Homologs of GEMAOFIL_05407 from Pseudomonas lactucae CFBP13502

putative signaling protein
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05407 putative signaling protein cofit 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS28055 EAL domain-containing protein insig. 91 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS28055 EAL domain-containing protein sig. 91 100
o Pseudomonas simiae WCS417 PS417_26405 diguanylate cyclase insig. 88 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2405 Sensory box/GGDEF family protein insig. 77 97
o Pseudomonas fluorescens FW300-N2E3 AO353_07885 diguanylate cyclase strong 75 99
o Pseudomonas sp. DMC3 GFF149 Sensor histidine kinase RcsC cofit 75 99
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4666 Sensory box/GGDEF family protein insig. 73 99
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1071 Sensory box/GGDEF family protein insig. 73 99
o Pseudomonas fluorescens FW300-N2C3 AO356_13725 diguanylate cyclase insig. 74 99
o Pseudomonas sp. RS175 PFR28_04179 Sensor histidine kinase RcsC sig. 73 94
o Pseudomonas sp. SVBP6 COO64_RS17585 bifunctional diguanylate cyclase/phosphodiesterase insig. 70 98
o Pseudomonas putida KT2440 PP_4959 diguanylate cyclase cofit 68 97
o Pseudomonas syringae pv. syringae B728a Psyr_0509 PAS:GGDEF insig. 66 98
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0509 PAS:GGDEF insig. 66 98
o Pseudomonas sp. BP01 JOY50_RS09900 bifunctional diguanylate cyclase/phosphodiesterase insig. 68 98
o Pseudomonas sp. S08-1 OH686_06280 Sensory box/GGDEF family protein insig. 57 95
o Pseudomonas stutzeri RCH2 Psest_3216 diguanylate cyclase (GGDEF) domain strong 56 97
o Pseudomonas segetis P6 MPMX49_03687 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 50 94
  Dechlorosoma suillum PS Dsui_3334 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 98
  Marinobacter adhaerens HP15 HP15_806 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 33 97
  Dechlorosoma suillum PS Dsui_3449 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 96
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 81
  Pseudomonas syringae pv. syringae B728a Psyr_1098 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1098 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 34 97
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 39 78
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 36 77
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 35 81
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 39 68
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase cofit 37 77
  Pseudomonas sp. SVBP6 COO64_RS22585 EAL domain-containing protein insig. 36 78
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 76
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 36 79
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 36 76
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 36 76
  Pseudomonas aeruginosa PA14 IKLFDK_24035 GGDEF domain-containing protein cofit 34 79
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 36 78
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 36 78
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 36 76
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05297 Membrane-bound lytic murein transglycosylase F cofit 36 77
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 36 77
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 36 76
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 36 76
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 77
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 36 77
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 78
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 36 76
  Herbaspirillum seropedicae SmR1 HSERO_RS23840 hypothetical protein sig. 34 81
  Desulfovibrio vulgaris Miyazaki F DvMF_1544 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 33 98
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 36 77
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 37 76
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 76
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 35 76
  Azospirillum sp. SherDot2 MPMX19_06128 hypothetical protein insig. 36 80
  Pseudomonas aeruginosa PA14 IKLFDK_00505 cyclic di-GMP receptor MorA insig. 36 77
  Pseudomonas lactucae CFBP13502 GEMAOFIL_05007 hypothetical protein cofit 36 76
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 35 76
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 35 76
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 35 78
  Pseudomonas segetis P6 MPMX49_03978 hypothetical protein strong 35 77
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 35 76
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 35 77
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 36 76
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 37 78
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 36 76
  Pseudomonas sp. BP01 JOY50_RS18065 bifunctional diguanylate cyclase/phosphodiesterase insig. 35 78
  Acidovorax sp. GW101-3H11 Ac3H11_4486 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 82
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 36 76
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 36 77
  Magnetospirillum magneticum AMB-1 AMB_RS22740 GGDEF domain-containing protein insig. 36 77
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 76
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 36 76
  Dechlorosoma suillum PS Dsui_2419 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 37 78
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 77
  Desulfovibrio vulgaris Hildenborough JW710 DVU0408 response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) sig. 30 99
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 34 78
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 77
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 35 77
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 34 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS12250 diguanylate cyclase insig. 35 76
  Ralstonia solanacearum UW163 UW163_RS01355 diguanylate cyclase insig. 35 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04630 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 34 92
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 34 77
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 36 77
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 35 76
  Shewanella amazonensis SB2B Sama_0142 sensory box protein (RefSeq) sig. 33 81
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1728 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 61
  Ralstonia solanacearum PSI07 RPSI07_RS21070 PAS domain S-box protein insig. 35 76
  Cupriavidus basilensis FW507-4G11 RR42_RS09980 diguanylate phosphodiesterase insig. 39 61
  Pseudomonas syringae pv. syringae B728a Psyr_1159 PAS:GGDEF insig. 37 62
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1159 PAS:GGDEF insig. 37 62
  Burkholderia phytofirmans PsJN BPHYT_RS13030 diguanylate cyclase insig. 34 79
  Ralstonia solanacearum GMI1000 RS_RS02945 PAS domain S-box protein insig. 35 76
  Acidovorax sp. GW101-3H11 Ac3H11_4670 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 33 80
  Pseudomonas sp. S08-1 OH686_07355 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 78
  Pseudomonas fluorescens FW300-N2E3 AO353_23975 diguanylate cyclase strong 38 61
  Pseudomonas segetis P6 MPMX49_00863 hypothetical protein insig. 35 77
  Pseudomonas stutzeri RCH2 Psest_0263 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 35 81
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 35 76
  Dechlorosoma suillum PS Dsui_1531 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 34 76