| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Xanthobacter sp. DMC5 | GFF22 | | HTH-type transcriptional regulator HdfR | insig. | 100 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_19015 | | LysR family transcriptional regulator | insig. | 35 | 97 |
| o | Variovorax sp. OAS795 | ABID97_RS22240 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS21070 | | LysR family transcriptional regulator | insig. | 34 | 97 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21070 | | LysR family transcriptional regulator | sig. | 34 | 97 |
| | Rhodopseudomonas palustris CGA009 | TX73_008980 | | LysR family transcriptional regulator | insig. | 32 | 96 |
| | Marinobacter adhaerens HP15 | HP15_2680 | | protein containing LysR, substrate-binding / Bacterial regulatory protein, LysR | insig. | 32 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS35930 | | LysR family transcriptional regulator | insig. | 33 | 96 |
| o | Variovorax sp. SCN45 | GFF6721 | | Transcriptional regulator, LysR family | insig. | 33 | 97 |
| | Azospirillum sp. SherDot2 | MPMX19_04948 | | HTH-type transcriptional regulator GltR | insig. | 32 | 90 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS09175 | | LysR family transcriptional regulator | insig. | 29 | 96 |
| | Sphingobium sp. HT1-2 | GFF355 | | Transcriptional regulator Swit_0960, LysR family | cofit | 38 | 83 |
| | Pseudomonas putida KT2440 | PP_4579 | | Transcriptional regulator, LysR family | strong | 34 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS01460 | | LysR family transcriptional regulator | insig. | 33 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS05175 | | LysR family transcriptional regulator | insig. | 31 | 97 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS35310 | | LysR family transcriptional regulator | insig. | 32 | 97 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01709 | | HTH-type transcriptional regulator HdfR | cofit | 32 | 90 |
| | Pseudomonas sp. BP01 | JOY50_RS05240 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| | Variovorax sp. SCN45 | GFF620 | | Transcriptional regulator, LysR family | insig. | 33 | 90 |
| | Pseudomonas sp. SVBP6 | COO64_RS22255 | | LysR family transcriptional regulator | insig. | 32 | 90 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3364 | | Cyn operon transcriptional activator | insig. | 31 | 97 |
| | Pseudomonas sp. DMC3 | GFF2325 | | HTH-type transcriptional regulator GltR | cofit | 32 | 90 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4480 | | Cyn operon transcriptional activator | insig. | 30 | 90 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_17985 | | LysR family transcriptional regulator | sig. | 31 | 90 |
| | Acinetobacter baumannii LAC-4 | RR41_RS10535 | | LysR family transcriptional regulator MumR | insig. | 29 | 96 |
| | Sinorhizobium meliloti 1021 | SMa0498 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS16795 | | LysR family transcriptional regulator | strong | 31 | 83 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_10320 | | LysR family transcriptional regulator | no data | 31 | 83 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS39080 | | LysR family transcriptional regulator | strong | 31 | 83 |
| | Dinoroseobacter shibae DFL-12 | Dshi_3151 | | transcriptional regulator, LysR family (RefSeq) | insig. | 30 | 97 |
| | Variovorax sp. SCN45 | GFF5955 | | Transcriptional regulator, LysR family | insig. | 33 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS05235 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19340 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05280 | | LysR family transcriptional regulator | insig. | 31 | 95 |
| | Pseudomonas sp. BP01 | JOY50_RS13610 | | LysR family transcriptional regulator | no data | 30 | 95 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_488 | | Cyn operon transcriptional activator | insig. | 28 | 90 |
| | Pseudomonas sp. RS175 | PFR28_01891 | | HTH-type transcriptional regulator GltR | strong | 28 | 90 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1155 | | Cyn operon transcriptional activator | strong | 28 | 90 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_1768 | | LysR family transcriptional regulator y2377 (Yersinia pestis KIM) | insig. | 30 | 91 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26385 | | LysR family transcriptional regulator | insig. | 28 | 90 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_01626 | | HTH-type transcriptional regulator GltR | cofit | 30 | 85 |
| | Variovorax sp. OAS795 | ABID97_RS27660 | | LysR family transcriptional regulator | insig. | 32 | 90 |
| | Pseudomonas simiae WCS417 | PS417_07465 | | LysR family transcriptional regulator | insig. | 29 | 85 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1158 | | Cyn operon transcriptional activator | insig. | 29 | 85 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS07550 | | LysR family transcriptional regulator | insig. | 28 | 96 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS07550 | | LysR family transcriptional regulator | strong | 28 | 96 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27710 | | LysR family transcriptional regulator | insig. | 30 | 88 |
| | Pseudomonas orientalis W4I3 | QF045_RS10115 | | LysR family transcriptional regulator | insig. | 30 | 85 |
| | Pseudomonas sp. BP01 | JOY50_RS04210 | | LysR family transcriptional regulator | no data | 30 | 90 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_26400 | | LysR family transcriptional regulator | insig. | 28 | 85 |
| | Xanthobacter sp. DMC5 | GFF44 | | HTH-type transcriptional regulator GltR | insig. | 30 | 79 |
| | Dechlorosoma suillum PS | Dsui_1858 | | transcriptional regulator | insig. | 33 | 81 |
