Homologs of GFF5154 from Sphingobium sp. HT1-2

L,D-transpeptidase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Sphingobium sp. HT1-2 GFF5154 L,D-transpeptidase insig. 100 100
  Sphingobium sp. HT1-2 GFF2124 L,D-transpeptidase cofit 51 87
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0719 Uncharacterized protein conserved in bacteria strong 49 88
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1169.1 ErfK/YbiS/YcfS/YnhG family protein insig. 44 85
  Lysobacter sp. OAE881 ABIE51_RS10880 L,D-transpeptidase insig. 42 86
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03880 L,D-transpeptidase family protein insig. 37 92
  Sinorhizobium meliloti 1021 SMc01575 hypothetical protein strong 37 85
o Variovorax sp. OAS795 ABID97_RS27685 L,D-transpeptidase family protein insig. 36 87
  Rhizobium sp. OAE497 ABIE40_RS12005 L,D-transpeptidase cofit 36 87
  Sinorhizobium meliloti 1021 SM_b21573 hypothetical protein insig. 36 87
  Rhizobium sp. OAE497 ABIE40_RS27810 L,D-transpeptidase insig. 37 84
  Agrobacterium fabrum C58 Atu2133 hypothetical protein strong 35 86
  Acinetobacter radioresistens SK82 MPMX26_00975 hypothetical protein strong 33 87
  Acinetobacter baumannii LAC-4 RR41_RS05540 L,D-transpeptidase insig. 33 87
  Bosea sp. OAE506 ABIE41_RS06555 L,D-transpeptidase insig. 33 89
  Pseudomonas stutzeri RCH2 Psest_2334 Uncharacterized protein conserved in bacteria strong 26 48
  Synechococcus elongatus PCC 7942 Synpcc7942_0647 hypothetical protein sig. 32 33
  Pseudomonas sp. RS175 PFR28_00960 hypothetical protein strong 24 63
  Pseudomonas sp. BP01 JOY50_RS25815 L,D-transpeptidase family protein insig. 37 21
  Synechocystis sp000284455 PCC 6803 SGL_RS13015 L,D-transpeptidase sig. 28 33
  Rhodopseudomonas palustris CGA009 TX73_021875 L,D-transpeptidase insig. 47 15
  Pseudomonas putida KT2440 PP_2320 conserved exported protein of unknown function strong 38 19
  Marinobacter adhaerens HP15 HP15_3824 ErfK/YbiS/YcfS/YnhG family protein strong 38 18
  Pseudomonas sp. SVBP6 COO64_RS09790 L,D-transpeptidase family protein insig. 36 21
  Bosea sp. OAE506 ABIE41_RS21100 L,D-transpeptidase insig. 39 17
  Azospirillum sp. SherDot2 MPMX19_04296 hypothetical protein insig. 30 32
  Pseudomonas syringae pv. syringae B728a Psyr_2070 ErfK/YbiS/YcfS/YnhG strong 23 63
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2070 ErfK/YbiS/YcfS/YnhG insig. 23 63
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2221 ErfK/YbiS/YcfS/YnhG family protein strong 23 63
  Bosea sp. OAE506 ABIE41_RS22060 L,D-transpeptidase insig. 41 16
  Pseudomonas sp. S08-1 OH686_01780 L,D-transpeptidase strong 37 21
  Pseudomonas aeruginosa PA14 IKLFDK_14500 YkuD domain-containing protein cofit 34 21
  Pseudomonas sp. DMC3 GFF4626 putative L,D-transpeptidase YbiS cofit 23 63
  Rhodopseudomonas palustris CGA009 TX73_018480 L,D-transpeptidase insig. 46 15
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_292 ErfK/YbiS/YcfS/YnhG family protein strong 34 21
  Agrobacterium fabrum C58 Atu0669 hypothetical protein insig. 39 18
  Pseudomonas fluorescens FW300-N2E3 AO353_19015 hypothetical protein strong 37 20
  Pseudomonas fluorescens FW300-N2C3 AO356_03215 hypothetical protein strong 34 21
  Sinorhizobium meliloti 1021 SMc00924 hypothetical protein insig. 39 18
  Phaeobacter inhibens DSM 17395 PGA1_c17320 Uncharacterized protein conserved in bacteria strong 38 17
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2474 ErfK/YbiS/YcfS/YnhG family protein strong 23 63
  Dinoroseobacter shibae DFL-12 Dshi_3496 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) insig. 43 16
  Rhizobium sp. OAE497 ABIE40_RS03585 L,D-transpeptidase insig. 39 18
  Bosea sp. OAE506 ABIE41_RS14200 L,D-transpeptidase insig. 39 17
  Klebsiella michiganensis M5al BWI76_RS09030 transpeptidase strong 23 63
  Pseudomonas segetis P6 MPMX49_02652 putative L,D-transpeptidase YbiS strong 34 21
  Pseudomonas fluorescens SBW25 PFLU_RS08365 L,D-transpeptidase family protein cofit 23 63
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08365 L,D-transpeptidase family protein strong 23 63
  Pseudomonas simiae WCS417 PS417_08415 hypothetical protein strong 23 63
  Bosea sp. OAE506 ABIE41_RS10175 L,D-transpeptidase insig. 45 15
