Homologs of PP_4968 from Pseudomonas putida KT2440

DNA ligase B
SEED: DNA ligase (EC 6.5.1.2)
KEGG: DNA ligase (NAD+)

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_4968 DNA ligase B insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS09855 ligB NAD-dependent DNA ligase LigB insig. 88 100
o Pseudomonas sp. SVBP6 COO64_RS17540 ligB NAD-dependent DNA ligase LigB insig. 61 95
o Pseudomonas syringae pv. syringae B728a Psyr_4796 DNA ligase (NAD+) insig. 55 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4796 DNA ligase (NAD+) insig. 55 98
o Pseudomonas fluorescens FW300-N2E3 AO353_07970 aromatic ring-opening dioxygenase LigA insig. 54 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4650 DNA ligase (EC 6.5.1.2) insig. 54 98
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1060 DNA ligase (EC 6.5.1.2) insig. 54 98
o Pseudomonas fluorescens FW300-N2C3 AO356_13660 aromatic ring-opening dioxygenase LigA insig. 55 98
o Pseudomonas sp. RS175 PFR28_04192 DNA ligase B insig. 53 98
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2394 DNA ligase (EC 6.5.1.2) insig. 54 98
o Pseudomonas sp. DMC3 GFF161 DNA ligase B cofit 54 95
o Pseudomonas stutzeri RCH2 Psest_0318 NAD-dependent DNA ligase (contains BRCT domain type II) sig. 54 98
o Pseudomonas simiae WCS417 PS417_26460 NAD-dependent DNA ligase LigB insig. 54 94
o Pseudomonas fluorescens SBW25 PFLU_RS28115 NAD-dependent DNA ligase LigB insig. 53 93
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28115 NAD-dependent DNA ligase LigB insig. 53 93
o Pseudomonas lactucae CFBP13502 GEMAOFIL_05424 DNA ligase B cofit 52 98
o Pseudomonas orientalis W4I3 QF045_RS00855 NAD-dependent DNA ligase LigB cofit 52 98
o Pseudomonas segetis P6 ACVTMO_RS03225 ligB NAD-dependent DNA ligase LigB insig. 51 98
o Rhodanobacter sp. FW510-T8 OKGIIK_12905 ligB NAD-dependent DNA ligase LigB insig. 52 95
o Pseudomonas sp. S08-1 OH686_10800 DNA ligase (NAD(+)) cofit 51 98
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS03765 NAD-dependent DNA ligase LigB insig. 51 98
o Rhodanobacter denitrificans MT42 LRK55_RS10680 NAD-dependent DNA ligase LigB insig. 50 98
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10975 NAD-dependent DNA ligase LigB insig. 50 98
o Enterobacter asburiae PDN3 EX28DRAFT_3896 NAD-dependent DNA ligase (contains BRCT domain type II) insig. 43 95
o Serratia liquefaciens MT49 IAI46_24880 NAD-dependent DNA ligase LigB insig. 43 99
o Klebsiella pneumoniae MRSN742743 KFA93_RS09050 ligB;go_function=DNA NAD-dependent DNA ligase LigB insig. 45 95
o Klebsiella pneumoniae MKP103 KDGMDA_08110 NAD-dependent DNA ligase LigB insig. 44 95
o Enterobacter sp. TBS_079 MPMX20_00089 DNA ligase B insig. 42 95
o Erwinia amylovora T8 OLJFJH_05575 NAD-dependent DNA ligase LigB insig. 41 98
o Dickeya dadantii 3937 DDA3937_RS00195 NAD-dependent DNA ligase LigB insig. 41 98
o Dickeya dianthicola ME23 DZA65_RS22135 NAD-dependent DNA ligase LigB insig. 41 98
o Escherichia coli Nissle 1917 ECOLIN_RS20775 NAD-dependent DNA ligase LigB insig. 38 97
o Escherichia coli ECOR38 HEPCGN_14390 ligB NAD-dependent DNA ligase LigB insig. 38 97
o Dickeya dianthicola 67-19 HGI48_RS21165 NAD-dependent DNA ligase LigB insig. 41 98
o Klebsiella michiganensis M5al BWI76_RS27410 DNA ligase B insig. 42 95
o Escherichia fergusonii Becca EFB2_00141 DNA ligase B insig. 38 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF361 DNA ligase (EC 6.5.1.2), LigB insig. 40 95
o Escherichia coli BL21 ECD_03504 DNA ligase, NAD(+)-dependent insig. 38 95
o Escherichia coli BW25113 b3647 yicF putative enzyme (VIMSS) insig. 38 95
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00054 DNA ligase B insig. 38 95
o Escherichia coli ECRC62 BNILDI_04065 ligB NAD-dependent DNA ligase LigB insig. 38 95
o Escherichia coli ECOR27 NOLOHH_07450 ligB NAD-dependent DNA ligase LigB insig. 38 95
o Pectobacterium carotovorum WPP14 HER17_RS21370 NAD-dependent DNA ligase LigB insig. 39 98
o Escherichia coli ECRC100 OKFHMN_15570 ligB NAD-dependent DNA ligase LigB cofit 38 95
o Escherichia coli ECRC101 MCAODC_06080 ligB NAD-dependent DNA ligase LigB insig. 38 95
o Escherichia coli ECRC102 NIAGMN_13330 ligB NAD-dependent DNA ligase LigB cofit 38 95
o Escherichia coli ECRC98 JDDGAC_19195 ligB NAD-dependent DNA ligase LigB insig. 38 95
o Escherichia coli ECRC99 KEDOAH_12575 ligB NAD-dependent DNA ligase LigB no data 38 95
