Homologs of Shewana3_3048 from Shewanella sp. ANA-3

putative radical SAM protein (RefSeq)
SEED: COG1242: Predicted Fe-S oxidoreductase

68 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_3048 putative radical SAM protein (RefSeq) insig. 100 100
o Shewanella oneidensis MR-1 SO1326 conserved hypothetical protein (NCBI ptt file) insig. 94 100
o Shewanella loihica PV-4 Shew_1033 putative radical SAM protein (RefSeq) insig. 71 99
o Pectobacterium carotovorum WPP14 HER17_RS19905 TIGR01212 family radical SAM protein cofit 59 100
o Serratia liquefaciens MT49 IAI46_22340 TIGR01212 family radical SAM protein insig. 59 99
o Dickeya dadantii 3937 DDA3937_RS01670 TIGR01212 family radical SAM protein insig. 57 100
o Dickeya dianthicola 67-19 HGI48_RS01565 TIGR01212 family radical SAM protein insig. 57 100
o Dickeya dianthicola ME23 DZA65_RS01640 TIGR01212 family radical SAM protein insig. 57 100
o Shewanella amazonensis SB2B Sama_0858 hypothetical protein (RefSeq) insig. 59 99
o Escherichia coli Nissle 1917 ECOLIN_RS18470 TIGR01212 family radical SAM protein insig. 57 100
o Escherichia coli BL21 ECD_03076 putative Fe-S oxidoreductase, Radical SAM superfamily protein insig. 57 100
o Escherichia coli ECOR27 NOLOHH_09690 yhcC TIGR01212 family radical SAM protein insig. 57 100
o Escherichia coli ECRC100 OKFHMN_17890 yhcC TIGR01212 family radical SAM protein cofit 57 100
o Escherichia coli ECRC101 MCAODC_08410 yhcC TIGR01212 family radical SAM protein insig. 57 100
o Escherichia coli ECRC102 NIAGMN_15650 yhcC TIGR01212 family radical SAM protein insig. 57 100
o Escherichia coli ECRC62 BNILDI_01845 yhcC TIGR01212 family radical SAM protein insig. 57 100
o Escherichia coli ECRC98 JDDGAC_21515 yhcC TIGR01212 family radical SAM protein insig. 57 100
o Escherichia coli ECRC99 KEDOAH_10260 yhcC TIGR01212 family radical SAM protein no data 57 100
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00489 hypothetical protein insig. 57 100
o Escherichia coli BW25113 b3211 yhcC predicted Fe-S oxidoreductase (NCBI) insig. 57 100
o Escherichia fergusonii Becca EFB2_00612 hypothetical protein insig. 57 100
o Enterobacter asburiae PDN3 EX28DRAFT_3274 radical SAM protein, TIGR01212 family insig. 56 100
o Escherichia coli ECOR38 HEPCGN_16765 yhcC TIGR01212 family radical SAM protein insig. 57 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_12015 TIGR01212 family radical SAM protein insig. 56 100
o Klebsiella michiganensis M5al BWI76_RS25305 TIGR01212 family radical SAM protein insig. 57 100
o Enterobacter sp. TBS_079 MPMX20_04125 hypothetical protein insig. 56 100
o Klebsiella pneumoniae MKP103 KDGMDA_06140 TIGR01212 family radical SAM protein insig. 59 94
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF2955 COG1242: Predicted Fe-S oxidoreductase insig. 56 100
o Parabacteroides merdae CL09T00C40 HMPREF1078_RS16795 TIGR01212 family radical SAM protein insig. 37 97
  Desulfovibrio vulgaris Miyazaki F DvMF_2819 conserved hypothetical radical SAM protein (RefSeq) insig. 42 92
o Bacteroides stercoris CC31F HMPREF1181_RS08775 TIGR01212 family radical SAM protein insig. 37 92
o Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS14495 TIGR01212 family radical SAM protein sig. 37 91
o Phocaeicola dorei CL03T12C01 ABI39_RS10115 TIGR01212 family radical SAM protein insig. 38 91
o Fusobacterium nucleatum SB010 HUW76_06060 TIGR01212 family radical SAM protein cofit 35 98
o Desulfovibrio vulgaris Hildenborough JW710 DVU0790 radical SAM protein, TIGR01212 family (TIGR) insig. 39 95
