Homologs of HSERO_RS11480 from Herbaspirillum seropedicae SmR1

D-ribose ABC transporter, substrate-binding component RbsB (from data)
Original annotation: LacI family transcriptional regulator
SEED: Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1)
KEGG: ribose transport system substrate-binding protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS11480 D-ribose ABC transporter, substrate-binding component RbsB (from data) strong 100 100
o Paraburkholderia graminis OAS925 ABIE53_002325 ribose transport system substrate-binding protein strong 74 100
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05225 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 74 100
o Pseudomonas sp. RS175 PFR28_02737 Ribose import binding protein RbsB strong 71 99
o Burkholderia phytofirmans PsJN BPHYT_RS11220 LacI family transcriptional regulator insig. 75 93
  Burkholderia phytofirmans PsJN BPHYT_RS20680 LacI family transcriptional regulator sig. 73 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS07335 sugar ABC transporter substrate-binding protein cofit 70 100
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3912 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) insig. 72 96
o Pseudomonas fluorescens FW300-N2C3 AO356_00970 LacI family transcriptional regulator strong 73 93
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_161 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) sig. 73 93
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_6035 D-ribose ABC transporter, substrate-binding component RbsB (from data) sig. 72 93
o Pseudomonas fluorescens FW300-N2E3 AO353_20815 LacI family transcriptional regulator sig. 73 91
o Variovorax sp. SCN45 GFF2140 Ribose ABC transporter, substrate-binding protein RbsB (TC 3.A.1.2.1) insig. 73 99
o Pseudomonas syringae pv. syringae B728a Psyr_2151 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 69 99
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2151 monosaccharide ABC transporter substrate-binding protein, CUT2 family no data 69 99
o Ralstonia solanacearum PSI07 RPSI07_RS19210 sugar ABC transporter substrate-binding protein strong 65 100
o Ralstonia solanacearum GMI1000 RS_RS05035 sugar ABC transporter substrate-binding protein insig. 64 100
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS14255 sugar ABC transporter substrate-binding protein insig. 64 100
o Ralstonia solanacearum UW163 UW163_RS11720 sugar ABC transporter substrate-binding protein insig. 64 100
o Ralstonia sp. UNC404CL21Col ABZR87_RS09970 sugar ABC transporter substrate-binding protein sig. 64 100
o Variovorax sp. OAS795 ABID97_RS24755 sugar ABC transporter substrate-binding protein sig. 75 91
o Pseudomonas putida KT2440 PP_2454 ribose ABC transporter, periplasmic ribose-binding subunit insig. 69 91
o Acidovorax sp. GW101-3H11 Ac3H11_1842 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) cofit 67 99
o Pseudomonas simiae WCS417 PS417_18405 D-ribose ABC transporter, substrate-binding component RbsB (from data) no data 68 93
o Pseudomonas fluorescens SBW25 PFLU_RS20380 sugar ABC transporter substrate-binding protein insig. 69 91
o Pseudomonas fluorescens SBW25-INTG PFLU_RS20380 sugar ABC transporter substrate-binding protein strong 69 91
  Burkholderia phytofirmans PsJN BPHYT_RS20560 sugar ABC transporter substrate-binding protein insig. 55 90
  Paraburkholderia graminis OAS925 ABIE53_004419 ribose transport system substrate-binding protein sig. 53 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03822 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 53 90
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS02685 substrate-binding domain-containing protein insig. 40 84
