Homologs of PP_0876 from Pseudomonas putida KT2440

Transcriptional regulator, AraC family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas putida KT2440 PP_0876 Transcriptional regulator, AraC family insig. 100 100
o Pseudomonas sp. BP01 JOY50_RS10935 nuclear transport factor 2 family protein insig. 94 97
o Pseudomonas sp. SVBP6 COO64_RS04080 nuclear transport factor 2 family protein insig. 78 98
o Pseudomonas sp. DMC3 GFF2858 hypothetical protein cofit 74 96
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4892 Transcriptional regulator, AraC family insig. 73 96
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3070 Transcriptional regulator, AraC family insig. 71 91
o Pseudomonas fluorescens SBW25 PFLU_RS15375 helix-turn-helix domain-containing protein insig. 68 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS15375 helix-turn-helix domain-containing protein insig. 68 96
o Pseudomonas sp. S08-1 OH686_03425 Transcriptional regulator, AraC family insig. 68 98
o Pseudomonas simiae WCS417 PS417_13415 AraC family transcriptional regulator insig. 68 96
o Pseudomonas orientalis W4I3 QF045_RS16505 helix-turn-helix domain-containing protein insig. 67 96
o Pseudomonas segetis P6 ACVTMO_RS10990 AraC family transcriptional regulator insig. 63 92
o Pseudomonas sp. RS175 PFR28_01487 hypothetical protein insig. 65 91
o Pseudomonas aeruginosa PA14 IKLFDK_17575 DUF4440 domain-containing protein insig. 60 96
o Pseudomonas fluorescens FW300-N2C3 AO356_29800 AraC family transcriptional regulator insig. 62 96
o Pseudomonas aeruginosa MRSN321 DY961_RS15810 nuclear transport factor 2 family protein insig. 62 90
o Pseudomonas aeruginosa PUPa3 DQ20_RS41270 nuclear transport factor 2 family protein insig. 62 90
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1767 Transcriptional regulator, AraC family insig. 61 93
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12090 hypothetical protein insig. 36 45
  Bacteroides ovatus ATCC 8483 BACOVA_01301 hypothetical protein insig. 32 44
  Bacteroides thetaiotaomicron VPI-5482 BT0138 transcriptional regulator (NCBI ptt file) insig. 32 47
  Rhodanobacter denitrificans MT42 LRK55_RS15135 helix-turn-helix domain-containing protein cofit 38 38
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS15415 helix-turn-helix domain-containing protein insig. 38 38
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2485 AraC-type DNA-binding domain-containing proteins insig. 35 42
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08180 helix-turn-helix domain-containing protein insig. 31 42
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08190 AraC family transcriptional regulator insig. 35 42
  Phocaeicola dorei CL03T12C01 ABI39_RS00665 helix-turn-helix domain-containing protein insig. 29 42
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS02035 hypothetical protein insig. 33 43
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS06365 AraC family transcriptional regulator insig. 38 37
  Bacteroides ovatus ATCC 8483 BACOVA_01311 transcriptional regulator, AraC family insig. 31 39
  Phocaeicola dorei CL03T12C01 ABI39_RS10650 AraC family transcriptional regulator strong 27 59
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14930 AraC family transcriptional regulator strong 27 59
  Bacteroides ovatus ATCC 8483 BACOVA_01324 hypothetical protein insig. 27 46
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08230 helix-turn-helix domain-containing protein insig. 26 67
  Phocaeicola dorei CL03T12C01 ABI39_RS00740 helix-turn-helix domain-containing protein insig. 30 37
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS10405 hypothetical protein insig. 28 44
  Variovorax sp. SCN45 GFF3410 Transcriptional regulator, AraC family insig. 33 39
  Phocaeicola dorei CL03T12C01 ABI39_RS00610 helix-turn-helix domain-containing protein insig. 26 42
  Vibrio cholerae E7946 ATCC 55056 CSW01_18765 AraC family transcriptional regulator insig. 35 38
  Phaeobacter inhibens DSM 17395 PGA1_78p00500 putative transcriptional regulator insig. 29 61
  Cellulophaga baltica 18 M666_RS01460 helix-turn-helix domain-containing protein insig. 22 73
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS02180 two-component regulator propeller domain-containing protein insig. 28 46
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS12385 two-component regulator propeller domain-containing protein insig. 27 49
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS14170 AraC family transcriptional regulator insig. 31 32
  Phocaeicola dorei CL03T12C01 ABI39_RS12185 helix-turn-helix domain-containing protein insig. 26 59
  Shewanella loihica PV-4 Shew_2295 AraC family transcriptional regulator (RefSeq) insig. 33 33
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS05430 hybrid sensor histidine kinase/response regulator transcription factor insig. 33 32
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3256 AraC-type DNA-binding domain-containing proteins insig. 32 40
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15610 helix-turn-helix domain-containing protein cofit 29 38
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS11370 two-component regulator propeller domain-containing protein insig. 28 42
