Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Klebsiella michiganensis M5al | BWI76_RS00800 | | LysR family transcriptional regulator | insig. | 100 | 100 |
o | Pantoea sp. MT58 | IAI47_08365 | | LysR family transcriptional regulator | sig. | 35 | 85 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS17295 | | LysR family transcriptional regulator | insig. | 33 | 90 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1784 | | Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) | insig. | 33 | 87 |
o | Enterobacter sp. TBS_079 | MPMX20_00039 | | HTH-type transcriptional regulator BenM | insig. | 32 | 86 |
| Klebsiella michiganensis M5al | BWI76_RS13010 | | LysR family transcriptional regulator | sig. | 35 | 82 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08630 | | LysR family transcriptional regulator | insig. | 31 | 93 |
| Rahnella sp. WP5 | EX31_RS04240 | | LysR family transcriptional regulator | insig. | 34 | 84 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS12375 | | LysR family transcriptional regulator | sig. | 35 | 87 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS16205 | | LysR family transcriptional regulator | insig. | 32 | 88 |
| Escherichia coli ECOR38 | HEPCGN_21440 | | LysR family transcriptional regulator | insig. | 32 | 91 |
| Enterobacter asburiae PDN3 | EX28DRAFT_2404 | | Transcriptional regulator | insig. | 31 | 86 |
| Escherichia coli ECOR27 | NOLOHH_13930 | xapR | DNA-binding transcriptional regulator XapR | cofit | 30 | 92 |
| Escherichia coli BW25113 | b2405 | xapR | DNA-binding transcriptional activator (NCBI) | insig. | 30 | 92 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS03905 | | hypothetical protein | insig. | 34 | 86 |
| Escherichia fergusonii Becca | EFB2_01472 | | Hca operon transcriptional activator HcaR | insig. | 30 | 88 |
| Pantoea sp. MT58 | IAI47_21735 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| Escherichia coli Nissle 1917 | ECOLIN_RS13815 | | DNA-binding transcriptional regulator XapR | no data | 30 | 88 |
| Enterobacter sp. TBS_079 | MPMX20_01221 | | HTH-type transcriptional regulator BenM | insig. | 30 | 86 |
| Enterobacter sp. TBS_079 | MPMX20_03298 | | Hca operon transcriptional activator HcaR | insig. | 31 | 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2033 | | Xanthosine operon regulatory protein XapR, LysR family | insig. | 30 | 92 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS10455 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| Serratia liquefaciens MT49 | IAI46_11915 | | LysR family transcriptional regulator | cofit | 31 | 88 |
| Pseudomonas stutzeri RCH2 | Psest_3707 | | Transcriptional regulator | insig. | 32 | 86 |
| Klebsiella michiganensis M5al | BWI76_RS20595 | | LysR family transcriptional regulator | insig. | 30 | 88 |
| Pseudomonas putida KT2440 | PP_5071 | | putative DNA-binding transcriptional regulator | insig. | 32 | 86 |
| Variovorax sp. SCN45 | GFF286 | | Transcriptional regulator, LysR family | insig. | 30 | 92 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS17450 | | LysR family transcriptional regulator | insig. | 33 | 89 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01073 | | DNA-binding transcriptional regulator, LysR family | insig. | 28 | 94 |
| Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.1212.1 | | transcriptional regulator | insig. | 29 | 92 |
| Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS13490 | | LysR family transcriptional regulator | insig. | 28 | 81 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4886 | | LysR family transcriptional regulator STM3121 | insig. | 32 | 86 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS25180 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| Burkholderia phytofirmans PsJN | BPHYT_RS07845 | | LysR family transcriptional regulator | insig. | 29 | 94 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_07965 | | LysR family transcriptional regulator | insig. | 29 | 86 |
| Variovorax sp. SCN45 | GFF6416 | | hypothetical protein | insig. | 30 | 85 |
| Escherichia fergusonii Becca | EFB2_02397 | | Hca operon transcriptional activator HcaR | insig. | 31 | 83 |
| Escherichia coli Nissle 1917 | ECOLIN_RS08910 | | LysR family transcriptional regulator | no data | 31 | 83 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS12870 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_25375 | | LysR family transcriptional regulator | no data | 33 | 99 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01885 | | DNA-binding transcriptional regulator, LysR family | insig. | 31 | 86 |
| Enterobacter sp. TBS_079 | MPMX20_02334 | | HTH-type transcriptional regulator GltC | insig. | 30 | 89 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS15725 | | LysR family transcriptional regulator | insig. | 30 | 89 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF103 | | LysR family transcriptional regulator YnfL | insig. | 29 | 97 |
| Burkholderia phytofirmans PsJN | BPHYT_RS04820 | | LysR family transcriptional regulator | strong | 31 | 84 |
| Bosea sp. OAE506 | ABIE41_RS22670 | | LysR substrate-binding domain-containing protein | insig. | 31 | 87 |
| Paraburkholderia graminis OAS925 | ABIE53_001240 | | DNA-binding transcriptional LysR family regulator | insig. | 30 | 86 |
| Pectobacterium carotovorum WPP14 | HER17_RS18045 | | LysR family transcriptional regulator | cofit | 28 | 85 |
| Escherichia coli BL21 | ECD_01564 | | LysR family putative transcriptional regulator | no data | 30 | 83 |
| Escherichia coli ECOR27 | NOLOHH_18240 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | cofit | 30 | 83 |
