Homologs of HMPREF1078_RS07920 from Parabacteroides merdae CL09T00C40

recombinase family protein
SEED: Site-specific recombinase, resolvase family

90 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS07920 recombinase family protein sig. 100 100
  Bacteroides stercoris CC31F HMPREF1181_RS10855 master DNA invertase Mpi family serine-type recombinase insig. 43 96
  Phocaeicola dorei CL03T12C01 ABI39_RS05885 master DNA invertase Mpi family serine-type recombinase insig. 37 97
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS11160 master DNA invertase Mpi family serine-type recombinase insig. 37 97
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS15975 master DNA invertase Mpi family serine-type recombinase insig. 35 98
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS02385 recombinase family protein strong 38 98
  Bacteroides thetaiotaomicron VPI-5482 BT4624 putative resolvase (NCBI ptt file) insig. 35 100
  Bacteroides ovatus ATCC 8483 BACOVA_05418 resolvase, N-terminal domain protein insig. 35 99
  Phocaeicola dorei CL03T12C01 ABI39_RS07485 master DNA invertase Mpi family serine-type recombinase insig. 35 100
  Shewanella oneidensis MR-1 SOA0172 site-specific recombinase, resolvase family (NCBI ptt file) strong 31 98
  Methanococcus maripaludis S2 MMP_RS03990 recombinase family protein insig. 26 97
  Ralstonia solanacearum UW163 UW163_RS01540 recombinase family protein insig. 28 94
  Erwinia tracheiphila SCR3 LU632_RS07385 recombinase family protein insig. 27 97
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12085 recombinase family protein insig. 29 94
  Variovorax sp. SCN45 GFF7081 Mobile element protein no data 26 97
  Ralstonia solanacearum PSI07 RPSI07_RS15555 recombinase family protein insig. 26 93
  Methanococcus maripaludis JJ MMJJ_RS02615 recombinase family protein no data 24 97
  Dechlorosoma suillum PS Dsui_2526 site-specific recombinase, DNA invertase Pin insig. 26 95
  Rhodospirillum rubrum S1H Rru_B0010 Resolvase (NCBI) insig. 27 97
  Azospirillum sp. SherDot2 MPMX19_01561 DNA-invertase hin insig. 27 96
  Azospirillum sp. SherDot2 MPMX19_01313 DNA-invertase hin insig. 26 96
  Variovorax sp. SCN45 GFF7128 Mobile element protein no data 26 74
  Erwinia tracheiphila SCR3 LU632_RS04400 recombinase family protein insig. 27 95
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1543 DNA-invertase insig. 25 96
  Shewanella oneidensis MR-1 SOA0019 ISSod9, DNA-invertase (NCBI ptt file) no data 24 97
  Shewanella oneidensis MR-1 SOA0170 ISSod9, DNA-invertase (NCBI ptt file) no data 24 97
  Paraburkholderia graminis OAS925 ABIE53_000503 DNA invertase Pin-like site-specific DNA recombinase sig. 24 100
  Shewanella loihica PV-4 Shew_0991 resolvase domain-containing protein (RefSeq) no data 25 97
  Dinoroseobacter shibae DFL-12 Dshi_3680 Resolvase domain (RefSeq) no data 25 95
  Dinoroseobacter shibae DFL-12 Dshi_3876 Resolvase domain (RefSeq) no data 25 95
  Dinoroseobacter shibae DFL-12 Dshi_4081 Resolvase domain (RefSeq) no data 25 95
  Escherichia coli Nissle 1917 ECOLIN_RS26325 recombinase family protein insig. 23 93
  Magnetospirillum magneticum AMB-1 AMB_RS16710 recombinase family protein insig. 26 96
  Escherichia coli BW25113 b1545 pinQ Qin prophage; predicted site-specific recombinase (NCBI) insig. 24 97
  Vibrio cholerae E7946 ATCC 55056 CSW01_18145 resolvase cofit 25 85
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02167 Tn3 family transposase ISYps3 cofit 24 97
  Pseudomonas stutzeri RCH2 Psest_4043 Site-specific recombinases, DNA invertase Pin homologs insig. 27 97
  Shewanella loihica PV-4 Shew_3862 resolvase domain-containing protein (RefSeq) insig. 28 68
  Escherichia coli BL21 ECD_01345 Rac prophage; putative site-specific recombinase no data 24 97
  Escherichia coli BL21 ECD_01504 Qin prophage; putative site-specific recombinase no data 24 97
  Escherichia coli ECOR27 NOLOHH_18610 pinR Serine recombinase PinR cofit 24 97
  Escherichia coli BW25113 b1374 pinR Rac prophage; predicted site-specific recombinase (NCBI) no data 24 97
