Homologs of HSERO_RS07340 from Herbaspirillum seropedicae SmR1

LysR family transcriptional regulator
SEED: LysR family transcriptional regulator YbhD

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Herbaspirillum seropedicae SmR1 HSERO_RS07340 LysR family transcriptional regulator insig. 100 100
o Cupriavidus basilensis FW507-4G11 RR42_RS23045 LysR family transcriptional regulator insig. 47 97
  Cupriavidus basilensis FW507-4G11 RR42_RS28580 LysR family transcriptional regulator insig. 46 97
o Acidovorax sp. GW101-3H11 Ac3H11_4371 LysR family transcriptional regulator YbhD insig. 44 99
o Burkholderia phytofirmans PsJN BPHYT_RS27430 LysR family transcriptional regulator insig. 44 96
o Pseudomonas fluorescens SBW25 PFLU_RS07335 LysR family transcriptional regulator insig. 43 97
o Pseudomonas fluorescens SBW25-INTG PFLU_RS07335 LysR family transcriptional regulator insig. 43 97
o Pseudomonas syringae pv. syringae B728a Psyr_3165 transcriptional regulator, LysR family insig. 43 100
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3165 transcriptional regulator, LysR family insig. 43 100
o Pseudomonas simiae WCS417 PS417_07220 LysR family transcriptional regulator insig. 42 99
  Pseudomonas putida KT2440 PP_2054 putative DNA-binding transcriptional regulator sig. 39 96
o Paraburkholderia graminis OAS925 ABIE53_005445 DNA-binding transcriptional LysR family regulator insig. 44 97
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2179 LysR family transcriptional regulator YbhD insig. 42 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS08345 LysR family transcriptional regulator insig. 43 97
o Pseudomonas fluorescens FW300-N2E3 AO353_26720 LysR family transcriptional regulator insig. 44 95
o Azospirillum sp. SherDot2 MPMX19_03557 HTH-type transcriptional regulator CynR insig. 40 96
  Pseudomonas fluorescens SBW25 PFLU_RS14945 LysR family transcriptional regulator insig. 37 96
  Pseudomonas fluorescens SBW25-INTG PFLU_RS14945 LysR family transcriptional regulator strong 37 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4462 LysR family transcriptional regulator YbhD insig. 37 96
o Escherichia coli ECRC101 OKFHMN_06670 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 39 92
o Escherichia coli ECOR27 NOLOHH_23100 ybhD Uncharacterized HTH-type transcriptional regulator YbhD cofit 38 92
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3058 LysR family transcriptional regulator YbhD insig. 42 95
  Pseudomonas sp. RS175 PFR28_01942 HTH-type transcriptional regulator CynR strong 37 96
o Escherichia fergusonii Becca EFB2_03338 Hydrogen peroxide-inducible genes activator insig. 38 92
o Escherichia coli ECOR38 HEPCGN_01605 ybhD Uncharacterized HTH-type transcriptional regulator YbhD cofit 38 92
o Escherichia coli ECRC101 MCAODC_25890 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 38 92
o Escherichia coli ECRC102 NIAGMN_04720 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 38 92
o Escherichia coli ECRC62 BNILDI_21095 ybhD Uncharacterized HTH-type transcriptional regulator YbhD insig. 38 92
o Escherichia coli ECRC98 JDDGAC_10325 ybhD Uncharacterized HTH-type transcriptional regulator YbhD no data 38 92
o Escherichia coli ECRC99 KEDOAH_21295 ybhD Uncharacterized HTH-type transcriptional regulator YbhD no data 38 92
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02945 Hydrogen peroxide-inducible genes activator insig. 38 92
o Escherichia coli Nissle 1917 ECOLIN_RS04090 LysR family transcriptional regulator no data 38 92
o Escherichia coli BW25113 b0768 ybhD predicted DNA-binding transcriptional regulator (RefSeq) insig. 38 92
o Paraburkholderia sabiae LMG 24235 QEN71_RS11315 LysR family transcriptional regulator insig. 45 94
  Azospirillum brasilense Sp245 AZOBR_RS28100 LysR family transcriptional regulator insig. 39 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03335 transcriptional regulator, LysR family insig. 45 93
  Paraburkholderia graminis OAS925 ABIE53_006109 DNA-binding transcriptional LysR family regulator insig. 37 96
  Pseudomonas fluorescens FW300-N2C3 AO356_28895 LysR family transcriptional regulator insig. 36 96
  Agrobacterium fabrum C58 Atu4264 LysR family transcriptional regulator strong 38 98
  Dickeya dadantii 3937 DDA3937_RS07805 LysR family transcriptional regulator insig. 36 95
o Klebsiella michiganensis M5al BWI76_RS04365 LysR family transcriptional regulator insig. 37 95
o Enterobacter asburiae PDN3 EX28DRAFT_0581 Transcriptional regulator insig. 37 96
o Bosea sp. OAE506 ABIE41_RS16550 LysR family transcriptional regulator insig. 41 91
  Paraburkholderia sabiae LMG 24235 QEN71_RS38040 LysR family transcriptional regulator insig. 38 96
o Pantoea sp. MT58 IAI47_10140 LysR family transcriptional regulator insig. 36 95
o Enterobacter sp. TBS_079 MPMX20_02971 HTH-type transcriptional regulator CynR insig. 35 96
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS17035 LysR family transcriptional regulator insig. 39 98
  Cupriavidus basilensis FW507-4G11 RR42_RS31055 3-hydroxybutyryl-CoA dehydrogenase insig. 36 99
