Homologs of PP_2256 from Pseudomonas putida KT2440

Transcriptional regulator, Cro/CI family
SEED: Transcriptional regulator, Cro/CI family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_2256 Transcriptional regulator, Cro/CI family insig. 100 100
o Pseudomonas sp. SVBP6 COO64_RS09665 helix-turn-helix domain-containing protein insig. 73 100
o Pseudomonas fluorescens FW300-N2E3 AO353_00700 Cro/Cl family transcriptional regulator strong 75 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3859 Transcriptional regulator, Cro/CI family insig. 74 100
o Pseudomonas sp. RS175 PFR28_01071 hypothetical protein strong 71 100
o Pseudomonas fluorescens FW300-N2C3 AO356_02525 Cro/Cl family transcriptional regulator insig. 73 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2330 Transcriptional regulator, Cro/CI family insig. 73 100
o Pseudomonas simiae WCS417 PS417_24905 DNA-binding protein sig. 30 95
o Pseudomonas segetis P6 ACVTMO_RS09680 helix-turn-helix domain-containing protein insig. 30 94
  Rhodopseudomonas palustris CGA009 TX73_011590 helix-turn-helix transcriptional regulator insig. 39 64
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS05315 helix-turn-helix transcriptional regulator no data 43 49
  Rhodopseudomonas palustris CGA009 TX73_021395 helix-turn-helix transcriptional regulator sig. 38 81
  Pseudomonas fluorescens SBW25 PFLU_RS15610 helix-turn-helix transcriptional regulator strong 33 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS15610 helix-turn-helix transcriptional regulator strong 33 61
  Pseudomonas fluorescens FW300-N2E3 AO353_24090 DNA-binding protein insig. 33 61
  Shewanella oneidensis MR-1 SO1265 transcriptional regulator, putative (NCBI ptt file) strong 35 68
  Escherichia coli ECOR27 NOLOHH_00405 hipB XRE family transcriptional regulator no data 44 46
  Shewanella sp. ANA-3 Shewana3_3100 XRE family transcriptional regulator (RefSeq) strong 35 68
  Ralstonia solanacearum PSI07 RPSI07_RS18415 XRE family transcriptional regulator insig. 40 61
  Xanthobacter sp. DMC5 GFF3339 HTH-type transcriptional regulator PuuR insig. 38 62
  Rhodospirillum rubrum S1H Rru_A3344 Transcriptional Regulator, XRE family (NCBI) sig. 42 58
  Cupriavidus basilensis FW507-4G11 RR42_RS18735 DNA-binding protein no data 28 94
  Ralstonia solanacearum UW163 UW163_RS11585 XRE family transcriptional regulator insig. 28 77
  Serratia liquefaciens MT49 IAI46_12755 helix-turn-helix transcriptional regulator no data 35 61
  Klebsiella pneumoniae MKP103 KDGMDA_01240 XRE family transcriptional regulator no data 46 48
  Pseudomonas fluorescens FW300-N2C3 AO356_06745 DNA-binding protein sig. 36 62
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3201 Transcriptional regulator, MerR family strong 36 62
  Dickeya dianthicola ME23 DZA65_RS20005 helix-turn-helix transcriptional regulator insig. 36 57
  Dickeya dadantii 3937 DDA3937_RS18900 helix-turn-helix transcriptional regulator no data 34 57
  Pseudomonas stutzeri RCH2 Psest_3791 Predicted transcriptional regulators insig. 35 69
  Paraburkholderia sabiae LMG 24235 QEN71_RS33920 XRE family transcriptional regulator strong 32 66
  Shewanella loihica PV-4 Shew_0970 XRE family transcriptional regulator (RefSeq) strong 34 59
  Escherichia coli ECOR38 HEPCGN_02335 transcriptional regulator insig. 30 70
  Azospirillum sp. SherDot2 MPMX19_05211 hypothetical protein insig. 38 56
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2584 Predicted transcriptional regulators insig. 37 65
  Dickeya dadantii 3937 DDA3937_RS03965 helix-turn-helix transcriptional regulator insig. 35 64
  Pseudomonas segetis P6 ACVTMO_RS00025 cupin domain-containing protein strong 34 59
  Dickeya dianthicola ME23 DZA65_RS12045 helix-turn-helix transcriptional regulator no data 29 99
  Dickeya dianthicola ME23 DZA65_RS12080 helix-turn-helix transcriptional regulator no data 29 99
  Pseudomonas fluorescens FW300-N2C3 AO356_00130 XRE family transcriptional regulator strong 24 94
  Pseudomonas sp. SVBP6 COO64_RS21060 helix-turn-helix domain-containing protein insig. 41 59
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS14960 XRE family transcriptional regulator insig. 39 59
  Ralstonia solanacearum UW163 UW163_RS12430 XRE family transcriptional regulator no data 39 59
  Pseudomonas sp. SVBP6 COO64_RS01380 cupin domain-containing protein insig. 35 60
  Paraburkholderia sabiae LMG 24235 QEN71_RS34635 helix-turn-helix transcriptional regulator insig. 35 95
  Pseudomonas sp. S08-1 OH686_13700 Putrescine utilization regulator strong 34 59
  Vibrio cholerae E7946 ATCC 55056 CSW01_00945 XRE family transcriptional regulator cofit 30 88
  Pseudomonas fluorescens SBW25 PFLU_RS29365 cupin domain-containing protein cofit 35 60
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29365 cupin domain-containing protein strong 35 60
