Homologs of HSERO_RS13475 from Herbaspirillum seropedicae SmR1

C4-dicarboxylate ABC transporter
SEED: TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 4

69 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS13475 C4-dicarboxylate ABC transporter sig. 100 100
o Rhodopseudomonas palustris CGA009 TX73_013135 TRAP transporter small permease insig. 62 69
  Magnetospirillum magneticum AMB-1 AMB_RS02190 C4-dicarboxylate ABC transporter insig. 45 64
o Sinorhizobium meliloti 1021 SMa0155 hypothetical protein insig. 35 85
  Dinoroseobacter shibae DFL-12 Dshi_1090 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 35 79
  Dinoroseobacter shibae DFL-12 Dshi_3002 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 34 65
  Castellaniella sp019104865 MT123 ABCV34_RS01195 TRAP transporter small permease insig. 32 77
  Marinobacter adhaerens HP15 HP15_3919 tripartite ATP-independent periplasmic transporter, DctQ component insig. 30 78
  Escherichia coli ECOR38 HEPCGN_01265 C4-dicarboxylate ABC transporter permease cofit 25 55
  Paraburkholderia sabiae LMG 24235 QEN71_RS36145 TRAP transporter small permease insig. 26 82
  Azospirillum brasilense Sp245 AZOBR_RS27155 hypothetical protein insig. 30 66
  Shewanella oneidensis MR-1 SO3135 C4-dicarboxylate transporter, putative (NCBI ptt file) insig. 25 82
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05541 TRAP transporter, DctM subunit insig. 41 39
  Agrobacterium fabrum C58 Atu3366 tripartite ATP-independent periplasmic transporter DctQ insig. 23 76
  Shewanella amazonensis SB2B Sama_2210 alpha-ketoglutarate TRAP transporter, small permease component (from data) strong 24 74
  Azospirillum brasilense Sp245 AZOBR_RS20020 C4-dicarboxylate ABC transporter substrate-binding protein insig. 25 77
  Bosea sp. OAE506 ABIE41_RS07005 TRAP transporter small permease subunit insig. 23 81
  Shewanella sp. ANA-3 Shewana3_1415 tripartite ATP-independent periplasmic transporter DctQ (RefSeq) strong 23 76
  Cupriavidus basilensis FW507-4G11 RR42_RS09085 C4-dicarboxylate ABC transporter permease insig. 29 66
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2061 TRAP dicarboxylate transporter, DctQ subunit, unknown substrate 6 insig. 27 76
  Castellaniella sp019104865 MT123 ABCV34_RS15065 TRAP transporter small permease insig. 24 68
  Escherichia coli ECOR38 HEPCGN_09410 C4-dicarboxylate ABC transporter permease cofit 29 55
  Cupriavidus basilensis FW507-4G11 RR42_RS10605 C4-dicarboxylate ABC transporter permease insig. 39 28
  Agrobacterium fabrum C58 Atu3254 dicarboxylate ABC transporter ATPase insig. 30 45
  Acidovorax sp. GW101-3H11 Ac3H11_3521 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 29 66
  Phaeobacter inhibens DSM 17395 PGA1_c20670 TRAP transporter for fumarate, succinate, L-malate, and 2-oxogulatarate, small permease component (from data) strong 27 53
  Vibrio cholerae E7946 ATCC 55056 CSW01_09645 C4-dicarboxylate ABC transporter permease insig. 23 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1303 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 25 60
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01744 TRAP transporter, DctM subunit insig. 36 26
  Bosea sp. OAE506 ABIE41_RS11585 TRAP transporter small permease insig. 27 81
  Azospirillum sp. SherDot2 MPMX19_05802 hypothetical protein cofit 24 67
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2988 TRAP-type C4-dicarboxylate transport system, small permease component insig. 28 72
  Rhodospirillum rubrum S1H Rru_A2238 Tripartite ATP-independent periplasmic transporter, DctQ component (NCBI) cofit 28 70
  Desulfovibrio vulgaris Miyazaki F DvMF_2136 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 35 42