o Phocaeicola dorei CL03T12C01 ABI39_RS01965 substrate-binding domain-containing protein insig. 40 83
o Enterobacter asburiae PDN3 EX28DRAFT_4027 ABC-type sugar transport system, periplasmic component cofit 34 92
o Enterobacter sp. TBS_079 MPMX20_04616 Ribose import binding protein RbsB strong 34 92
o Escherichia coli Nissle 1917 ECOLIN_RS21565 ribose ABC transporter substrate-binding protein RbsB insig. 34 92
o Escherichia coli BL21 ECD_03637 D-ribose ABC transporter periplasmic binding protein; ribose chemotaxis receptor insig. 34 92
o Escherichia fergusonii Becca EFB2_04882 Ribose import binding protein RbsB insig. 34 92
o Escherichia coli ECOR27 NOLOHH_06870 rbsB ribose ABC transporter substrate-binding protein RbsB cofit 34 92
o Escherichia coli ECRC101 OKFHMN_14735 rbsB ribose ABC transporter substrate-binding protein RbsB insig. 34 92
o Escherichia coli ECRC101 MCAODC_05240 rbsB ribose ABC transporter substrate-binding protein RbsB insig. 34 92
o Escherichia coli ECRC102 NIAGMN_12490 rbsB ribose ABC transporter substrate-binding protein RbsB insig. 34 92
o Escherichia coli ECRC62 BNILDI_04655 rbsB ribose ABC transporter substrate-binding protein RbsB insig. 34 92
o Escherichia coli ECRC98 JDDGAC_18355 rbsB ribose ABC transporter substrate-binding protein RbsB no data 34 92
o Escherichia coli ECRC99 KEDOAH_13415 rbsB ribose ABC transporter substrate-binding protein RbsB no data 34 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_04302 Ribose import binding protein RbsB insig. 34 92
o Escherichia coli ECOR38 HEPCGN_13445 rbsB ribose ABC transporter substrate-binding protein RbsB cofit 34 92
o Escherichia coli BW25113 b3751 rbsB D-ribose transporter subunit (NCBI) strong 34 92
o Pectobacterium carotovorum WPP14 HER17_RS21535 ribose ABC transporter substrate-binding protein RbsB cofit 35 92
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1706 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) insig. 34 92
o Klebsiella michiganensis M5al BWI76_RS00285 D-ribose ABC transporter substrate-binding protein strong 33 92
o Serratia liquefaciens MT49 IAI46_25060 ribose ABC transporter substrate-binding protein RbsB insig. 34 92
o Dickeya dadantii 3937 DDA3937_RS00045 ribose ABC transporter substrate-binding protein RbsB insig. 34 97
o Pantoea sp. MT58 IAI47_00365 ribose ABC transporter substrate-binding protein RbsB insig. 32 95
o Dickeya dianthicola 67-19 HGI48_RS21320 ribose ABC transporter substrate-binding protein RbsB cofit 33 91
o Dickeya dianthicola ME23 DZA65_RS22300 ribose ABC transporter substrate-binding protein RbsB sig. 33 91
o Rahnella sp. WP5 EX31_RS06185 ribose ABC transporter substrate-binding protein RbsB insig. 33 90
  Rahnella sp. WP5 EX31_RS20775 substrate-binding domain-containing protein insig. 31 90
o Vibrio cholerae E7946 ATCC 55056 CSW01_14660 ribose ABC transporter substrate-binding protein RbsB insig. 31 91
  Enterobacter sp. TBS_079 MPMX20_00308 D-allose-binding periplasmic protein cofit 34 88
  Escherichia coli BL21 ECD_03960 D-allose ABC transporter periplasmic binding protein insig. 34 88
  Escherichia fergusonii Becca EFB2_04494 D-allose-binding periplasmic protein insig. 34 88
  Escherichia coli ECOR38 HEPCGN_11345 alsB D-allose transporter substrate-binding protein cofit 34 88
  Escherichia coli Nissle 1917 ECOLIN_RS23680 D-allose transporter substrate-binding protein insig. 34 88
  Escherichia coli BW25113 b4088 alsB D-allose transporter subunit (NCBI) insig. 34 88
  Escherichia coli ECOR27 NOLOHH_04975 alsB D-allose transporter substrate-binding protein insig. 34 88
  Rhizobium sp. OAE497 ABIE40_RS26270 ABC transporter substrate-binding protein insig. 33 87
