Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Azospirillum sp. SherDot2 | MPMX19_05018 | | HTH-type transcriptional regulator RamB | insig. | 100 | 100 |
o | Azospirillum brasilense Sp245 | AZOBR_RS21095 | | Cro/Cl family transcriptional regulator | insig. | 89 | 98 |
o | Magnetospirillum magneticum AMB-1 | AMB_RS21455 | | XRE family transcriptional regulator | strong | 67 | 98 |
o | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS02450 | | short-chain fatty acyl-CoA regulator family protein | insig. | 55 | 99 |
| Azospirillum sp. SherDot2 | MPMX19_05829 | | HTH-type transcriptional regulator PrpR | insig. | 48 | 99 |
o | Variovorax sp. OAS795 | ABID97_RS19385 | | short-chain fatty acyl-CoA regulator family protein | strong | 51 | 98 |
| Azospirillum brasilense Sp245 | AZOBR_RS24280 | | Cro/Cl family transcriptional regulator | insig. | 49 | 98 |
o | Rhodospirillum rubrum S1H | Rru_A2316 | | Transcriptional Regulator, XRE family (NCBI) | insig. | 48 | 98 |
| Azospirillum brasilense Sp245 | AZOBR_RS02410 | | DNA-binding protein | strong | 48 | 99 |
o | Variovorax sp. SCN45 | GFF273 | | Transcriptional regulator, Xre family | strong | 48 | 97 |
o | Acidovorax sp. GW101-3H11 | Ac3H11_2320 | | Transcriptional regulator, XRE family | strong | 50 | 99 |
o | Xanthobacter sp. DMC5 | GFF3162 | | Propionyl-CoA carboxylase regulator | insig. | 47 | 99 |
o | Mycobacterium tuberculosis H37Rv | Rv0465c | | Probable transcriptional regulatory protein | insig. | 47 | 98 |
o | Dinoroseobacter shibae DFL-12 | Dshi_0716 | | transcriptional regulator, XRE family (RefSeq) | strong | 47 | 98 |
o | Sinorhizobium meliloti 1021 | SM_b20754 | | hypothetical protein | insig. | 47 | 97 |
o | Phaeobacter inhibens DSM 17395 | PGA1_c21630 | | putative transcriptional regulator | strong | 47 | 98 |
| Mycobacterium tuberculosis H37Rv | Rv1129c | | Probable transcriptional regulator protein | strong | 46 | 97 |
o | Agrobacterium fabrum C58 | Atu3587 | | transcriptional regulator | strong | 44 | 98 |
o | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3981 | | Predicted transcriptional regulator | insig. | 45 | 98 |
o | Sphingobium sp. HT1-2 | GFF127 | | Transcriptional regulator, Xre family | cofit | 43 | 98 |
| Rhodopseudomonas palustris CGA009 | TX73_022780 | | short-chain fatty acyl-CoA regulator family protein | no data | 41 | 98 |
o | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3690.1 | | Transcriptional regulator, XRE family protein | cofit | 47 | 93 |
| Dinoroseobacter shibae DFL-12 | Dshi_1221 | | transcriptional regulator, XRE family (RefSeq) | insig. | 37 | 98 |
| Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS02590 | | helix-turn-helix transcriptional regulator | strong | 40 | 98 |
| Dinoroseobacter shibae DFL-12 | Dshi_2488 | | transcriptional regulator, XRE family (RefSeq) | insig. | 38 | 93 |
| Caulobacter crescentus NA1000 | CCNA_01840 | | MerR-family transcriptional regulator | strong | 38 | 98 |
| Caulobacter crescentus NA1000 Δfur | CCNA_01840 | | MerR-family transcriptional regulator | cofit | 38 | 98 |
| Agrobacterium fabrum C58 | Atu0608 | | transcriptional regulator | strong | 37 | 96 |
| Sphingobium sp. HT1-2 | GFF2636 | | Transcriptional regulator, Xre family | cofit | 38 | 94 |
| Sinorhizobium meliloti 1021 | SMc00769 | | hypothetical protein | strong | 37 | 96 |
| Sphingobium sp. HT1-2 | GFF3680 | | hypothetical protein | cofit | 37 | 98 |
| Rhizobium sp. OAE497 | ABIE40_RS03260 | | short-chain fatty acyl-CoA regulator family protein | strong | 35 | 96 |
| Sphingomonas koreensis DSMZ 15582 | Ga0059261_3796 | | Predicted transcriptional regulator | sig. | 35 | 98 |
| Phaeobacter inhibens DSM 17395 | PGA1_c12680 | | transcriptional regulator | sig. | 28 | 95 |
| Dinoroseobacter shibae DFL-12 | Dshi_1405 | | transcriptional regulator, XRE family (RefSeq) | sig. | 25 | 95 |
| Rhodopseudomonas palustris CGA009 | TX73_012360 | | hypothetical protein | insig. | 35 | 27 |
| Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09265 | | XRE family transcriptional regulator | insig. | 22 | 94 |
| Caulobacter crescentus NA1000 | CCNA_02788 | | Xre-family transcriptional regulator | insig. | 43 | 12 |
| Caulobacter crescentus NA1000 Δfur | CCNA_02788 | | Xre-family transcriptional regulator | cofit | 43 | 12 |
| Pseudomonas sp. SVBP6 | COO64_RS21060 | | helix-turn-helix domain-containing protein | insig. | 38 | 15 |
| Fusobacterium nucleatum SB010 | HUW76_01135 | | cupin domain-containing protein | strong | 35 | 14 |
| Pseudomonas aeruginosa PA14 | IKLFDK_28600 | | Cro/Cl family transcriptional regulator | insig. | 41 | 13 |
| Pseudomonas sp. BP01 | JOY50_RS05765 | | helix-turn-helix domain-containing protein | no data | 31 | 18 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_24790 | | Cro/Cl family transcriptional regulator | sig. | 30 | 18 |
| Pseudomonas putida KT2440 | PP_2868 | | Transcriptional regulator, Cro/CI family | strong | 37 | 15 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3219 | | Transcriptional regulator, Cro/CI family | insig. | 38 | 13 |
| Rhizobium sp. OAE497 | ABIE40_RS19290 | | helix-turn-helix transcriptional regulator | insig. | 36 | 15 |
| Pseudomonas stutzeri RCH2 | Psest_3419 | | Predicted transcriptional regulators | strong | 39 | 20 |
| Magnetospirillum magneticum AMB-1 | AMB_RS02475 | | XRE family transcriptional regulator | insig. | 37 | 14 |
| Pseudomonas aeruginosa PA14 | IKLFDK_21015 | | transcriptional regulator | insig. | 34 | 13 |
| Phaeobacter inhibens DSM 17395 | PGA1_c28440 | | putative transcriptional regulator | insig. | 27 | 35 |
| Shewanella loihica PV-4 | Shew_2560 | | XRE family transcriptional regulator (RefSeq) | insig. | 37 | 14 |
| Escherichia coli BL21 | ECD_01392 | | putative DNA-binding transcriptional regulator | no data | 33 | 14 |
| Escherichia fergusonii Becca | EFB2_02548 | | HTH-type transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli ECOR27 | NOLOHH_19280 | sutR | DNA-binding transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli ECOR38 | HEPCGN_26215 | sutR | DNA-binding transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli ECRC100 | OKFHMN_01605 | sutR | DNA-binding transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli ECRC101 | MCAODC_16335 | sutR | DNA-binding transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli ECRC102 | NIAGMN_25740 | sutR | DNA-binding transcriptional regulator SutR | no data | 33 | 14 |
| Escherichia coli ECRC62 | BNILDI_17730 | sutR | DNA-binding transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli ECRC98 | JDDGAC_04095 | sutR | DNA-binding transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli ECRC99 | KEDOAH_26835 | sutR | DNA-binding transcriptional regulator SutR | no data | 33 | 14 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02281 | | HTH-type transcriptional regulator SutR | insig. | 33 | 14 |
| Escherichia coli Nissle 1917 | ECOLIN_RS08275 | | DNA-binding transcriptional regulator SutR | no data | 33 | 14 |
| Escherichia coli BW25113 | b1434 | ydcN | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 33 | 14 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS07155 | | helix-turn-helix transcriptional regulator | insig. | 40 | 13 |
| Pseudomonas syringae pv. syringae B728a | Psyr_1596 | | Helix-turn-helix motif protein | insig. | 57 | 7 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1596 | | Helix-turn-helix motif protein | no data | 57 | 7 |
| Shewanella sp. ANA-3 | Shewana3_4059 | | XRE family transcriptional regulator (RefSeq) | strong | 34 | 16 |
| Burkholderia phytofirmans PsJN | BPHYT_RS16515 | | 2-hydroxyacid dehydrogenase | insig. | 31 | 19 |
| Shewanella oneidensis MR-1 | SO4705 | | transcriptional regulator, putative (NCBI ptt file) | strong | 34 | 16 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS14570 | | DNA-binding protein | sig. | 35 | 16 |