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS16325 AraC family transcriptional regulator insig. 26 59
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00635 substrate-binding domain-containing protein strong 29 43
  Pectobacterium carotovorum WPP14 HER17_RS16640 helix-turn-helix domain-containing protein insig. 28 41
  Bacteroides thetaiotaomicron VPI-5482 BT0267 two-component system sensor histidine kinase/response regulator, hybrid ('one component system') (NCBI ptt file) sig. 32 32
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2623 transcriptional regulator, AraC family insig. 33 43
  Sinorhizobium meliloti 1021 SMc03170 transcriptional regulator insig. 34 34
  Pseudomonas orientalis W4I3 QF045_RS17170 AraC family transcriptional regulator insig. 33 31
  Ralstonia sp. UNC404CL21Col ABZR87_RS23255 helix-turn-helix transcriptional regulator insig. 30 50
  Lysobacter sp. OAE881 ABIE51_RS03340 AraC family transcriptional regulator insig. 29 45
  Cupriavidus basilensis FW507-4G11 RR42_RS22525 AraC family transcriptional regulator insig. 33 32
  Variovorax sp. SCN45 GFF2336 Transcriptional regulator, AraC family insig. 32 33
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4851 Transcriptional regulator of various polyols utilization, AraC family sig. 32 31
  Lysobacter sp. OAE881 ABIE51_RS03345 AraC family transcriptional regulator insig. 29 41
  Cellulophaga baltica 18 M666_RS09325 AraC family transcriptional regulator insig. 27 36
  Bacteroides ovatus ATCC 8483 BACOVA_01673 response regulator receiver domain protein insig. 26 43
  Rhizobium sp. OAE497 ABIE40_RS11210 GlxA family transcriptional regulator insig. 32 42
  Bacteroides ovatus ATCC 8483 BACOVA_01271 transcriptional regulator, AraC family insig. 25 39
  Pseudomonas sp. RS175 PFR28_01716 HTH-type transcriptional activator RhaS strong 32 31
  Phocaeicola dorei CL03T12C01 ABI39_RS05080 helix-turn-helix transcriptional regulator strong 32 35
  Pseudomonas fluorescens FW300-N2E3 AO353_23885 AraC family transcriptional regulator strong 32 31
  Pseudomonas fluorescens SBW25 PFLU_RS13410 AraC family transcriptional regulator strong 31 31
  Pseudomonas fluorescens SBW25-INTG PFLU_RS13410 AraC family transcriptional regulator strong 31 31
  Agrobacterium fabrum C58 Atu0248 transcriptional regulator, AraC family insig. 35 32
  Pseudomonas lactucae CFBP13502 GEMAOFIL_02793 HTH-type transcriptional activator RhaS cofit 31 31
  Pseudomonas simiae WCS417 PS417_12725 AraC family transcriptional regulator strong 31 31
  Cellulophaga baltica 18 M666_RS09975 helix-turn-helix domain-containing protein insig. 28 38
  Caulobacter crescentus NA1000 CCNA_01744 AraC-family transcriptional regulator insig. 27 47
  Caulobacter crescentus NA1000 Δfur CCNA_01744 AraC-family transcriptional regulator cofit 27 47
  Klebsiella pneumoniae MKP103 KDGMDA_10695 transcriptional regulator MelR insig. 31 32
  Bacteroides stercoris CC31F HMPREF1181_RS05670 substrate-binding domain-containing protein strong 31 33
  Erwinia amylovora T8 OLJFJH_14040 AraC family transcriptional regulator insig. 30 34
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2811 ABC-type sugar transport system, periplasmic component strong 28 33
  Bacteroides ovatus ATCC 8483 BACOVA_02182 response regulator receiver domain protein cofit 31 34
  Bacteroides ovatus ATCC 8483 BACOVA_05495 ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein strong 31 33
  Pseudomonas syringae pv. syringae B728a Psyr_2441 transcriptional regulator, AraC family insig. 31 31
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2441 transcriptional regulator, AraC family insig. 31 31
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_811 Transcriptional regulator of various polyols utilization, AraC family insig. 31 31
  Bacteroides ovatus ATCC 8483 BACOVA_05547 transcriptional regulator, AraC family strong 29 39
  Bacteroides ovatus ATCC 8483 BACOVA_04394 response regulator receiver domain protein strong 29 33
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3044 Transcriptional regulator of various polyols utilization, AraC family strong 28 34
  Caulobacter crescentus NA1000 CCNA_00935 AraC-family transcriptional regulator insig. 27 66
  Caulobacter crescentus NA1000 Δfur CCNA_00935 AraC-family transcriptional regulator cofit 27 66
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS07305 hybrid sensor histidine kinase/response regulator transcription factor insig. 26 43
  Rhodopseudomonas palustris CGA009 TX73_006805 AraC family transcriptional regulator insig. 26 32
  Agrobacterium fabrum C58 Atu1767 transcriptional regulator, AraC family strong 32 42
  Cellulophaga baltica 18 M666_RS18365 helix-turn-helix transcriptional regulator insig. 32 34
  Caulobacter crescentus NA1000 CCNA_02482 AraC-family transcriptional regulator cofit 31 32
  Caulobacter crescentus NA1000 Δfur CCNA_02482 AraC-family transcriptional regulator cofit 31 32
  Pseudomonas fluorescens FW300-N2C3 AO356_27665 AraC family transcriptional regulator strong 31 31
  Phocaeicola dorei CL03T12C01 ABI39_RS08240 substrate-binding domain-containing protein strong 29 42