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_08370 ligB NAD-dependent DNA ligase LigB cofit 41 93
o Erwinia tracheiphila SCR3 LU632_RS22215 ligB NAD-dependent DNA ligase LigB insig. 41 93
o Pantoea sp. MT58 IAI47_00525 NAD-dependent DNA ligase LigB insig. 41 95
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS18820 NAD-dependent DNA ligase LigB insig. 41 97
o Rahnella sp. WP5 EX31_RS15795 NAD-dependent DNA ligase LigB insig. 37 98
  Fusobacterium nucleatum SB010 HUW76_01225 NAD-dependent DNA ligase LigA no data 23 92
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_04510 DNA ligase (NAD(+)) LigA no data 26 92
  Alteromonas macleodii MIT1002 MIT1002_01924 DNA ligase no data 26 91
  Bacteroides ovatus ATCC 8483 BACOVA_02616 DNA ligase (NAD+) no data 24 93
  Klebsiella michiganensis M5al BWI76_RS20625 DNA ligase (NAD(+)) LigA no data 26 93
  Klebsiella pneumoniae MRSN742743 KFA93_RS05665 ligA;go_function=DNA NAD-dependent DNA ligase LigA no data 26 92
  Enterobacter sp. TBS_079 MPMX20_03305 DNA ligase no data 27 92
  Escherichia fergusonii Becca EFB2_01465 DNA ligase no data 26 93
  Klebsiella pneumoniae MKP103 KDGMDA_27470 NAD-dependent DNA ligase LigA no data 26 92
  Escherichia coli Nissle 1917 ECOLIN_RS13855 NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli ECOR38 HEPCGN_21395 ligA NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli ECOR27 NOLOHH_13895 ligA NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli ECRC62 BNILDI_12760 ligA NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli BW25113 b2411 ligA NAD-dependent DNA ligase LigA (NCBI) no data 25 93
  Enterobacter asburiae PDN3 EX28DRAFT_0217 DNA ligase, NAD-dependent no data 26 92
  Escherichia coli BL21 ECD_02311 DNA ligase, NAD(+)-dependent no data 25 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01312 DNA ligase no data 25 93
  Escherichia coli ECRC100 OKFHMN_22215 ligA NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli ECRC101 MCAODC_12745 ligA NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli ECRC102 NIAGMN_19985 ligA NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli ECRC98 JDDGAC_26165 ligA NAD-dependent DNA ligase LigA no data 25 93
  Escherichia coli ECRC99 KEDOAH_06005 ligA NAD-dependent DNA ligase LigA no data 25 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2041 DNA ligase (EC 6.5.1.2) no data 26 92
  Dickeya dadantii 3937 DDA3937_RS17095 NAD-dependent DNA ligase LigA no data 26 94
  Pectobacterium carotovorum WPP14 HER17_RS04045 NAD-dependent DNA ligase LigA no data 27 92
  Dickeya dianthicola 67-19 HGI48_RS17145 NAD-dependent DNA ligase LigA no data 26 94
  Bacteroides thetaiotaomicron VPI-5482 BT0894 DNA ligase (NCBI ptt file) no data 23 93
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS01725 NAD-dependent DNA ligase LigA no data 24 94
  Bacteroides stercoris CC31F HMPREF1181_RS14170 NAD-dependent DNA ligase LigA no data 24 93
  Pseudomonas sp. BP01 JOY50_RS00235 ligA NAD-dependent DNA ligase LigA no data 26 93
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11720 NAD-dependent DNA ligase LigA no data 23 93
  Pantoea sp. MT58 IAI47_05455 NAD-dependent DNA ligase LigA no data 26 91
  Phocaeicola dorei CL03T12C01 ABI39_RS17240 NAD-dependent DNA ligase LigA no data 24 92
  Erwinia amylovora T8 OLJFJH_10880 NAD-dependent DNA ligase LigA no data 27 82
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS03985 NAD-dependent DNA ligase LigA no data 24 92
  Pseudomonas aeruginosa PA14 IKLFDK_07290 DNA ligase no data 26 93
  Dickeya dianthicola ME23 DZA65_RS18230 NAD-dependent DNA ligase LigA no data 25 93
  Pseudomonas putida KT2440 PP_4274 DNA ligase no data 27 93
  Pseudomonas aeruginosa MRSN321 DY961_RS19265 ligA;go_function=DNA NAD-dependent DNA ligase LigA no data 26 93
  Pseudomonas aeruginosa PUPa3 DQ20_RS53400 ligA;go_function=DNA NAD-dependent DNA ligase LigA no data 26 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02055 DNA ligase (NAD(+)) LigA no data 22 93
  Pseudomonas sp. SVBP6 COO64_RS18560 ligA NAD-dependent DNA ligase LigA no data 27 93
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4080 DNA ligase (EC 6.5.1.2) no data 26 93
  Synechococcus elongatus PCC 7942 Synpcc7942_0277 ligA NAD-dependent DNA ligase LigA no data 26 92
  Vibrio cholerae E7946 ATCC 55056 CSW01_04960 DNA ligase (NAD(+)) LigA no data 25 92
  Xanthobacter sp. DMC5 GFF3828 DNA ligase no data 25 84