Homologs of PFLU_RS06940 from Pseudomonas fluorescens SBW25-INTG

sigma-70 family RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

Or try PaperBLAST, fast.genomics, the ENIGMA genome browser, or the comparative fitness browser

Orth Species Gene Name Description Fitness %Id Cov
o Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 100 100
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 100 100
o Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 94 100
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 39 87
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 39 87
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 38 87
o Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 37 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 38 97
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 37 97
  Pseudomonas simiae WCS417 PS417_17630 RNA polymerase sigma factor insig. 37 87
  Pseudomonas fluorescens SBW25 PFLU_RS19420 sigma-70 family RNA polymerase sigma factor insig. 37 87
  Pseudomonas fluorescens SBW25-INTG PFLU_RS19420 sigma-70 family RNA polymerase sigma factor strong 37 87
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 37 97
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 36 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 38 87
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 39 85
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 37 85
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 36 95
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 38 82
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 38 85
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 34 94
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 37 82
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 36 85
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3565 heme uptake regulator insig. 36 79
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09360 RNA polymerase sigma factor insig. 40 84
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 35 83
  Variovorax sp. SCN45 GFF4261 RNA polymerase ECF-type sigma factor insig. 35 84
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04645 sigma-70 family RNA polymerase sigma factor cofit 33 89
  Paraburkholderia graminis OAS925 ABIE53_002674 RNA polymerase sigma factor (sigma-70 family) insig. 34 87
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 36 85
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 37 85
  Pseudomonas simiae WCS417 PS417_16255 RNA polymerase sigma factor sig. 34 83
  Pseudomonas fluorescens SBW25 PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 33 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS18285 sigma-70 family RNA polymerase sigma factor insig. 33 83
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0532 RNA polymerase sigma factor, sigma-70 family insig. 38 84
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 32 86
  Pseudomonas fluorescens FW300-N2C3 AO356_07625 RNA polymerase subunit sigma insig. 32 86
  Cupriavidus basilensis FW507-4G11 RR42_RS28810 RNA polymerase sigma factor no data 34 79
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 34 87
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 33 91
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3412 FIG006045: Sigma factor, ECF subfamily insig. 32 86
  Pseudomonas fluorescens SBW25 PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 32 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS30180 sigma-70 family RNA polymerase sigma factor insig. 32 80
  Pseudomonas simiae WCS417 PS417_28525 RNA polymerase sigma factor insig. 32 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_118 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 88
  Pseudomonas fluorescens FW300-N2C3 AO356_21215 RNA polymerase subunit sigma-24 insig. 33 91
  Dechlorosoma suillum PS Dsui_2977 RNA polymerase sigma factor, sigma-70 family insig. 32 79
  Dechlorosoma suillum PS Dsui_2948 RNA polymerase sigma factor, sigma-70 family insig. 34 95
  Pseudomonas sp. RS175 PFR28_04775 putative RNA polymerase sigma factor FecI insig. 39 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 33 91
  Pseudomonas syringae pv. syringae B728a Psyr_1040 RNA polymerase sigma factor, ECF subfamily strong 32 79
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1040 RNA polymerase sigma factor, ECF subfamily insig. 32 79