| | Pseudomonas sp. RS175 | PFR28_01894 | | HTH-type transcriptional regulator HdfR | insig. | 27 | 90 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0511 | | transcriptional regulator, LysR family (RefSeq) | insig. | 33 | 85 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19620 | | LysR family transcriptional regulator | insig. | 38 | 53 |
| | Paraburkholderia graminis OAS925 | ABIE53_006554 | | DNA-binding transcriptional LysR family regulator | insig. | 30 | 90 |
| | Variovorax sp. OAS795 | ABID97_RS27255 | | LysR substrate-binding domain-containing protein | insig. | 29 | 84 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS11470 | | LysR family transcriptional regulator | insig. | 26 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30475 | | LysR family transcriptional regulator | insig. | 39 | 49 |
| | Azospirillum brasilense Sp245 | AZOBR_RS13110 | | LysR family transcriptional regulator | no data | 40 | 45 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS13975 | | LysR family transcriptional regulator | insig. | 39 | 48 |
| | Paraburkholderia graminis OAS925 | ABIE53_002962 | | DNA-binding transcriptional LysR family regulator | insig. | 38 | 51 |
| | Xanthobacter sp. DMC5 | GFF3932 | | HTH-type transcriptional regulator HdfR | no data | 33 | 77 |
| | Rhizobium sp. OAE497 | ABIE40_RS16300 | | LysR substrate-binding domain-containing protein | insig. | 31 | 85 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS04990 | | LysR family transcriptional regulator | insig. | 37 | 50 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17225 | | LysR family transcriptional regulator | insig. | 34 | 58 |
| | Dinoroseobacter shibae DFL-12 | Dshi_4198 | | transcriptional regulator, LysR family (RefSeq) | insig. | 35 | 51 |
| | Acinetobacter radioresistens SK82 | MPMX26_00849 | | HTH-type transcriptional regulator GltC | insig. | 27 | 87 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08360 | | LysR family transcriptional regulator | insig. | 25 | 90 |
| | Azospirillum sp. SherDot2 | MPMX19_05182 | | HTH-type transcriptional regulator HdfR | no data | 39 | 45 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32260 | | LysR substrate-binding domain-containing protein | insig. | 38 | 46 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_04446 | | transcriptional regulator, LysR family | insig. | 38 | 49 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05275 | | transcriptional regulator, LysR family | insig. | 29 | 90 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_12265 | | LysR family transcriptional regulator | insig. | 30 | 80 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS36045 | | LysR substrate-binding domain-containing protein | insig. | 30 | 80 |
| | Pseudomonas sp. S08-1 | OH686_10480 | | Transcriptional regulator, LysR family | insig. | 30 | 79 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS05170 | | LysR substrate-binding domain-containing protein | insig. | 30 | 80 |
| | Agrobacterium fabrum C58 | Atu0654 | | transcriptional regulator, LysR family | strong | 28 | 79 |
| | Pseudomonas orientalis W4I3 | QF045_RS04100 | | LysR family transcriptional regulator | cofit | 34 | 53 |
| | Azospirillum sp. SherDot2 | MPMX19_06476 | | HTH-type transcriptional regulator ArgP | insig. | 39 | 46 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS09325 | | LysR family transcriptional regulator | insig. | 39 | 41 |
| | Sphingobium sp. HT1-2 | GFF3394 | | Transcriptional regulator CidR, LysR family | insig. | 34 | 47 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS16615 | | LysR family transcriptional regulator | insig. | 27 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_00224 | | HTH-type transcriptional regulator GltC | insig. | 31 | 57 |
| | Acinetobacter baumannii LAC-4 | RR41_RS01910 | | LysR family transcriptional regulator | insig. | 27 | 70 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_1522 | | Transcriptional regulators, LysR family | insig. | 36 | 51 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS23900 | | LysR family transcriptional regulator | insig. | 27 | 90 |
| | Paraburkholderia graminis OAS925 | ABIE53_001823 | | DNA-binding transcriptional LysR family regulator | insig. | 31 | 79 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS07215 | | LysR family transcriptional regulator | insig. | 31 | 77 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23130 | | LysR family transcriptional regulator | insig. | 29 | 79 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS22460 | | LysR family transcriptional regulator | insig. | 26 | 87 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_14455 | | LysR family transcriptional regulator | insig. | 35 | 56 |
| | Agrobacterium fabrum C58 | Atu3889 | | LysR family transcriptional regulator | insig. | 31 | 85 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS08035 | | LysR family transcriptional regulator | insig. | 31 | 79 |
| | Rhizobium sp. OAE497 | ABIE40_RS03500 | | LysR substrate-binding domain-containing protein | strong | 28 | 79 |
| | Dinoroseobacter shibae DFL-12 | Dshi_2777 | | transcriptional regulator, LysR family (RefSeq) | insig. | 32 | 51 |
| | Alteromonas macleodii MIT1002 | MIT1002_00554 | | HTH-type transcriptional regulator YofA | insig. | 31 | 49 |
| | Pseudomonas sp. DMC3 | GFF1421 | | HTH-type transcriptional regulator GltR | insig. | 39 | 41 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS13245 | | LysR family transcriptional regulator | cofit | 37 | 44 |
| | Ralstonia solanacearum UW163 | UW163_RS00325 | | LysR family transcriptional regulator | insig. | 37 | 44 |