  Klebsiella michiganensis M5al BWI76_RS02165 D-allose transporter subunit insig. 35 77
  Azospirillum sp. SherDot2 MPMX19_03310 Ribose import binding protein RbsB insig. 31 90
  Pantoea sp. MT58 IAI47_10010 substrate-binding domain-containing protein insig. 30 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS12035 ABC transporter substrate-binding protein insig. 29 95
  Rhizobium sp. OAE497 ABIE40_RS24670 D-ribose ABC transporter substrate-binding protein insig. 33 91
  Paraburkholderia graminis OAS925 ABIE53_006102 erythritol transport system substrate-binding protein insig. 32 99
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS15215 D-ribose ABC transporter substrate-binding protein insig. 32 78
  Paraburkholderia graminis OAS925 ABIE53_005429 ribose transport system substrate-binding protein insig. 29 90
  Agrobacterium fabrum C58 Atu2817 ABC transporter, substrate binding protein (ribose) strong 31 90
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1005 Ribose ABC transport system, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) insig. 29 82
  Paraburkholderia sabiae LMG 24235 QEN71_RS11420 ABC transporter substrate-binding protein insig. 29 97
  Paraburkholderia sabiae LMG 24235 QEN71_RS38420 D-ribose ABC transporter substrate-binding protein insig. 32 99
  Burkholderia phytofirmans PsJN BPHYT_RS27195 LacI family transcriptional regulator strong 30 90
  Azospirillum sp. SherDot2 MPMX19_03760 Ribose import binding protein RbsB insig. 32 87
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03378 monosaccharide ABC transporter substrate-binding protein, CUT2 family insig. 29 93
  Pantoea sp. MT58 IAI47_11815 D-ribose ABC transporter substrate-binding protein insig. 31 91
  Burkholderia phytofirmans PsJN BPHYT_RS22745 sugar ABC transporter no data 29 98
  Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1284 ABC-type sugar transport system, periplasmic component insig. 30 80
  Paraburkholderia graminis OAS925 ABIE53_004065 fructose transport system substrate-binding protein insig. 29 98
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03226 mannose-binding protein /fructose-binding protein /ribose-binding protein insig. 29 98
  Pectobacterium carotovorum WPP14 HER17_RS09335 D-ribose ABC transporter substrate-binding protein cofit 31 85
  Rahnella sp. WP5 EX31_RS02860 sugar ABC transporter substrate-binding protein insig. 27 96
  Enterobacter asburiae PDN3 EX28DRAFT_0150 ABC-type sugar transport system, periplasmic component insig. 26 90
  Enterobacter sp. TBS_079 MPMX20_03372 Ribose import binding protein RbsB sig. 26 87
o Sinorhizobium meliloti 1021 SM_b20349 sugar ABC transporter insig. 30 77
  Caulobacter crescentus NA1000 CCNA_00902 inositol ABC transporter, periplasmic inositol-binding protein IbpA strong 29 86
  Caulobacter crescentus NA1000 Δfur CCNA_00902 inositol ABC transporter, periplasmic inositol-binding protein IbpA insig. 29 86
  Paraburkholderia sabiae LMG 24235 QEN71_RS13090 sugar ABC transporter substrate-binding protein sig. 29 90
  Agrobacterium fabrum C58 Atu1899 ABC transporter, substrate binding protein (ribose) insig. 30 85
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS15440 rhizopine-binding protein insig. 30 91
  Ralstonia solanacearum UW163 UW163_RS12900 rhizopine-binding protein insig. 30 91
  Paraburkholderia graminis OAS925 ABIE53_001869 ABC-type sugar transport system substrate-binding protein insig. 33 66
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4386 Inositol transport system sugar-binding protein sig. 30 69
  Escherichia coli BL21 ECD_02650 D-ribose-binding periplasmic protein insig. 32 91
  Pseudomonas fluorescens FW300-N2C3 AO356_23200 rhizopine-binding protein strong 29 93