| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2103 | | LysR family transcriptional regulator YfiE | insig. | 100 | 100 |
| o | Escherichia coli ECRC100 | OKFHMN_21355 | yfiE | Uncharacterized HTH-type transcriptional regulator YfiE | insig. | 79 | 97 |
| o | Escherichia coli ECRC101 | MCAODC_11885 | yfiE | Uncharacterized HTH-type transcriptional regulator YfiE | insig. | 79 | 97 |
| o | Escherichia coli ECRC102 | NIAGMN_19125 | yfiE | Uncharacterized HTH-type transcriptional regulator YfiE | insig. | 79 | 97 |
| o | Escherichia coli ECRC98 | JDDGAC_25020 | yfiE | Uncharacterized HTH-type transcriptional regulator YfiE | insig. | 79 | 97 |
| o | Escherichia coli ECRC99 | KEDOAH_06865 | yfiE | Uncharacterized HTH-type transcriptional regulator YfiE | no data | 79 | 97 |
| o | Escherichia coli ECOR27 | NOLOHH_13025 | yfiE | Uncharacterized HTH-type transcriptional regulator YfiE | insig. | 79 | 97 |
| o | Escherichia fergusonii Becca | EFB2_01319 | | HTH-type transcriptional activator CmpR | insig. | 79 | 97 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS14585 | | LysR family transcriptional regulator | no data | 79 | 97 |
| o | Escherichia coli BL21 | ECD_02471 | | putative DNA-binding transcriptional regulator | insig. | 78 | 97 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01129 | | HTH-type transcriptional activator CmpR | insig. | 78 | 97 |
| o | Escherichia coli BW25113 | b2577 | yfiE | putative transcriptional regulator LYSR-type (VIMSS) | insig. | 78 | 97 |
| o | Escherichia coli ECRC62 | BNILDI_11830 | yfiE | Uncharacterized HTH-type transcriptional regulator YfiE | insig. | 78 | 97 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_13715 | | LysR family transcriptional regulator | insig. | 80 | 96 |
| | Escherichia coli ECOR38 | HEPCGN_20480 | | LysR substrate-binding domain-containing protein | insig. | 83 | 54 |
| | Escherichia coli ECOR38 | HEPCGN_20485 | | LysR family transcriptional regulator | insig. | 73 | 42 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0511 | | transcriptional regulator, LysR family (RefSeq) | insig. | 32 | 95 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1151 | | transcriptional regulator, LysR family (RefSeq) | insig. | 31 | 84 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25465 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 30 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS57915 | pycR;inference=COORDINATES | LysR family transcriptional regulator PycR | strong | 30 | 95 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26240 | | LysR family transcriptional regulator PycR | strong | 30 | 95 |
| | Dechlorosoma suillum PS | Dsui_1858 | | transcriptional regulator | insig. | 28 | 95 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0399 | | Transcriptional regulator | sig. | 28 | 95 |
| | Dickeya dadantii 3937 | DDA3937_RS09260 | | LysR family transcriptional regulator | insig. | 29 | 95 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS13245 | | LysR family transcriptional regulator | cofit | 31 | 96 |
| | Ralstonia solanacearum UW163 | UW163_RS00325 | | LysR family transcriptional regulator | insig. | 31 | 96 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS37580 | | LysR family transcriptional regulator | insig. | 30 | 95 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3156 | | transcriptional regulator, LysR family | insig. | 29 | 96 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3156 | | transcriptional regulator, LysR family | sig. | 29 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_03927 | | HTH-type transcriptional activator CmpR | insig. | 29 | 81 |
| | Synechococcus elongatus PCC 7942 | Synpcc7942_1980 | rbcR | transcriptional regulator, LysR family | no data | 31 | 81 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS11465 | | transcriptional regulator | no data | 28 | 84 |
| | Enterobacter sp. TBS_079 | MPMX20_03128 | | HTH-type transcriptional activator CmpR | sig. | 27 | 95 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS09325 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Ralstonia solanacearum GMI1000 | RS_RS04040 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_4086 | | Transcriptional regulator | strong | 29 | 94 |
| | Dickeya dianthicola ME23 | DZA65_RS09590 | | LysR family transcriptional regulator | insig. | 28 | 95 |
| | Dickeya dianthicola 67-19 | HGI48_RS09285 | | LysR family transcriptional regulator | insig. | 28 | 95 |
| | Klebsiella michiganensis M5al | BWI76_RS19690 | | LysR family transcriptional regulator | insig. | 28 | 95 |
| | Serratia liquefaciens MT49 | IAI46_17215 | | LysR family transcriptional regulator | insig. | 27 | 95 |
| | Ralstonia solanacearum GMI1000 | RS_RS01060 | | LysR family transcriptional regulator | insig. | 30 | 80 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS18655 | | LysR family transcriptional regulator | sig. | 27 | 99 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30475 | | LysR family transcriptional regulator | insig. | 29 | 81 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS10365 | | LysR family transcriptional regulator | insig. | 26 | 99 |
| | Agrobacterium fabrum C58 | Atu0873 | | transcriptional regulator, LysR family | insig. | 27 | 84 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25175 | | LysR family transcriptional regulator | insig. | 27 | 95 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS43485 | | LysR family transcriptional regulator | insig. | 27 | 95 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS31510 | | LysR family transcriptional regulator | insig. | 30 | 85 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_26645 | | DNA-binding transcriptional regulator YeiE | insig. | 28 | 95 |
