| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Agrobacterium fabrum C58 | Atu4521 | | AraC family transcriptional regulator | insig. | 100 | 100 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03691 | | transcriptional regulator, AraC family | insig. | 43 | 99 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004566 | | AraC family transcriptional regulator | insig. | 43 | 100 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS16105 | | AraC family transcriptional regulator | insig. | 44 | 97 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS35425 | | AraC family transcriptional regulator | insig. | 42 | 99 |
| o | Sinorhizobium meliloti 1021 | SMc03170 | | transcriptional regulator | insig. | 39 | 99 |
| o | Pseudomonas sp. S08-1 | OH686_16830 | | Transcriptional regulator, AraC family | insig. | 39 | 99 |
| | Pseudomonas sp. DMC3 | GFF5263 | | hypothetical protein | insig. | 35 | 58 |
| | Pseudomonas sp. SVBP6 | COO64_RS22060 | | GyrI-like domain-containing protein | insig. | 37 | 54 |
| | Pseudomonas sp. RS175 | PFR28_00598 | | hypothetical protein | strong | 39 | 53 |
| o | Bifidobacterium breve UCC2003 | BBR_RS14655 | | AraC family transcriptional regulator | strong | 30 | 99 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_03225 | | transcriptional regulator | insig. | 36 | 54 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_553 | | Bacterial transcription activator, effector binding protein | insig. | 36 | 57 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_05040 | | transcriptional regulator | sig. | 36 | 53 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2859 | | Bacterial transcription activator, effector binding protein | insig. | 36 | 53 |
| | Pseudomonas orientalis W4I3 | QF045_RS24075 | | GyrI-like domain-containing protein | insig. | 37 | 53 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04532 | | hypothetical protein | cofit | 36 | 53 |
| | Pseudomonas simiae WCS417 | PS417_21970 | | AraC family transcriptional regulator | no data | 36 | 53 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1930 | | Bacterial transcription activator, effector binding protein | insig. | 32 | 55 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS23575 | | AraC family transcriptional regulator | insig. | 36 | 53 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS23575 | | AraC family transcriptional regulator | insig. | 36 | 53 |
| o | Pantoea sp. MT58 | IAI47_16240 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 28 | 91 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS21865 | | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 29 | 91 |
| o | Dickeya dadantii 3937 | DDA3937_RS18435 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 98 |
| o | Erwinia amylovora T8 | OLJFJH_01510 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 28 | 91 |
| o | Dickeya dianthicola 67-19 | HGI48_RS18365 | | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 27 | 91 |
| o | Dickeya dianthicola ME23 | DZA65_RS19505 | | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 27 | 91 |
| o | Rahnella sp. WP5 | EX31_RS03965 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 91 |
| o | Serratia liquefaciens MT49 | IAI46_03005 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 91 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS10170 | brlR;inference=COORDINATES | c-di-GMP-binding multidrug transporter transcriptional regulator BrlR | sig. | 37 | 50 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_29160 | | c-di-GMP-binding multidrug transporter transcriptional regulator BrlR | cofit | 37 | 50 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS51885 | brlR;inference=COORDINATES | c-di-GMP-binding multidrug transporter transcriptional regulator BrlR | insig. | 37 | 50 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1064 | | Right origin-binding protein | insig. | 26 | 98 |
| o | Escherichia coli BL21 | ECD_04272 | | right oriC-binding transcriptional activator, AraC family | insig. | 27 | 91 |
| o | Escherichia coli ECOR27 | NOLOHH_03480 | robA | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 27 | 91 |
| o | Escherichia coli ECOR38 | HEPCGN_09155 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 91 |
| o | Escherichia coli ECRC100 | OKFHMN_11150 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 91 |
| o | Escherichia coli ECRC101 | MCAODC_01665 | robA | MDR efflux pump AcrAB transcriptional activator RobA | strong | 27 | 91 |
| o | Escherichia coli ECRC102 | NIAGMN_09000 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 91 |
| o | Escherichia coli ECRC62 | BNILDI_08120 | robA | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 27 | 91 |
| o | Escherichia coli ECRC98 | JDDGAC_14745 | robA | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 91 |
| o | Escherichia coli ECRC99 | KEDOAH_17005 | robA | MDR efflux pump AcrAB transcriptional activator RobA | no data | 27 | 91 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03665 | | Right origin-binding protein | insig. | 27 | 91 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS25230 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 27 | 91 |
| o | Escherichia coli BW25113 | b4396 | rob | DNA-binding transcriptional activator (NCBI) | strong | 27 | 91 |
| o | Escherichia fergusonii Becca | EFB2_04048 | | Right origin-binding protein | insig. | 27 | 91 |
| o | Erwinia tracheiphila HP pepo 2.2 | IJEDHG_06315 | robA | MDR efflux pump AcrAB transcriptional activator RobA | cofit | 26 | 91 |
| o | Erwinia tracheiphila SCR3 | LU632_RS02595 | robA | MDR efflux pump AcrAB transcriptional activator RobA | sig. | 26 | 91 |
| | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS09690 | | helix-turn-helix domain-containing protein | cofit | 37 | 39 |
