protein OprM | low | > 85 |
| Rahnella sp. WP5 | 0.34 | EX31_RS23335 | | two-component system sensor histidine kinase KdbD | 0.44 | EX31_RS13330 | | efflux transporter outer membrane subunit | low | > 89 |
| Enterobacter asburiae PDN3 | 0.34 | EX28DRAFT_2283 | | Osmosensitive K+ channel histidine kinase | 0.32 | EX28DRAFT_3935 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 76 |
| Klebsiella michiganensis M5al | 0.34 | BWI76_RS08305 | | two-component sensor histidine kinase | 0.32 | BWI76_RS27700 | | multidrug transporter | low | > 92 |
| Escherichia coli Nissle 1917 | 0.33 | ECOLIN_RS03755 | | two-component system sensor histidine kinase KdpD | 0.32 | ECOLIN_RS03130 | | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia coli ECOR27 | 0.33 | NOLOHH_23455 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | NOLOHH_24080 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 75 |
| Escherichia coli ECRC101 | 0.33 | MCAODC_26290 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | MCAODC_26915 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 87 |
| Escherichia coli ECRC99 | 0.33 | KEDOAH_20895 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | KEDOAH_20270 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia coli ECRC100 | 0.33 | OKFHMN_07075 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | OKFHMN_07700 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 80 |
| Escherichia coli ECRC98 | 0.33 | JDDGAC_10725 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | JDDGAC_11345 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 86 |
| Escherichia coli ECRC102 | 0.33 | NIAGMN_05130 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | NIAGMN_05755 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | — | — |
| Escherichia coli BW25113 | 0.33 | b0695 | kdpD | fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) | 0.32 | b0572 | cusC | copper/silver efflux system, outer membrane component (NCBI) | low | > 76 |
| Escherichia fergusonii Becca | 0.33 | EFB2_03401 | | Sensor protein KdpD | 0.32 | EFB2_03522 | | Cation efflux system protein CusC | low | > 86 |
| Escherichia coli BL21 | 0.33 | ECD_00652 | | fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein | 0.32 | ECD_00533 | | copper/silver efflux system, outer membrane component | low | > 61 |
| Escherichia coli ECOR38 | 0.33 | HEPCGN_01160 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | HEPCGN_00590 | ibeB | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.33 | OHPLBJKB_03022 | | Sensor protein KdpD | 0.32 | OHPLBJKB_03137 | | Cation efflux system protein CusC | low | > 73 |
| Escherichia coli ECRC62 | 0.33 | BNILDI_21460 | kdpD | two-component system sensor histidine kinase KdpD | 0.32 | BNILDI_22090 | cusC | Cu(+)/Ag(+) efflux RND transporter outer membrane channel CusC | low | > 75 |
| Dickeya dianthicola 67-19 | 0.33 | HGI48_RS06415 | | two-component system sensor histidine kinase KdpD | 0.35 | HGI48_RS14115 | | efflux transporter outer membrane subunit | 0.55 | 5 |
| Pectobacterium carotovorum WPP14 | 0.33 | HER17_RS15045 | | two-component system sensor histidine kinase KdpD | 0.17 | HER17_RS07525 | | efflux transporter outer membrane subunit | low | > 75 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.33 | GFF4607 | | Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) | 0.39 | GFF4245 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 78 |
| Dickeya dianthicola ME23 | 0.32 | DZA65_RS06760 | | two-component system sensor histidine kinase KdbD | 0.29 | DZA65_RS03600 | | efflux transporter outer membrane subunit | low | > 75 |
| Herbaspirillum seropedicae SmR1 | 0.32 | HSERO_RS18855 | | sensor protein KdpD | 0.45 | HSERO_RS06820 | | multidrug transporter | low | > 78 |
| Dickeya dadantii 3937 | 0.32 | DDA3937_RS06370 | | two-component system sensor histidine kinase KdpD | 0.35 | DDA3937_RS14115 | | efflux transporter outer membrane subunit | low | > 74 |
| Cupriavidus basilensis FW507-4G11 | 0.32 | RR42_RS00495 | | histidine kinase | 0.43 | RR42_RS36970 | | RND transporter | low | > 128 |
| Pantoea sp. MT58 | 0.32 | IAI47_01250 | | two-component system sensor histidine kinase KdbD | 0.20 | IAI47_12395 | | efflux transporter outer membrane subunit | low | > 76 |
| Ralstonia solanacearum GMI1000 | 0.31 | RS_RS16960 | | sensor histidine kinase KdpD | 0.44 | RS_RS21025 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | low | > 80 |
| Ralstonia solanacearum PSI07 | 0.31 | RPSI07_RS08140 | | sensor histidine kinase KdpD | 0.46 | RPSI07_RS03385 | | AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor | low | > 81 |
| Ralstonia solanacearum UW163 | 0.31 | UW163_RS04465 | | sensor histidine kinase KdpD | 0.45 | UW163_RS19375 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.31 | RALBFv3_RS09130 | | sensor histidine kinase KdpD | 0.45 | RALBFv3_RS19800 | | adeC/adeK/oprM family multidrug efflux complex outer membrane factor | low | > 76 |
| Acinetobacter radioresistens SK82 | 0.31 | MPMX26_02241 | | Sensor protein KdpD | 0.35 | MPMX26_00688 | | Outer membrane protein OprM | — | — |
| Sphingomonas koreensis DSMZ 15582 | 0.31 | Ga0059261_3881 | | Osmosensitive K+ channel histidine kinase | 0.32 | Ga0059261_0558 | | efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family | low | > 68 |
| Erwinia tracheiphila SCR3 | 0.31 | LU632_RS00800 | kdpD | two-component system sensor histidine kinase KdpD | 0.19 | LU632_RS09495 | | efflux transporter outer membrane subunit | low | > 74 |
| Variovorax sp. OAS795 | 0.31 | ABID97_RS01010 | | DUF4118 domain-containing protein | 0.41 | ABID97_RS00330 | | efflux transporter outer membrane subunit | low | > 91 |
| Ralstonia sp. UNC404CL21Col | 0.30 | ABZR87_RS04525 | | sensor histidine kinase KdpD | 0.39 | ABZR87_RS05320 | | efflux transporter outer membrane subunit | low | > 80 |
| Acidovorax sp. GW101-3H11 | 0.30 | Ac3H11_2408 | | Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) | 0.38 | Ac3H11_4447 | | RND efflux system, outer membrane lipoprotein CmeC | low | > 79 |
| Variovorax sp. SCN45 | 0.30 | GFF3520 | | Osmosensitive K+ channel histidine kinase KdpD | 0.40 | GFF3820 | | Efflux transport system, outer membrane factor (OMF) lipoprotein | low | > 127 |
Not shown: 9 genomes with orthologs for Rru_A1158 only; 18 genomes with orthologs for Rru_A2052 only