  Pseudomonas syringae pv. syringae B728a Psyr_2668 Helix-turn-helix, Fis-type insig. 23 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2668 Helix-turn-helix, Fis-type insig. 23 97
  Magnetospirillum magneticum AMB-1 AMB_RS15985 recombinase family protein cofit 26 96
  Dinoroseobacter shibae DFL-12 Dshi_3853 Resolvase domain (RefSeq) insig. 29 74
  Erwinia tracheiphila SCR3 LU632_RS10615 recombinase family protein insig. 25 95
  Alteromonas macleodii MIT1002 MIT1002_02482 DNA-invertase hin insig. 24 98
  Dinoroseobacter shibae DFL-12 Dshi_4105 Resolvase domain (RefSeq) insig. 29 74
  Dechlorosoma suillum PS Dsui_2500 site-specific recombinase, DNA invertase Pin cofit 27 73
  Azospirillum sp. SherDot2 MPMX19_06437 DNA-invertase hin insig. 23 96
  Erwinia tracheiphila SCR3 LU632_RS26065 recombinase family protein insig. 23 84
  Dinoroseobacter shibae DFL-12 Dshi_4026 Resolvase domain (RefSeq) insig. 34 49
  Shewanella sp. ANA-3 Shewana3_4319 resolvase domain-containing protein (RefSeq) insig. 24 85
  Escherichia coli ECOR27 NOLOHH_15375 recombinase family protein cofit 29 74
  Kangiella aquimarina DSM 16071 B158DRAFT_0960 Site-specific recombinases, DNA invertase Pin homologs insig. 25 96
  Escherichia coli ECRC100 OKFHMN_11730 spoIVCA resolvase cofit 25 94
  Escherichia coli ECRC101 MCAODC_02245 spoIVCA resolvase insig. 25 94
  Escherichia coli ECRC102 NIAGMN_09580 spoIVCA resolvase insig. 25 94
  Escherichia coli ECRC99 KEDOAH_16415 spoIVCA resolvase no data 25 94
  Dinoroseobacter shibae DFL-12 Dshi_3748 Resolvase domain (RefSeq) insig. 34 49
  Azospirillum brasilense Sp245 AZOBR_RS20835 DNA resolvase no data 27 79
  Escherichia coli ECRC98 JDDGAC_09160 spoIVCA DNA-invertase strong 26 96
  Enterobacter sp. TBS_079 MPMX20_04027 Serine recombinase PinR insig. 29 52
  Escherichia coli ECRC101 MCAODC_20820 spoIVCA DNA-invertase insig. 25 96
  Azospirillum brasilense Sp245 AZOBR_RS24920 resolvase insig. 28 74
  Azospirillum sp. SherDot2 MPMX19_06438 DNA-invertase hin insig. 25 96
  Erwinia tracheiphila SCR3 LU632_RS10670 recombinase family protein insig. 22 97
  Erwinia tracheiphila SCR3 LU632_RS04540 recombinase family protein insig. 29 62
  Escherichia coli ECOR38 HEPCGN_26710 spoIVCA DNA-invertase insig. 24 96
  Dinoroseobacter shibae DFL-12 Dshi_4084 Resolvase domain (RefSeq) insig. 27 72
  Escherichia fergusonii Becca EFB2_03222 DNA-invertase hin insig. 24 96
  Agrobacterium fabrum C58 Atu6046 DNA invertase insig. 27 74
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3230.1 Phage DNA invertase insig. 24 96
  Paraburkholderia sabiae LMG 24235 QEN71_RS33400 helix-turn-helix domain-containing protein no data 23 67
  Pseudomonas putida KT2440 PP_1116 Site-specific recombinase, resolvase family insig. 27 75
  Escherichia coli ECRC100 OKFHMN_09410 pinE site-specific DNA recombinase cofit 27 75
  Escherichia coli ECRC98 JDDGAC_13045 pinE site-specific DNA recombinase insig. 27 75
  Klebsiella michiganensis M5al BWI76_RS12375 DNA-invertase hin sig. 24 97
  Dinoroseobacter shibae DFL-12 Dshi_3683 Resolvase domain (RefSeq) insig. 24 99
  Cupriavidus basilensis FW507-4G11 RR42_RS00040 recombinase insig. 29 68
  Pseudomonas stutzeri RCH2 Psest_3156 Site-specific recombinases, DNA invertase Pin homologs insig. 26 68
  Escherichia coli BW25113 b0278 yagL CP4-6 prophage; DNA-binding protein (NCBI) insig. 28 71
  Desulfovibrio vulgaris Miyazaki F DvMF_2725 Resolvase domain protein (RefSeq) insig. 29 75
  Shewanella sp. ANA-3 Shewana3_2637 resolvase domain-containing protein (RefSeq) insig. 26 67
  Escherichia coli ECRC101 MCAODC_00110 pinE site-specific DNA recombinase insig. 27 75
  Escherichia coli ECRC102 NIAGMN_07460 pinE site-specific DNA recombinase insig. 27 75
  Bacteroides stercoris CC31F HMPREF1181_RS05010 recombinase family protein cofit 26 86
  Fusobacterium nucleatum SB010 HUW76_10835 recombinase family protein cofit 26 69
  Escherichia fergusonii Becca EFB2_03773 DNA-invertase hin insig. 24 82