Homologs of Shewana3_2061 from Shewanella sp. ANA-3

putative DNA-binding transcriptional regulator (RefSeq)
SEED: LysR-family transcriptional regulator YdhB

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_2061 putative DNA-binding transcriptional regulator (RefSeq) sig. 100 100
o Shewanella oneidensis MR-1 SO2374 transcriptional regulator, LysR family (NCBI ptt file) insig. 97 99
o Shewanella amazonensis SB2B Sama_1783 putative DNA-binding transcriptional regulator (RefSeq) sig. 84 99
o Shewanella loihica PV-4 Shew_2013 putative DNA-binding transcriptional regulator (RefSeq) cofit 81 99
o Serratia liquefaciens MT49 IAI46_11235 LysR family transcriptional regulator insig. 56 99
o Rahnella sp. WP5 EX31_RS13835 LysR family transcriptional regulator insig. 57 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3617 LysR-family transcriptional regulator YdhB insig. 55 99
o Enterobacter asburiae PDN3 EX28DRAFT_1656 Transcriptional regulator insig. 55 99
o Escherichia fergusonii Becca EFB2_02333 putative HTH-type transcriptional regulator YahB insig. 55 99
o Escherichia coli Nissle 1917 ECOLIN_RS09250 DNA-binding transcriptional activator PunR insig. 55 99
o Escherichia coli BL21 ECD_01630 LysR family putative transcriptional regulator insig. 55 99
o Escherichia coli ECOR38 HEPCGN_05765 punR DNA-binding transcriptional activator PunR sig. 55 99
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02065 putative HTH-type transcriptional regulator YahB insig. 55 99
o Escherichia coli ECOR27 NOLOHH_17900 punR DNA-binding transcriptional activator PunR insig. 55 99
o Escherichia coli ECRC100 OKFHMN_27380 punR DNA-binding transcriptional activator PunR cofit 55 99
o Escherichia coli ECRC101 MCAODC_18030 punR DNA-binding transcriptional activator PunR insig. 55 99
o Escherichia coli ECRC102 NIAGMN_00685 punR DNA-binding transcriptional activator PunR cofit 55 99
o Escherichia coli ECRC62 BNILDI_16690 punR DNA-binding transcriptional activator PunR cofit 55 99
o Escherichia coli ECRC98 JDDGAC_01970 punR DNA-binding transcriptional activator PunR insig. 55 99
o Escherichia coli ECRC99 KEDOAH_00730 punR DNA-binding transcriptional activator PunR no data 55 99
o Escherichia coli BW25113 b1659 ydhB predicted DNA-binding transcriptional regulator (NCBI) sig. 55 99
o Enterobacter sp. TBS_079 MPMX20_01977 putative HTH-type transcriptional regulator YahB strong 54 99
o Klebsiella pneumoniae MKP103 KDGMDA_23475 DNA-binding transcriptional activator PunR insig. 55 99
o Klebsiella michiganensis M5al BWI76_RS16515 LysR family transcriptional regulator insig. 55 99
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17790 LysR family transcriptional regulator cofit 54 99
o Pseudomonas fluorescens SBW25 PFLU_RS08000 LysR family transcriptional regulator insig. 54 99
o Pseudomonas fluorescens SBW25-INTG PFLU_RS08000 LysR family transcriptional regulator insig. 54 99
o Pseudomonas lactucae CFBP13502 GEMAOFIL_01742 putative HTH-type transcriptional regulator YahB cofit 53 99
o Pantoea sp. MT58 IAI47_10800 LysR family transcriptional regulator sig. 54 99
o Pseudomonas simiae WCS417 PS417_08030 transcriptional regulator strong 53 99
o Pseudomonas orientalis W4I3 QF045_RS10750 DNA-binding transcriptional activator PunR insig. 53 99
o Erwinia amylovora T8 OLJFJH_14515 DNA-binding transcriptional activator PunR insig. 55 99
o Erwinia tracheiphila SCR3 LU632_RS11185 LysR family transcriptional regulator insig. 53 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_25170 punR DNA-binding transcriptional activator PunR insig. 53 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_13980 LysR family transcriptional regulator cofit 51 99