| Escherichia coli ECOR38 | HEPCGN_06110 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 30 | 83 |
| Escherichia coli ECRC100 | OKFHMN_27735 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | cofit | 30 | 83 |
| Escherichia coli ECRC101 | MCAODC_17675 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 30 | 83 |
| Escherichia coli ECRC102 | NIAGMN_00340 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 30 | 83 |
| Escherichia coli ECRC62 | BNILDI_17030 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | cofit | 30 | 83 |
| Escherichia coli ECRC98 | JDDGAC_02325 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | insig. | 30 | 83 |
| Escherichia coli ECRC99 | KEDOAH_00370 | ynfL | Uncharacterized HTH-type transcriptional regulator YnfL | no data | 30 | 83 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02131 | | Hca operon transcriptional activator HcaR | insig. | 30 | 83 |
| Escherichia coli BW25113 | b1595 | ynfL | predicted DNA-binding transcriptional regulator (NCBI) | sig. | 30 | 83 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS05585 | | LysR substrate-binding domain-containing protein | sig. | 32 | 86 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS12500 | | LysR family transcriptional regulator | insig. | 31 | 87 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0767 | | transcriptional regulator, LysR family | insig. | 30 | 82 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0767 | | transcriptional regulator, LysR family | insig. | 30 | 82 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1900 | | LysR family transcriptional regulator STM3121 | no data | 29 | 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3076 | | LysR family transcriptional regulator STM3121 | insig. | 28 | 89 |
| Acinetobacter radioresistens SK82 | MPMX26_01690 | | HTH-type transcriptional regulator BenM | cofit | 27 | 93 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_07285 | lysR | LysR family transcriptional regulator | cofit | 32 | 86 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3313 | | transcriptional regulator, LysR family (TIGR) | insig. | 30 | 86 |
| Serratia liquefaciens MT49 | IAI46_11680 | | LysR family transcriptional regulator | insig. | 30 | 87 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23395 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| Dickeya dianthicola 67-19 | HGI48_RS10670 | | LysR family transcriptional regulator | insig. | 29 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS32760 | | LysR family transcriptional regulator | insig. | 29 | 91 |
| Serratia liquefaciens MT49 | IAI46_21855 | | LysR family transcriptional regulator | insig. | 33 | 87 |
| Rahnella sp. WP5 | EX31_RS16990 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| Ralstonia solanacearum PSI07 | RPSI07_RS16750 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS38685 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_00128 | | transcriptional regulator, LysR family | insig. | 30 | 86 |
| Escherichia fergusonii Becca | EFB2_04525 | | Hydrogen peroxide-inducible genes activator | insig. | 32 | 80 |
| Escherichia coli Nissle 1917 | ECOLIN_RS23525 | | LysR family transcriptional regulator | insig. | 32 | 80 |
| Dickeya dianthicola ME23 | DZA65_RS11140 | | LysR family transcriptional regulator | insig. | 31 | 87 |
| Pseudomonas sp. RS175 | PFR28_05019 | | HTH-type transcriptional regulator BenM | insig. | 31 | 93 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS12290 | | LysR family transcriptional regulator | insig. | 29 | 93 |
| Rhodanobacter denitrificans MT42 | LRK55_RS17870 | | LysR family transcriptional regulator | strong | 32 | 86 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS18015 | | LysR family transcriptional regulator | strong | 32 | 86 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_12600 | | LysR family transcriptional regulator | insig. | 32 | 86 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS00760 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Ralstonia solanacearum UW163 | UW163_RS14095 | | LysR family transcriptional regulator | insig. | 30 | 93 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS23510 | | LysR family transcriptional regulator | insig. | 29 | 89 |
| Dickeya dadantii 3937 | DDA3937_RS10670 | | LysR family transcriptional regulator | insig. | 29 | 87 |
| Burkholderia phytofirmans PsJN | BPHYT_RS30315 | | LysR family transcriptional regulator | insig. | 30 | 85 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS05535 | | LysR family transcriptional regulator | sig. | 32 | 88 |
| Ralstonia solanacearum PSI07 | RPSI07_RS03410 | | LysR family transcriptional regulator | insig. | 31 | 86 |
| Enterobacter sp. TBS_079 | MPMX20_00286 | | Hydrogen peroxide-inducible genes activator | insig. | 31 | 80 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1150 | | Transcriptional regulator | cofit | 30 | 86 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0421 | | transcriptional regulator, LysR family | insig. | 31 | 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0421 | | transcriptional regulator, LysR family | insig. | 31 | 86 |
| Burkholderia phytofirmans PsJN | BPHYT_RS10210 | | LysR family transcriptional regulator | no data | 30 | 90 |
| Pectobacterium carotovorum WPP14 | HER17_RS10740 | | LysR family transcriptional regulator | insig. | 30 | 87 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF4112 | | Transcriptional regulator | insig. | 32 | 86 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_22550 | | LysR family transcriptional regulator | insig. | 30 | 86 |