| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Pseudomonas putida KT2440 | PP_2210 | | LysR family transcriptional regulator | strong | 100 | 100 |
| o | Pseudomonas sp. BP01 | JOY50_RS12660 | | LysR substrate-binding domain-containing protein | insig. | 93 | 100 |
| o | Pseudomonas sp. SVBP6 | COO64_RS19295 | | LysR substrate-binding domain-containing protein | insig. | 85 | 99 |
| o | Pseudomonas sp. DMC3 | GFF1456 | | HTH-type transcriptional regulator CysL | cofit | 83 | 99 |
| o | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3960 | | Phosphonate uptake and metabolism regulator, LysR-family | no data | 83 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_20245 | | LysR family transcriptional regulator | insig. | 82 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_17140 | | LysR family transcriptional regulator | insig. | 78 | 100 |
| o | Pseudomonas lactucae CFBP13502 | GEMAOFIL_03727 | | HTH-type transcriptional regulator CysL | cofit | 79 | 99 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2572 | | Phosphonate uptake and metabolism regulator, LysR-family | insig. | 82 | 99 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS19070 | | LysR family transcriptional regulator | insig. | 80 | 99 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19070 | | LysR family transcriptional regulator | insig. | 80 | 99 |
| o | Pseudomonas aeruginosa PA14 | IKLFDK_06215 | | LysR family transcriptional regulator | no data | 76 | 99 |
| | Azospirillum sp. SherDot2 | MPMX19_05150 | | HTH-type transcriptional activator CmpR | insig. | 45 | 99 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF2161 | | Transcriptional regulators, LysR family | insig. | 41 | 98 |
| | Pseudomonas putida KT2440 | PP_2547 | | Transcriptional regulator, LysR family | insig. | 41 | 97 |
| | Pseudomonas simiae WCS417 | PS417_17135 | | LysR family transcriptional regulator | insig. | 40 | 97 |
| | Pseudomonas sp. BP01 | JOY50_RS10245 | | LysR substrate-binding domain-containing protein | insig. | 40 | 97 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_07510 | | LysR family transcriptional regulator | insig. | 41 | 97 |
| | Sinorhizobium meliloti 1021 | SM_b21535 | | LysR family transcriptional regulator | insig. | 36 | 100 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3961 | | transcriptional regulator, MerR family | insig. | 40 | 97 |
| | Pseudomonas sp. DMC3 | GFF1457 | | HTH-type transcriptional activator CmpR | insig. | 39 | 97 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_2573 | | transcriptional regulator, MerR family | insig. | 39 | 97 |
| | Variovorax sp. SCN45 | GFF1616 | | Phosphonate uptake and metabolism regulator, LysR-family | insig. | 36 | 100 |
| | Variovorax sp. SCN45 | GFF1617 | | Phosphonate uptake and metabolism regulator, LysR-family | insig. | 37 | 100 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS13130 | | LysR family transcriptional regulator | insig. | 38 | 99 |
| | Variovorax sp. SCN45 | GFF1625 | | Transcriptional regulator, LysR family | insig. | 35 | 97 |
| | Pseudomonas segetis P6 | MPMX49_01481 | | HTH-type transcriptional activator CmpR | insig. | 35 | 99 |
| | Paraburkholderia graminis OAS925 | ABIE53_002275 | | aminoethylphosphonate catabolism LysR family transcriptional regulator | insig. | 37 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS12735 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS02285 | | LysR substrate-binding domain-containing protein | insig. | 35 | 98 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS20445 | | LysR substrate-binding domain-containing protein | insig. | 34 | 97 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01130 | | transcriptional regulator, LysR family | no data | 36 | 87 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10625 | | LysR family transcriptional regulator | no data | 35 | 89 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_960 | | Transcriptional regulators, LysR family | insig. | 34 | 98 |
| | Pseudomonas sp. DMC3 | GFF257 | | HTH-type transcriptional activator CmpR | insig. | 34 | 98 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_05531 | | HTH-type transcriptional activator CmpR | cofit | 35 | 98 |
| | Agrobacterium fabrum C58 | Atu4411 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2292 | | Transcriptional regulators, LysR family | insig. | 34 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS20700 | | LysR family transcriptional regulator | insig. | 35 | 98 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS19870 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Ralstonia solanacearum UW163 | UW163_RS19305 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Pseudomonas simiae WCS417 | PS417_26950 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS28610 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_08415 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Pseudomonas putida KT2440 | PP_5138 | | putative transcriptional regulator LysR family | insig. | 33 | 98 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS28250 | | LysR family transcriptional regulator | insig. | 34 | 98 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS20480 | | LysR family transcriptional regulator | insig. | 33 | 98 |
| | Pseudomonas sp. BP01 | JOY50_RS02255 | | LysR substrate-binding domain-containing protein | insig. | 34 | 95 |
| | Pseudomonas segetis P6 | MPMX49_00592 | | HTH-type transcriptional activator CmpR | insig. | 33 | 99 |
| | Pseudomonas sp. RS175 | PFR28_01936 | | HTH-type transcriptional activator CmpR | insig. | 34 | 98 |