  Pseudomonas lactucae CFBP13502 GEMAOFIL_00005 HTH-type transcriptional regulator PuuR cofit 35 60
  Pseudomonas orientalis W4I3 QF045_RS02040 cupin domain-containing protein cofit 35 60
  Pseudomonas simiae WCS417 PS417_27690 XRE family transcriptional regulator strong 35 60
  Pseudomonas fluorescens FW300-N2E3 AO353_09140 XRE family transcriptional regulator strong 35 60
  Pseudomonas fluorescens FW300-N2C3 AO356_12635 XRE family transcriptional regulator strong 35 60
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4394 Putrescine utilization regulator strong 35 60
  Azospirillum brasilense Sp245 AZOBR_RS02410 DNA-binding protein strong 32 69
  Ralstonia solanacearum GMI1000 RS_RS05775 XRE family transcriptional regulator insig. 39 59
  Bosea sp. OAE506 ABIE41_RS05345 cupin domain-containing protein insig. 36 66
  Pseudomonas sp. DMC3 GFF387 HTH-type transcriptional regulator PuuR cofit 35 60
  Pseudomonas syringae pv. syringae B728a Psyr_0238 Helix-turn-helix motif protein insig. 35 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0238 Helix-turn-helix motif protein insig. 35 60
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2147 Putrescine utilization regulator strong 35 60
  Pseudomonas sp. SVBP6 COO64_RS07815 helix-turn-helix domain-containing protein insig. 32 61
  Ralstonia solanacearum GMI1000 RS_RS23185 XRE family transcriptional regulator no data 38 63
  Pseudomonas simiae WCS417 PS417_09820 Cro/Cl family transcriptional regulator no data 36 59
  Agrobacterium fabrum C58 Atu4226 transcriptional regulator sig. 34 59
  Pseudomonas sp. RS175 PFR28_04396 HTH-type transcriptional regulator PuuR strong 35 60
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08380 DNA-binding protein cofit 34 71
  Erwinia tracheiphila SCR3 LU632_RS22230 helix-turn-helix domain-containing protein cofit 34 71
  Pseudomonas fluorescens FW300-N2E3 AO353_24180 transcriptional regulator sig. 36 56
  Pantoea sp. MT58 IAI47_07115 HTH-type transcriptional regulator PuuR insig. 28 71
  Pseudomonas fluorescens FW300-N2E3 AO353_24790 Cro/Cl family transcriptional regulator sig. 36 70
  Rhodanobacter sp. FW510-T8 OKGIIK_00235 helix-turn-helix transcriptional regulator insig. 33 61
  Escherichia coli BL21 ECD_01276 repressor for the divergent puu operons, putrescine inducible strong 30 71
  Escherichia coli ECOR27 NOLOHH_20120 puuR HTH-type transcriptional regulator PuuR insig. 30 71
  Escherichia coli ECOR38 HEPCGN_25765 puuR HTH-type transcriptional regulator PuuR insig. 30 71
  Escherichia coli ECRC100 OKFHMN_02435 puuR HTH-type transcriptional regulator PuuR cofit 30 71
  Escherichia coli ECRC101 MCAODC_15835 puuR HTH-type transcriptional regulator PuuR insig. 30 71
  Escherichia coli ECRC102 NIAGMN_26605 puuR HTH-type transcriptional regulator PuuR insig. 30 71
  Escherichia coli ECRC62 BNILDI_18270 puuR HTH-type transcriptional regulator PuuR insig. 30 71
  Escherichia coli ECRC98 JDDGAC_04980 puuR HTH-type transcriptional regulator PuuR insig. 30 71
  Escherichia coli ECRC99 KEDOAH_26340 puuR HTH-type transcriptional regulator PuuR no data 30 71
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02383 HTH-type transcriptional regulator PuuR insig. 30 71
  Enterobacter asburiae PDN3 EX28DRAFT_1500 Predicted transcriptional regulators insig. 30 71
  Escherichia coli BW25113 b1299 puuR DNA-binding transcriptional repressor (NCBI) strong 30 71
  Klebsiella pneumoniae MKP103 KDGMDA_18340 HTH-type transcriptional regulator PuuR insig. 30 71
  Klebsiella pneumoniae MRSN742743 KFA93_RS00545 puuR;inference=COORDINATES HTH-type transcriptional regulator PuuR strong 30 71
  Variovorax sp. SCN45 GFF273 Transcriptional regulator, Xre family strong 28 69
  Shewanella amazonensis SB2B Sama_2646 XRE family transcriptional regulator (RefSeq) strong 27 71
  Serratia liquefaciens MT49 IAI46_17165 HTH-type transcriptional regulator PuuR strong 26 78
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04766 hypothetical protein insig. 54 36
  Pseudomonas aeruginosa MRSN321 DY961_RS10735 cupin domain-containing protein insig. 41 59
  Pseudomonas aeruginosa PA14 IKLFDK_28600 Cro/Cl family transcriptional regulator insig. 41 59
  Pseudomonas aeruginosa PUPa3 DQ20_RS51325 cupin domain-containing protein insig. 41 59
  Pseudomonas fluorescens GW456-L13 PfGW456L13_815 Putrescine utilization regulator strong 34 60
  Acinetobacter baumannii LAC-4 RR41_RS01095 XRE family transcriptional regulator insig. 32 61
  Pectobacterium carotovorum WPP14 HER17_RS03720 XRE family transcriptional regulator insig. 29 60
  Serratia liquefaciens MT49 IAI46_10550 HTH-type transcriptional regulator PuuR insig. 29 81
  Pseudomonas orientalis W4I3 QF045_RS20030 helix-turn-helix transcriptional regulator insig. 23 94
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17685 helix-turn-helix transcriptional regulator insig. 32 70