  Pseudomonas fluorescens FW300-N2C3 AO356_10620 RNA polymerase subunit sigma insig. 39 79
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2440 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 32 88
  Variovorax sp. SCN45 GFF4658 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 32 79
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3991 RNA polymerase sigma-70 factor, ECF subfamily insig. 39 79
  Pseudomonas putida KT2440 PP_0162 RNA polymerase sigma-70 factor, ECF subfamily sig. 35 91
  Pseudomonas simiae WCS417 PS417_09655 RNA polymerase sigma factor insig. 33 80
  Pseudomonas putida KT2440 PP_0865 ECF subfamily RNA polymerase sigma-24 factor insig. 32 88
  Pseudomonas simiae WCS417 PS417_09740 RNA polymerase subunit sigma-24 insig. 31 92
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 33 96
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 33 96
  Pseudomonas putida KT2440 PP_0667 RNA polymerase sigma-70 factor, ECF subfamily insig. 32 92
  Pseudomonas fluorescens FW300-N2C3 AO356_14080 RNA polymerase subunit sigma insig. 31 94
  Pseudomonas sp. RS175 PFR28_00037 putative RNA polymerase sigma factor FecI insig. 33 80
  Pseudomonas stutzeri RCH2 Psest_4339 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog strong 32 79
  Dickeya dadantii 3937 DDA3937_RS03525 sigma-70 family RNA polymerase sigma factor insig. 30 79
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS09540 sigma-70 family RNA polymerase sigma factor no data 33 85
o Phocaeicola dorei CL03T12C01 ABI39_RS02030 RNA polymerase sigma-70 factor insig. 32 92
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0584 RNA polymerase sigma factor, sigma-70 family insig. 35 78
  Pectobacterium carotovorum WPP14 HER17_RS17615 sigma-70 family RNA polymerase sigma factor insig. 29 79
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21465 RNA polymerase sigma factor insig. 33 84
  Ralstonia solanacearum UW163 UW163_RS17725 RNA polymerase sigma factor insig. 33 84
  Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 32 91
  Ralstonia solanacearum GMI1000 RS_RS19160 RNA polymerase sigma factor sig. 34 84
  Phocaeicola dorei CL03T12C01 ABI39_RS00660 sigma-70 family RNA polymerase sigma factor insig. 31 86
  Cupriavidus basilensis FW507-4G11 RR42_RS31145 RNA polymerase sigma factor insig. 28 85
o Burkholderia phytofirmans PsJN BPHYT_RS21530 RNA polymerase subunit sigma-24 insig. 34 85
  Pseudomonas simiae WCS417 PS417_00670 RNA polymerase sigma factor sig. 34 79
o Paraburkholderia sabiae LMG 24235 QEN71_RS14060 sigma-70 family RNA polymerase sigma factor insig. 34 83
  Rhodopseudomonas palustris CGA009 TX73_006850 RNA polymerase sigma factor insig. 33 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5307 FIG006045: Sigma factor, ECF subfamily strong 33 79
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_00202 RNA polymerase sigma factor, sigma-70 family insig. 31 85
  Serratia liquefaciens MT49 IAI46_11745 sigma-70 family RNA polymerase sigma factor no data 30 88
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4748 RNA polymerase sigma-70 factor, ECF subfamily insig. 31 85
  Pseudomonas sp. RS175 PFR28_00232 putative RNA polymerase sigma factor FecI insig. 31 79
  Herbaspirillum seropedicae SmR1 HSERO_RS22395 RNA polymerase sigma factor insig. 29 85
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1008 FIG006045: Sigma factor, ECF subfamily insig. 32 79
  Pectobacterium carotovorum WPP14 HER17_RS18100 sigma-70 family RNA polymerase sigma factor cofit 34 79
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 31 85
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 31 85
  Lysobacter sp. OAE881 ABIE51_RS06950 RNA polymerase sigma factor strong 30 91
  Pseudomonas sp. RS175 PFR28_04114 putative RNA polymerase sigma factor FecI insig. 29 94
  Pseudomonas putida KT2440 PP_0352 RNA polymerase sigma-70 factor, ECF subfamily sig. 31 91
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15455 RNA polymerase sigma factor insig. 36 80
  Pseudomonas fluorescens FW300-N2C3 AO356_16910 RNA polymerase subunit sigma insig. 33 79
  Herbaspirillum seropedicae SmR1 HSERO_RS15420 RNA polymerase subunit sigma-24 insig. 32 82
  Rahnella sp. WP5 EX31_RS16485 sigma-70 family RNA polymerase sigma factor insig. 31 79
  Pseudomonas putida KT2440 PP_3577 RNA polymerase, sigma 19 factor insig. 31 91
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05575 RNA polymerase sigma-70 factor insig. 30 81