| | Azospirillum sp. SherDot2 | MPMX19_04948 | | HTH-type transcriptional regulator GltR | insig. | 27 | 92 |
| | Erwinia tracheiphila SCR3 | LU632_RS17295 | | LysR family transcriptional regulator | insig. | 26 | 96 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS04820 | | LysR family transcriptional regulator | insig. | 30 | 83 |
| | Dechlorosoma suillum PS | Dsui_2257 | | transcriptional regulator | cofit | 30 | 87 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS19975 | | LysR family transcriptional regulator | insig. | 30 | 96 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26520 | | LysR family transcriptional regulator | insig. | 27 | 95 |
| | Lysobacter sp. OAE881 | ABIE51_RS00200 | | LysR family transcriptional regulator | cofit | 31 | 74 |
| | Acidovorax sp. GW101-3H11 | Ac3H11_3363 | | LysR-family transcriptional regulator PA4203 | insig. | 28 | 86 |
| | Pseudomonas putida KT2440 | PP_5348 | | Transcriptional regulator, LysR family | strong | 29 | 85 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS20480 | | LysR family transcriptional regulator | insig. | 30 | 84 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14705 | | LysR family transcriptional regulator | insig. | 27 | 95 |
| | Ralstonia solanacearum UW163 | UW163_RS12175 | | LysR family transcriptional regulator | insig. | 27 | 95 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_12015 | | LysR family transcriptional regulator | strong | 26 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS30655 | | LysR family transcriptional regulator | insig. | 28 | 81 |
| | Pseudomonas sp. DMC3 | GFF1421 | | HTH-type transcriptional regulator GltR | insig. | 27 | 97 |
| | Pseudomonas sp. RS175 | PFR28_04519 | | HTH-type transcriptional activator CmpR | strong | 26 | 95 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4277 | | LysR family transcriptional regulator PA5437 | strong | 26 | 95 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_02230 | lysR | LysR family transcriptional regulator | insig. | 32 | 81 |
| | Escherichia coli BL21 | ECD_02086 | | putative DNA-binding transcriptional regulator | insig. | 27 | 95 |
| | Escherichia coli ECOR38 | HEPCGN_22760 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 27 | 95 |
| | Escherichia coli ECRC100 | OKFHMN_23495 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 27 | 95 |
| | Escherichia coli ECRC101 | MCAODC_14545 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 27 | 95 |
| | Escherichia coli ECRC102 | NIAGMN_21260 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 27 | 95 |
| | Escherichia coli ECRC62 | BNILDI_13990 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 27 | 95 |
| | Escherichia coli ECRC98 | JDDGAC_27455 | yieE | DNA-binding transcriptional regulator YeiE | insig. | 27 | 95 |
| | Escherichia coli ECRC99 | KEDOAH_04690 | yieE | DNA-binding transcriptional regulator YeiE | no data | 27 | 95 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01554 | | HTH-type transcriptional regulator CysL | sig. | 27 | 95 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS12630 | | DNA-binding transcriptional regulator YeiE | insig. | 27 | 95 |
| | Escherichia coli BW25113 | b2157 | yeiE | predicted DNA-binding transcriptional regulator (NCBI) | insig. | 27 | 95 |
| | Pseudomonas orientalis W4I3 | QF045_RS02580 | | LysR family transcriptional regulator | strong | 27 | 95 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3777 | | LysR family transcriptional regulator YeiE | insig. | 26 | 96 |
| | Ralstonia solanacearum GMI1000 | RS_RS05515 | | LysR family transcriptional regulator | insig. | 26 | 98 |
| | Pseudomonas simiae WCS417 | PS417_28220 | | LysR family transcriptional regulator | strong | 26 | 95 |
| | Erwinia amylovora T8 | OLJFJH_11795 | | DNA-binding transcriptional regulator YeiE | insig. | 27 | 96 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_00112 | | HTH-type transcriptional activator CmpR | strong | 27 | 95 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.979.1 | | LysR family transcriptional regulator YeiE | insig. | 26 | 94 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 26 | 95 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS29885 | | LysR family transcriptional regulator | strong | 26 | 95 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS34110 | | LysR substrate-binding domain-containing protein | insig. | 29 | 89 |
| | Azospirillum sp. SherDot2 | MPMX19_02320 | | HTH-type transcriptional regulator GltR | insig. | 29 | 82 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS32870 | | LysR family transcriptional regulator | insig. | 28 | 89 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08845 | | LysR family transcriptional regulator | strong | 27 | 99 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_5062 | | transcriptional regulator, LysR family | strong | 29 | 95 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_5062 | | transcriptional regulator, LysR family | sig. | 29 | 95 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_10035 | | LysR family transcriptional regulator | strong | 26 | 95 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS19620 | | LysR family transcriptional regulator | insig. | 29 | 80 |
| | Xanthobacter sp. DMC5 | GFF502 | | HTH-type transcriptional regulator GltR | no data | 29 | 86 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.309.1 | | Chromosome initiation inhibitor | insig. | 28 | 92 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS04875 | | LysR family transcriptional regulator | insig. | 27 | 96 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1048.1 | | Transcriptional regulator lysR family | insig. | 26 | 96 |
| | Pseudomonas sp. S08-1 | OH686_10480 | | Transcriptional regulator, LysR family | insig. | 30 | 81 |