  Dechlorosoma suillum PS Dsui_1263 TRAP-type mannitol/chloroaromatic compound transport system, small permease component cofit 29 70
  Bosea sp. OAE506 ABIE41_RS13020 TRAP transporter small permease subunit cofit 24 70
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3628 TRAP-type C4-dicarboxylate transport system, small permease component insig. 28 73
  Pseudomonas fluorescens FW300-N2C3 AO356_25635 C4-dicarboxylate ABC transporter permease insig. 25 60
  Castellaniella sp019104865 MT123 ABCV34_RS05055 TRAP transporter small permease insig. 26 66
  Marinobacter adhaerens HP15 HP15_3027 TRAP transporter, DctQ-like membrane protein insig. 28 71
  Azospirillum sp. SherDot2 MPMX19_03998 hypothetical protein insig. 23 83
  Cupriavidus basilensis FW507-4G11 RR42_RS15930 sugar transporter insig. 23 73
  Paraburkholderia graminis OAS925 ABIE53_005306 tripartite ATP-independent transporter DctM subunit insig. 36 50
  Burkholderia phytofirmans PsJN BPHYT_RS35765 ABC transporter permease insig. 34 51
  Bosea sp. OAE506 ABIE41_RS23670 TRAP transporter small permease insig. 25 59
  Castellaniella sp019104865 MT123 ABCV34_RS12230 TRAP transporter small permease insig. 34 44
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2095 TRAP-type C4-dicarboxylate transport system, small permease component no data 27 64
  Acidovorax sp. GW101-3H11 Ac3H11_1229 TRAP-type transport system, small permease component, predicted N-acetylneuraminate transporter insig. 26 64
  Dinoroseobacter shibae DFL-12 Dshi_1036 Tripartite ATP-independent periplasmic transporter DctQ component (RefSeq) insig. 26 77
  Acidovorax sp. GW101-3H11 Ac3H11_3956 TRAP-type C4-dicarboxylate transport system, small permease component insig. 26 59
  Pectobacterium carotovorum WPP14 HER17_RS19680 TRAP transporter small permease insig. 23 55
  Variovorax sp. OAS795 ABID97_RS00845 TRAP transporter small permease subunit insig. 27 86
  Variovorax sp. SCN45 GFF1397 TRAP-type C4-dicarboxylate transport system, large permease component insig. 37 24
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF388 TRAP-type C4-dicarboxylate transport system, small permease component insig. 30 79
  Sinorhizobium meliloti 1021 SM_b20443 permease insig. 31 60
  Sinorhizobium meliloti 1021 SMa0249 TRAP-type small permease component insig. 25 70
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF796 TRAP-type C4-dicarboxylate transport system, small permease component insig. 24 61
  Alteromonas macleodii MIT1002 MIT1002_02427 Neu5Ac permease insig. 23 65
  Rahnella sp. WP5 EX31_RS08015 TRAP transporter small permease insig. 22 56
  Rhizobium sp. OAE497 ABIE40_RS16620 TRAP transporter small permease subunit insig. 22 80
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF173 TRAP-type C4-dicarboxylate transport system, small permease component insig. 33 43
  Fusobacterium nucleatum SB010 HUW76_03970 TRAP transporter small permease strong 30 52
  Variovorax sp. SCN45 GFF3597 TRAP-type C4-dicarboxylate transport system, small permease component insig. 28 79
  Agrobacterium fabrum C58 Atu5270 permease component of C4 dicarboxylate transporter no data 22 73
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03762 TRAP transporter, DctM subunit insig. 34 43
  Paraburkholderia sabiae LMG 24235 QEN71_RS16020 TRAP transporter large permease subunit insig. 34 64
  Azospirillum brasilense Sp245 AZOBR_RS31405 C4-dicarboxylate ABC transporter permease insig. 20 71
  Azospirillum sp. SherDot2 MPMX19_04771 Sialic acid TRAP transporter permease protein SiaT insig. 32 48
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00127 2,3-diketo-L-gulonate TRAP transporter small permease protein YiaM sig. 24 77