Homologs of MIT1002_02086 from Alteromonas macleodii MIT1002

Nif-specific regulatory protein
SEED: Positive regulator of phenol hydroxylase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Alteromonas macleodii MIT1002 MIT1002_02086 Nif-specific regulatory protein insig. 100 100
o Marinobacter adhaerens HP15 HP15_4023 helix-turn-helix, Fis-type insig. 71 100
o Acinetobacter radioresistens SK82 MPMX26_00910 Phenol regulator MopR insig. 52 98
o Cupriavidus basilensis FW507-4G11 RR42_RS32695 Fis family transcriptional regulator insig. 50 97
o Pseudomonas sp. RS175 PFR28_01986 Phenol regulator MopR insig. 43 97
o Pseudomonas fluorescens FW300-N2C3 AO356_27970 Fis family transcriptional regulator insig. 42 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1372 sigma-54 dependent transcriptional regulator insig. 43 99
o Pseudomonas syringae pv. syringae B728a Psyr_2735 Helix-turn-helix, Fis-type insig. 42 97
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2735 Helix-turn-helix, Fis-type insig. 42 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS22395 sigma-54-dependent Fis family transcriptional regulator insig. 42 98
o Ralstonia solanacearum UW163 UW163_RS22940 sigma-54-dependent Fis family transcriptional regulator insig. 42 98
o Ralstonia solanacearum GMI1000 RS_RS18250 sigma-54-dependent Fis family transcriptional regulator insig. 42 98
o Herbaspirillum seropedicae SmR1 HSERO_RS22915 Fis family transcriptional regulator insig. 42 97
o Ralstonia solanacearum PSI07 RPSI07_RS00800 sigma-54-dependent Fis family transcriptional regulator insig. 41 98
o Pseudomonas fluorescens SBW25 PFLU_RS16115 sigma-54-dependent Fis family transcriptional regulator insig. 42 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS16115 sigma-54-dependent Fis family transcriptional regulator insig. 42 97
  Desulfovibrio vulgaris Hildenborough JW710 DVU3220 atoC sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 44 62
  Desulfovibrio vulgaris Hildenborough JW710 DVUA0143 nifA-2 nif-specific regulatory protein (TIGR) strong 44 63
  Desulfovibrio vulgaris Miyazaki F DvMF_2200 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 41 62
  Desulfovibrio vulgaris Hildenborough JW710 DVU2934 ntrX sigma-54 dependent transcriptional regulator/response regulator (TIGR) no data 41 63
  Escherichia coli BL21 ECD_02147 fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein cofit 42 62
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01490 Regulatory protein AtoC insig. 42 62
  Escherichia coli BW25113 b2220 atoC fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) insig. 42 62
  Azospirillum brasilense Sp245 AZOBR_RS29300 Fis family transcriptional regulator insig. 46 62
  Rhodopseudomonas palustris CGA009 TX73_024055 nif-specific transcriptional activator NifA strong 42 63
  Escherichia fergusonii Becca EFB2_01635 Regulatory protein AtoC insig. 42 62
  Escherichia coli Nissle 1917 ECOLIN_RS12965 acetoacetate metabolism transcriptional regulator AtoC no data 42 62
  Escherichia coli ECOR38 HEPCGN_22430 atoC acetoacetate metabolism transcriptional regulator AtoC cofit 42 62
  Rhodopseudomonas palustris CGA009 TX73_007055 sigma-54-dependent Fis family transcriptional regulator cofit 44 62
  Desulfovibrio vulgaris Miyazaki F DvMF_2528 transcriptional regulator, NifA subfamily, Fis Family (RefSeq) strong 49 47
  Desulfovibrio vulgaris Miyazaki F DvMF_0823 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 44 58
  Rhodospirillum rubrum S1H Rru_A1388 Transcriptional Regulator, NifA subfamily, Fis Family (NCBI) cofit 46 58