  Escherichia coli BL21 ECD_00786 L,D-transpeptidase linking Lpp to murein strong 38 19
  Escherichia fergusonii Becca EFB2_03286 putative L,D-transpeptidase YbiS cofit 38 19
  Escherichia coli ECOR27 NOLOHH_22515 ldtB L,D-transpeptidase strong 38 19
  Escherichia coli ECOR38 HEPCGN_01875 ldtB L,D-transpeptidase strong 38 19
  Escherichia coli ECRC100 OKFHMN_06165 ldtB L,D-transpeptidase cofit 38 19
  Escherichia coli ECRC101 MCAODC_25380 ldtB L,D-transpeptidase strong 38 19
  Escherichia coli ECRC102 NIAGMN_04210 ldtB L,D-transpeptidase cofit 38 19
  Escherichia coli ECRC62 BNILDI_20795 ldtB L,D-transpeptidase strong 38 19
  Escherichia coli ECRC98 JDDGAC_09800 ldtB L,D-transpeptidase strong 38 19
  Escherichia coli ECRC99 KEDOAH_21745 ldtB L,D-transpeptidase no data 38 19
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02894 putative L,D-transpeptidase YbiS cofit 38 19
  Escherichia coli Nissle 1917 ECOLIN_RS04365 L,D-transpeptidase no data 38 19
  Escherichia coli BW25113 b0819 ybiS hypothetical protein (NCBI) strong 38 19
  Pantoea sp. MT58 IAI47_13415 L,D-transpeptidase family protein strong 23 58
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01816 hypothetical protein cofit 23 63
  Rhizobium sp. OAE497 ABIE40_RS26600 L,D-transpeptidase insig. 39 18
  Bosea sp. OAE506 ABIE41_RS08190 L,D-transpeptidase insig. 40 16
  Xanthobacter sp. DMC5 GFF4149 hypothetical protein no data 39 17
  Enterobacter sp. TBS_079 MPMX20_01456 putative L,D-transpeptidase YbiS sig. 38 19
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF716 L,D-transpeptidase YbiS cofit 23 58
  Klebsiella pneumoniae MKP103 KDGMDA_17285 L D-transpeptidase strong 23 58
  Enterobacter asburiae PDN3 EX28DRAFT_1681 Uncharacterized protein conserved in bacteria insig. 23 59
  Dinoroseobacter shibae DFL-12 Dshi_3406 ErfK/YbiS/YcfS/YnhG family protein (RefSeq) insig. 49 12
  Rhodopseudomonas palustris CGA009 TX73_001100 L,D-transpeptidase cofit 42 16
  Rhizobium sp. OAE497 ABIE40_RS05790 L,D-transpeptidase insig. 42 15
  Enterobacter asburiae PDN3 EX28DRAFT_2148 Uncharacterized protein conserved in bacteria strong 38 19
  Serratia liquefaciens MT49 IAI46_02600 L,D-transpeptidase family protein insig. 24 58
  Rhodopseudomonas palustris CGA009 TX73_005880 L,D-transpeptidase insig. 41 16
  Rhodopseudomonas palustris CGA009 TX73_018715 L,D-transpeptidase family protein no data 39 17
  Phaeobacter inhibens DSM 17395 PGA1_c34770 Uncharacterized protein conserved in bacteria sig. 38 18
  Rhodopseudomonas palustris CGA009 TX73_024925 L,D-transpeptidase insig. 43 15
  Rhodopseudomonas palustris CGA009 TX73_008305 L,D-transpeptidase insig. 39 15
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3564 L,D-transpeptidase YnhG insig. 36 19
  Klebsiella michiganensis M5al BWI76_RS16970 murein L,D-transpeptidase sig. 36 18
  Escherichia coli BL21 ECD_01647 murein L,D-transpeptidase no data 38 18
  Escherichia fergusonii Becca EFB2_02314 putative L,D-transpeptidase YnhG insig. 38 18
  Escherichia coli ECOR27 NOLOHH_17800 ldtE L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli ECOR38 HEPCGN_05665 ldtE L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli ECRC100 OKFHMN_27280 ldtE L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli ECRC101 MCAODC_18130 ldtE L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli ECRC102 NIAGMN_00785 ldtE L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli ECRC62 BNILDI_16590 ldtE L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli ECRC98 JDDGAC_01855 ldtE L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli ECRC99 KEDOAH_00830 ldtE L,D-transpeptidase LdtE no data 38 18
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02046 putative L,D-transpeptidase YnhG insig. 38 18
  Escherichia coli Nissle 1917 ECOLIN_RS09385 L,D-transpeptidase LdtE insig. 38 18
  Escherichia coli BW25113 b1678 ynhG hypothetical protein (NCBI) insig. 38 18
  Xanthobacter sp. DMC5 GFF2633 putative L,D-transpeptidase YbiS insig. 47 14
  Enterobacter sp. TBS_079 MPMX20_01949 putative L,D-transpeptidase YnhG insig. 23 59
  Enterobacter asburiae PDN3 EX28DRAFT_0563 Uncharacterized protein conserved in bacteria insig. 33 25