  Ralstonia sp. UNC404CL21Col ABZR87_RS04670 LysR family transcriptional regulator insig. 36 97
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02618 transcriptional regulator, LysR family insig. 37 97
  Burkholderia phytofirmans PsJN BPHYT_RS09930 LysR family transcriptional regulator insig. 35 97
  Azospirillum sp. SherDot2 MPMX19_02886 HTH-type transcriptional regulator CynR insig. 37 94
  Pseudomonas fluorescens FW300-N2E3 AO353_27930 LysR family transcriptional regulator strong 35 95
o Sinorhizobium meliloti 1021 SM_b20123 transcriptional regulator insig. 35 97
  Pseudomonas simiae WCS417 PS417_10530 LysR family transcriptional regulator sig. 35 94
  Pseudomonas fluorescens SBW25 PFLU_RS10590 LysR family transcriptional regulator insig. 35 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS10590 LysR family transcriptional regulator sig. 35 94
  Pseudomonas sp. RS175 PFR28_01326 HTH-type transcriptional regulator GltC sig. 35 94
  Herbaspirillum seropedicae SmR1 HSERO_RS12040 LysR family transcriptional regulator insig. 35 99
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2110 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase insig. 35 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF17 LysR family transcriptional regulator YfeR insig. 35 99
  Pseudomonas fluorescens FW300-N2C3 AO356_21655 LysR family transcriptional regulator insig. 34 94
o Variovorax sp. SCN45 GFF6064 Transcriptional regulator YfeR, LysR family no data 33 93
  Variovorax sp. SCN45 GFF2416 Transcriptional regulator YbhD, LysR family insig. 33 98
  Paraburkholderia sabiae LMG 24235 QEN71_RS23130 LysR family transcriptional regulator insig. 35 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_5832 LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase no data 34 94
  Burkholderia phytofirmans PsJN BPHYT_RS08035 LysR family transcriptional regulator insig. 34 96
o Rhodospirillum rubrum S1H Rru_A1466 Transcriptional Regulator, LysR family (NCBI) insig. 33 96
  Variovorax sp. SCN45 GFF6826 Transcriptional regulator, LysR family no data 37 94
  Cupriavidus basilensis FW507-4G11 RR42_RS03425 LysR family transcriptional regulator insig. 33 95
  Enterobacter sp. TBS_079 MPMX20_01913 HTH-type transcriptional regulator GltC insig. 32 97
o Serratia liquefaciens MT49 IAI46_18415 LysR family transcriptional regulator insig. 32 96
o Rahnella sp. WP5 EX31_RS20145 LysR family transcriptional regulator insig. 31 96
  Bosea sp. OAE506 ABIE41_RS12415 LysR family transcriptional regulator insig. 33 95
  Pseudomonas syringae pv. syringae B728a Psyr_3236 transcriptional regulator, LysR family strong 33 96
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3236 transcriptional regulator, LysR family insig. 33 96
  Burkholderia phytofirmans PsJN BPHYT_RS29880 LysR family transcriptional regulator no data 37 95
  Dickeya dianthicola 67-19 HGI48_RS00115 LysR family transcriptional regulator insig. 32 96
  Enterobacter asburiae PDN3 EX28DRAFT_1707 Transcriptional regulator insig. 31 97
  Herbaspirillum seropedicae SmR1 HSERO_RS11120 LysR family transcriptional regulator insig. 33 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03809 transcriptional regulator, LysR family insig. 33 92
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03015 transcriptional regulator, LysR family insig. 35 93
o Variovorax sp. OAS795 ABID97_RS27955 LysR family transcriptional regulator insig. 33 93
  Acidovorax sp. GW101-3H11 Ac3H11_2899 Probable LysR-family transcriptional regulator insig. 33 94
  Paraburkholderia graminis OAS925 ABIE53_004438 DNA-binding transcriptional LysR family regulator insig. 33 93
  Variovorax sp. OAS795 ABID97_RS05470 LysR family transcriptional regulator no data 32 98
  Variovorax sp. OAS795 ABID97_RS25980 LysR family transcriptional regulator insig. 31 97
  Dickeya dadantii 3937 DDA3937_RS21150 LysR family transcriptional regulator insig. 31 95
  Dickeya dianthicola ME23 DZA65_RS00130 LysR family transcriptional regulator insig. 31 96
  Cupriavidus basilensis FW507-4G11 RR42_RS31330 LysR family transcriptional regulator insig. 34 96
  Paraburkholderia graminis OAS925 ABIE53_005079 DNA-binding transcriptional LysR family regulator insig. 34 93
  Paraburkholderia graminis OAS925 ABIE53_001823 DNA-binding transcriptional LysR family regulator insig. 33 96
  Escherichia coli ECOR27 NOLOHH_18985 LysR family transcriptional regulator no data 31 97
  Escherichia coli ECRC62 BNILDI_17470 LysR family transcriptional regulator insig. 31 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS05100 LysR family transcriptional regulator insig. 34 96
o Ralstonia solanacearum UW163 UW163_RS08525 LysR family transcriptional regulator insig. 34 96
  Pseudomonas fluorescens SBW25 PFLU_RS21345 LysR family transcriptional regulator insig. 32 95
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21345 LysR family transcriptional regulator sig. 32 95
  Variovorax sp. SCN45 GFF885 Transcriptional regulator, LysR family insig. 32 98
  Burkholderia phytofirmans PsJN BPHYT_RS20345 LysR family transcriptional regulator insig. 31 96