  Desulfovibrio vulgaris Miyazaki F DvMF_0608 transcriptional regulator, NifA subfamily, Fis Family (RefSeq) strong 44 57
  Rhodopseudomonas palustris CGA009 TX73_007390 sigma-54-dependent Fis family transcriptional regulator insig. 43 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU2894 flrA sigma-54 dependent transcriptional regulator (TIGR) strong 44 58
  Escherichia coli ECRC62 BNILDI_12310 hyfR DNA-binding transcriptional regulator HyfR insig. 48 48
  Escherichia coli ECRC101 OKFHMN_21850 hyfR DNA-binding transcriptional regulator HyfR insig. 48 48
  Escherichia coli ECRC101 MCAODC_12380 hyfR DNA-binding transcriptional regulator HyfR insig. 48 48
  Escherichia coli ECRC102 NIAGMN_19620 hyfR DNA-binding transcriptional regulator HyfR insig. 48 48
  Escherichia coli ECRC98 JDDGAC_25795 hyfR DNA-binding transcriptional regulator HyfR no data 48 48
  Escherichia coli ECRC99 KEDOAH_06370 hyfR DNA-binding transcriptional regulator HyfR no data 48 48
  Pseudomonas fluorescens FW300-N2E3 AO353_16225 Fis family transcriptional regulator insig. 41 61
  Dechlorosoma suillum PS Dsui_0940 Nif-specific regulatory protein strong 49 46
  Dickeya dadantii 3937 DDA3937_RS07400 formate hydrogenlyase transcriptional activator FlhA insig. 38 73
  Escherichia coli BL21 ECD_02383 hydrogenase-4 transcriptional activator cofit 48 48
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01235 DNA-binding transcriptional activator HyfR insig. 48 48
  Escherichia coli BW25113 b2491 hyfR putative 2-component regulator, interaction with sigma 54 (VIMSS) sig. 48 48
  Escherichia coli ECOR38 HEPCGN_21015 hyfR DNA-binding transcriptional activator HyfR insig. 48 48
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_2422 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains strong 44 58
  Desulfovibrio vulgaris Hildenborough JW710 DVU1949 nifA-1 nif-specific regulatory protein (TIGR) strong 44 56
  Desulfovibrio vulgaris Miyazaki F DvMF_1324 sigma54 specific transcriptional regulator, Fis family (RefSeq) strong 42 58
  Desulfovibrio vulgaris Miyazaki F DvMF_0670 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) insig. 41 61
  Dickeya dadantii 3937 DDA3937_RS18805 nif-specific transcriptional activator NifA insig. 45 57
  Klebsiella michiganensis M5al BWI76_RS18890 nif-specific transcriptional activator NifA sig. 45 57
  Kangiella aquimarina DSM 16071 B158DRAFT_0521 PEP-CTERM-box response regulator transcription factor strong 41 63
  Dickeya dianthicola ME23 DZA65_RS19920 nif-specific transcriptional activator NifA insig. 44 57
  Pseudomonas simiae WCS417 PS417_05525 Fis family transcriptional regulator strong 41 61
  Desulfovibrio vulgaris Hildenborough JW710 DVU0110 ntrC sigma-54 dependent transcriptional regulator/response regulator (TIGR) cofit 40 58
  Dickeya dianthicola 67-19 HGI48_RS18785 nif-specific transcriptional activator NifA insig. 44 57
  Rhodospirillum rubrum S1H Rru_A3104 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) insig. 39 64
  Herbaspirillum seropedicae SmR1 HSERO_RS14390 ATPase AAA strong 52 44
  Rhodospirillum rubrum S1H Rru_A1385 Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) cofit 40 62
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS01040 sigma-54-dependent Fis family transcriptional regulator insig. 40 64
  Dickeya dianthicola 67-19 HGI48_RS07265 formate hydrogenlyase transcriptional activator FlhA insig. 42 59
  Dickeya dianthicola ME23 DZA65_RS07775 formate hydrogenlyase transcriptional activator FlhA insig. 42 58
  Escherichia coli ECOR27 NOLOHH_13500 Fis family transcriptional regulator insig. 51 42