o Bacteroides ovatus ATCC 8483 BACOVA_04934 radical SAM protein, TIGR01212 family insig. 37 91
o Bacteroides thetaiotaomicron VPI-5482 BT4125 conserved hypothetical protein (NCBI ptt file) sig. 36 97
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS14980 TIGR01212 family radical SAM protein insig. 38 91
o Methanococcus maripaludis S2 MMP_RS07685 TIGR01212 family radical SAM protein strong 33 98
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS04765 TIGR01212 family radical SAM protein insig. 37 97
o Methanococcus maripaludis JJ MMJJ_RS06675 TIGR01212 family radical SAM protein strong 32 98
  Fusobacterium nucleatum SB010 HUW76_02255 radical SAM protein cofit 26 71
  Methanococcus maripaludis JJ MMJJ_RS06255 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 strong 31 42
  Methanococcus maripaludis S2 MMP_RS08110 tRNA uridine(34) 5-carboxymethylaminomethyl modification radical SAM/GNAT enzyme Elp3 no data 29 44
  Desulfovibrio vulgaris Hildenborough JW710 DVU0394 radical SAM domain protein (TIGR) no data 28 71
  Desulfovibrio vulgaris Miyazaki F DvMF_1562 Radical SAM domain protein (RefSeq) no data 31 37
  Bacteroides stercoris CC31F HMPREF1181_RS06440 radical SAM family heme chaperone HemW cofit 29 36
  Rhodospirillum rubrum S1H Rru_A3770 tRNA-i(6)A37 modification enzyme MiaB (NCBI) strong 33 24
  Methanococcus maripaludis JJ MMJJ_RS07390 TIGR04014 family B12-binding domain/radical SAM domain-containing protein sig. 23 53
  Desulfovibrio vulgaris Miyazaki F DvMF_1330 RNA modification enzyme, MiaB family (RefSeq) strong 38 21
  Fusobacterium nucleatum SB010 HUW76_07655 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB strong 27 36
  Methanococcus maripaludis S2 MMP_RS06965 TIGR04014 family B12-binding domain/radical SAM domain-containing protein strong 20 57
  Agrobacterium fabrum C58 Atu0325 oxygen-independent coproporphyrinogen III oxidase no data 32 33
  Rhodopseudomonas palustris CGA009 TX73_002325 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB insig. 33 30
  Mycobacterium tuberculosis H37Rv Rv2733c Conserved hypothetical alanine, arginine-rich protein sig. 34 26
  Phaeobacter inhibens DSM 17395 PGA1_c35050 oxygen-independent coproporphyrinogen III oxidase HemN insig. 27 37
  Rhizobium sp. OAE497 ABIE40_RS01625 radical SAM family heme chaperone HemW no data 30 36
  Magnetospirillum magneticum AMB-1 AMB_RS22585 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase insig. 34 20
  Fusobacterium nucleatum SB010 HUW76_07285 radical SAM family heme chaperone HemW cofit 22 57
  Sinorhizobium meliloti 1021 SMc01147 coproporphyrinogen III oxidase strong 29 36
  Kangiella aquimarina DSM 16071 B158DRAFT_2271 MiaB-like tRNA modifying enzyme cofit 28 30
  Erwinia tracheiphila SCR3 LU632_RS18435 hutW heme anaerobic degradation radical SAM methyltransferase ChuW/HutW insig. 24 66
  Desulfovibrio vulgaris Hildenborough JW710 DVU0984 miaB tRNA-i(6)A37 modification enzyme MiaB (TIGR) sig. 37 21
  Rhodopseudomonas palustris CGA009 TX73_010940 heme anaerobic degradation radical SAM methyltransferase ChuW/HutW insig. 38 18
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_08260 hemN oxygen-independent coproporphyrinogen III oxidase cofit 35 28
  Erwinia tracheiphila SCR3 LU632_RS22115 hemN oxygen-independent coproporphyrinogen III oxidase insig. 35 28
  Bacteroides thetaiotaomicron VPI-5482 BT2168 coproporphyrinogen III oxidase (NCBI ptt file) sig. 26 36
  Bifidobacterium breve UCC2003 BBR_RS15235 coproporphyrinogen III oxidase insig. 25 52