| | Azospirillum sp. SherDot2 | MPMX19_03927 | | HTH-type transcriptional activator CmpR | insig. | 33 | 85 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08845 | | LysR family transcriptional regulator | strong | 30 | 83 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3156 | | transcriptional regulator, LysR family | insig. | 31 | 85 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3156 | | transcriptional regulator, LysR family | sig. | 31 | 85 |
| o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3918 | | Transcriptional regulator | insig. | 30 | 89 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS04820 | | LysR family transcriptional regulator | insig. | 32 | 85 |
| | Pseudomonas putida KT2440 | PP_3660 | | Transcriptional regulator, LysR family | insig. | 35 | 86 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS16560 | | HTH-type transcriptional activator CmpR | sig. | 27 | 98 |
| | Dickeya dadantii 3937 | DDA3937_RS05335 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| | Azospirillum sp. SherDot2 | MPMX19_00813 | | HTH-type transcriptional regulator CysL | insig. | 35 | 86 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1988 | | transcriptional regulator, LysR family | insig. | 35 | 100 |
| | Agrobacterium fabrum C58 | Atu0672 | | transcriptional regulator, LysR family | insig. | 33 | 80 |
| | Pseudomonas sp. BP01 | JOY50_RS07920 | | LysR family transcriptional regulator | insig. | 35 | 86 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31340 | | transcriptional regulator | insig. | 30 | 84 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1310 | cmpR | ndhF3 operon transcriptional regulator | no data | 30 | 83 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1980 | rbcR | transcriptional regulator, LysR family | no data | 31 | 85 |
| | Serratia liquefaciens MT49 | IAI46_11915 | | LysR family transcriptional regulator | cofit | 32 | 99 |
| | Variovorax sp. SCN45 | GFF1740 | | Transcriptional regulator, LysR family | insig. | 32 | 85 |
| | Dechlorosoma suillum PS | Dsui_2410 | | transcriptional regulator | cofit | 33 | 82 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32870 | | LysR family transcriptional regulator | insig. | 32 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS11310 | | LysR family transcriptional regulator | insig. | 31 | 99 |
| | Rhizobium sp. OAE497 | ABIE40_RS14205 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| o | Phaeobacter inhibens DSM 17395 | PGA1_262p00980 | | transcriptional regulator, LysR family | strong | 31 | 86 |
| | Rhodopseudomonas palustris CGA009 | TX73_000670 | | LysR family transcriptional regulator | insig. | 28 | 87 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | insig. | 35 | 82 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS19670 | | nitrogen assimilation transcriptional regulator | sig. | 35 | 82 |
| | Pseudomonas simiae WCS417 | PS417_14015 | | LysR family transcriptional regulator | sig. | 32 | 100 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05209 | | transcriptional regulator, LysR family | strong | 31 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS10635 | | transcriptional regulator | insig. | 32 | 80 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_5005 | | LysR family transcriptional regulator STM2281 | insig. | 31 | 100 |
| | Pseudomonas sp. SVBP6 | COO64_RS20175 | | LysR family transcriptional regulator | insig. | 32 | 99 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF17 | | LysR family transcriptional regulator YfeR | insig. | 33 | 94 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3174 | | RuBisCO operon transcriptional regulator | insig. | 30 | 82 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS34015 | | LysR family transcriptional regulator | insig. | 31 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS07095 | | LysR family transcriptional regulator | insig. | 33 | 91 |
| | Azospirillum brasilense Sp245 | AZOBR_RS32560 | | LysR family transcriptional regulator | insig. | 37 | 84 |
| | Paraburkholderia graminis OAS925 | ABIE53_002341 | | DNA-binding transcriptional LysR family regulator | insig. | 32 | 84 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS12375 | | LysR family transcriptional regulator | sig. | 35 | 89 |
| | Acinetobacter baumannii LAC-4 | RR41_RS11480 | | LysR family transcriptional regulator | insig. | 32 | 84 |
| | Rhodospirillum rubrum S1H | Rru_A1466 | | Transcriptional Regulator, LysR family (NCBI) | insig. | 28 | 83 |
| | Variovorax sp. OAS795 | ABID97_RS12840 | | LysR family transcriptional regulator | no data | 32 | 82 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS20425 | | LysR family transcriptional regulator | insig. | 28 | 84 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS11950 | | LysR family transcriptional regulator | cofit | 31 | 83 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS29890 | | LysR family transcriptional regulator | insig. | 27 | 84 |
| | Variovorax sp. SCN45 | GFF3832 | | Transcriptional regulator KPN_02830, LysR family | no data | 31 | 83 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04511 | | DNA-binding transcriptional regulator, LysR family | insig. | 32 | 84 |
| | Paraburkholderia graminis OAS925 | ABIE53_005077 | | DNA-binding transcriptional LysR family regulator | sig. | 28 | 84 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32390 | | LysR family transcriptional regulator | insig. | 32 | 84 |
| | Rhizobium sp. OAE497 | ABIE40_RS15535 | | LysR family transcriptional regulator | insig. | 29 | 94 |