  Rahnella sp. WP5 EX31_RS15395 nif-specific transcriptional activator NifA insig. 41 67
  Pseudomonas fluorescens SBW25 PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 40 61
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05610 sigma-54-dependent Fis family transcriptional regulator strong 40 61
  Pseudomonas putida KT2440 PP_4373 Transcriptional regulator FleQ strong 40 58
  Escherichia coli ECRC62 BNILDI_06055 zraR sigma-54-dependent response regulator transcription factor ZraR insig. 43 58
  Escherichia coli BW25113 b4004 zraR fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) insig. 43 58
  Escherichia coli ECOR38 HEPCGN_11960 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 42 58
  Escherichia coli Nissle 1917 ECOLIN_RS23090 sigma-54-dependent response regulator transcription factor ZraR insig. 42 58
  Paraburkholderia sabiae LMG 24235 QEN71_RS42175 nif-specific transcriptional activator NifA insig. 43 58
  Escherichia fergusonii Becca EFB2_04606 Transcriptional regulatory protein ZraR insig. 42 58
  Shewanella sp. ANA-3 Shewana3_3227 Fis family transcriptional regulator (RefSeq) insig. 40 62
  Pseudomonas syringae pv. syringae B728a Psyr_3461 Helix-turn-helix, Fis-type strong 39 58
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3461 Helix-turn-helix, Fis-type cofit 39 58
  Escherichia coli ECOR27 NOLOHH_05465 zraR sigma-54-dependent response regulator transcription factor ZraR cofit 42 58
  Herbaspirillum seropedicae SmR1 HSERO_RS23170 ATPase AAA insig. 42 58
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04045 Transcriptional regulatory protein ZraR insig. 42 58
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1930 Transcriptional regulatory protein zraR insig. 42 59
  Desulfovibrio vulgaris Miyazaki F DvMF_1461 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) no data 49 44
  Escherichia coli BL21 ECD_03881 fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein insig. 42 58
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_02275 sigma-54-dependent Fis family transcriptional regulator insig. 41 58
  Azospirillum sp. SherDot2 MPMX19_03461 Regulatory protein AtoC insig. 41 58
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4357 Flagellar regulatory protein FleQ insig. 40 58
  Desulfovibrio vulgaris Miyazaki F DvMF_1993 two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) sig. 40 58
  Pseudomonas fluorescens FW300-N2C3 AO356_03855 AAA family ATPase strong 40 58
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2597 Flagellar regulatory protein FleQ strong 40 58
  Desulfovibrio vulgaris Miyazaki F DvMF_3010 sigma54 specific transcriptional regulator, Fis family (RefSeq) strong 37 72
  Pseudomonas sp. RS175 PFR28_00828 Anaerobic nitric oxide reductase transcription regulator NorR strong 40 58
  Azospirillum sp. SherDot2 MPMX19_03130 Anaerobic nitric oxide reductase transcription regulator NorR insig. 39 63
  Pseudomonas putida KT2440 PP_3503 Sigma-54 dependent transcriptional regulator sig. 41 58
  Herbaspirillum seropedicae SmR1 HSERO_RS12530 transcriptional regulator insig. 41 60
  Shewanella oneidensis MR-1 SO3660 sigma-54 dependent transcriptional regulator/sensory box protein (NCBI ptt file) insig. 40 62
  Magnetospirillum magneticum AMB-1 AMB_RS17530 nif-specific transcriptional activator NifA insig. 40 58
  Pseudomonas stutzeri RCH2 Psest_1071 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains strong 40 65
  Pseudomonas fluorescens FW300-N2E3 AO353_18660 AAA family ATPase strong 40 58