| | Pantoea sp. MT58 | IAI47_17600 | | helix-turn-helix domain-containing protein | insig. | 37 | 39 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_3606 | | AraC-type DNA-binding domain-containing proteins | insig. | 26 | 98 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS02770 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 26 | 91 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_12470 | | MDR efflux pump AcrAB transcriptional activator RobA | insig. | 25 | 91 |
| | Serratia liquefaciens MT49 | IAI46_21365 | | helix-turn-helix domain-containing protein | insig. | 25 | 92 |
| | Rahnella sp. WP5 | EX31_RS01820 | | helix-turn-helix domain-containing protein | insig. | 26 | 98 |
| o | Enterobacter sp. TBS_079 | MPMX20_00703 | | Right origin-binding protein | sig. | 26 | 91 |
| o | Variovorax sp. SCN45 | GFF3429 | | Transcriptional regulator, AraC family | insig. | 27 | 98 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_83 | | transcriptional regulator, AraC family | insig. | 28 | 98 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3136 | | Uncharacterized protein ygiV | insig. | 25 | 89 |
| | Serratia liquefaciens MT49 | IAI46_18640 | | helix-turn-helix domain-containing protein | insig. | 34 | 41 |
| o | Klebsiella michiganensis M5al | BWI76_RS04205 | | right oriC-binding transcriptional activator | sig. | 26 | 91 |
| | Pseudomonas sp. RS175 | PFR28_02003 | | HTH-type transcriptional activator RhaR | insig. | 28 | 98 |
| | Pseudomonas sp. SVBP6 | COO64_RS14840 | | GyrI-like domain-containing protein | insig. | 27 | 99 |
| o | Rhodopseudomonas palustris CGA009 | TX73_004525 | | AraC family transcriptional regulator | insig. | 24 | 91 |
| | Caulobacter crescentus NA1000 | CCNA_02611 | | AraC-family transcriptional regulator | insig. | 26 | 90 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_02611 | | AraC-family transcriptional regulator | cofit | 26 | 90 |
| | Pseudomonas simiae WCS417 | PS417_01425 | | AraC family transcriptional regulator | insig. | 27 | 98 |
| | Pectobacterium carotovorum WPP14 | HER17_RS07425 | | helix-turn-helix domain-containing protein | insig. | 34 | 37 |
| | Escherichia fergusonii Becca | EFB2_02430 | | Multiple antibiotic resistance protein MarA | insig. | 32 | 42 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS08735 | | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 32 | 42 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03043 | | transcriptional regulator, effector binding domain protein | insig. | 25 | 99 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS00095 | | AraC family transcriptional regulator | insig. | 24 | 91 |
| o | Azospirillum sp. SherDot2 | MPMX19_02438 | | DNA gyrase inhibitor | insig. | 24 | 91 |
| | Shewanella amazonensis SB2B | Sama_0076 | | transcription activator, effector binding (RefSeq) | insig. | 23 | 92 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_21500 | | multiple antibiotic resistance transcriptional regulator MarR | insig. | 36 | 35 |
| | Escherichia coli BL21 | ECD_01490 | | multiple antibiotic resistance transcriptional regulator | no data | 32 | 41 |
| | Escherichia coli ECOR27 | NOLOHH_18720 | marA | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 32 | 41 |
| | Escherichia coli ECOR38 | HEPCGN_26845 | marA | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 32 | 41 |
| | Escherichia coli ECRC100 | OKFHMN_01075 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 32 | 41 |
| | Escherichia coli ECRC101 | MCAODC_16850 | marA | MDR efflux pump AcrAB transcriptional activator MarA | insig. | 32 | 41 |
| | Escherichia coli ECRC102 | NIAGMN_25220 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 32 | 41 |
| | Escherichia coli ECRC62 | BNILDI_17210 | marA | MDR efflux pump AcrAB transcriptional activator MarA | cofit | 32 | 41 |
| | Escherichia coli ECRC98 | JDDGAC_03585 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 32 | 41 |
| | Escherichia coli ECRC99 | KEDOAH_27355 | marA | MDR efflux pump AcrAB transcriptional activator MarA | no data | 32 | 41 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02188 | | Multiple antibiotic resistance protein MarA | insig. | 32 | 41 |
| | Escherichia coli BW25113 | b1531 | marA | multiple antibiotic resistance; transcriptional activator of defense systems (VIMSS) | strong | 32 | 41 |
| o | Shewanella loihica PV-4 | Shew_0371 | | AraC family transcriptional regulator (RefSeq) | insig. | 27 | 92 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02865 | | HTH-type transcriptional activator RhaR | insig. | 25 | 98 |
| | Methylophilus sp. DMC18 | GFF890 | | HTH-type transcriptional activator RhaR | insig. | 26 | 89 |
| | Pseudomonas sp. SVBP6 | COO64_RS23290 | | GyrI-like domain-containing protein | insig. | 26 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_01363 | | HTH-type transcriptional activator RhaS | insig. | 25 | 91 |
| | Klebsiella michiganensis M5al | BWI76_RS15295 | | MDR efflux pump AcrAB transcriptional activator MarA | strong | 36 | 35 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_1206 | | Helix-turn-helix domain | insig. | 34 | 40 |
| | Enterobacter sp. TBS_079 | MPMX20_02259 | | Multiple antibiotic resistance protein MarA | insig. | 34 | 40 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2506 | | Multiple antibiotic resistance protein MarA | insig. | 33 | 41 |
| | Serratia liquefaciens MT49 | IAI46_14910 | | helix-turn-helix domain-containing protein | insig. | 36 | 39 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS10040 | | AraC family transcriptional regulator | insig. | 27 | 94 |
| | Ralstonia solanacearum UW163 | UW163_RS03540 | | AraC family transcriptional regulator | insig. | 27 | 94 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS22525 | | AraC family transcriptional regulator | insig. | 26 | 99 |
| | Rahnella sp. WP5 | EX31_RS19240 | | helix-turn-helix domain-containing protein | no data | 35 | 39 |