  Escherichia fergusonii Becca EFB2_04800 putative HTH-type transcriptional regulator YahB insig. 39 98
  Escherichia coli BL21 ECD_03709 hypothetical protein insig. 39 95
  Escherichia coli Nissle 1917 ECOLIN_RS22025 LysR substrate-binding domain-containing protein insig. 39 95
  Dechlorosoma suillum PS Dsui_1258 transcriptional regulator insig. 38 96
  Methylophilus sp. DMC18 GFF933 HTH-type transcriptional regulator YhaJ insig. 36 95
  Ralstonia solanacearum PSI07 RPSI07_RS13590 LysR family transcriptional regulator insig. 37 95
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS03640 LysR family transcriptional regulator cofit 37 95
  Ralstonia solanacearum UW163 UW163_RS10030 LysR family transcriptional regulator insig. 37 95
  Ralstonia sp. UNC404CL21Col ABZR87_RS15530 LysR substrate-binding domain-containing protein insig. 37 95
  Ralstonia solanacearum GMI1000 RS_RS11085 LysR family transcriptional regulator insig. 37 95
  Shewanella oneidensis MR-1 SO3318 transcriptional regulator, LysR family (NCBI ptt file) sig. 34 100
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS14560 LysR substrate-binding domain-containing protein insig. 38 93
  Enterobacter asburiae PDN3 EX28DRAFT_2750 Transcriptional regulator insig. 33 96
  Enterobacter sp. TBS_079 MPMX20_03545 putative HTH-type transcriptional regulator YahB insig. 33 96
  Shewanella sp. ANA-3 Shewana3_1223 LysR family transcriptional regulator (RefSeq) insig. 34 97
  Escherichia coli BL21 ECD_00272 putative DNA-bindng transcriptional regulator insig. 32 99
  Escherichia fergusonii Becca EFB2_03719 putative HTH-type transcriptional regulator YahB insig. 32 99
  Escherichia coli ECOR27 NOLOHH_01870 yahB Uncharacterized HTH-type transcriptional regulator YahB insig. 32 99
  Escherichia coli ECOR38 HEPCGN_07585 lysR LysR family transcriptional regulator insig. 32 99
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03358 putative HTH-type transcriptional regulator YahB insig. 32 99
  Escherichia coli Nissle 1917 ECOLIN_RS02080 LysR substrate-binding domain-containing protein insig. 32 99
  Escherichia coli BW25113 b0316 yahB predicted DNA-bindng transcriptional regulator (NCBI) insig. 32 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS37445 LysR family transcriptional regulator insig. 36 96
  Cupriavidus basilensis FW507-4G11 RR42_RS14800 LysR family transcriptional regulator strong 35 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02483 transcriptional regulator, LysR family insig. 34 99
  Rahnella sp. WP5 EX31_RS04605 HTH-type transcriptional activator AllS insig. 31 99
  Cupriavidus basilensis FW507-4G11 RR42_RS03595 LysR family transcriptional regulator insig. 35 94
  Marinobacter adhaerens HP15 HP15_502 transcriptional regulator, LysR family protein insig. 34 96
  Rahnella sp. WP5 EX31_RS05190 LysR family transcriptional regulator insig. 34 97
  Escherichia coli BL21 ECD_00454 allD operon transcriptional activator insig. 34 90
  Escherichia coli ECOR27 NOLOHH_00920 allS HTH-type transcriptional activator AllS insig. 34 90
  Escherichia coli ECOR38 HEPCGN_06575 allS HTH-type transcriptional activator AllS insig. 34 90
  Escherichia coli ECRC100 OKFHMN_07940 allS HTH-type transcriptional activator AllS cofit 34 90
  Escherichia coli ECRC101 MCAODC_27155 allS HTH-type transcriptional activator AllS insig. 34 90
  Escherichia coli ECRC102 NIAGMN_05990 allS HTH-type transcriptional activator AllS insig. 34 90
  Escherichia coli ECRC62 BNILDI_22350 allS HTH-type transcriptional activator AllS insig. 34 90
  Escherichia coli ECRC98 JDDGAC_11585 allS HTH-type transcriptional activator AllS insig. 34 90
  Escherichia coli ECRC99 KEDOAH_20030 allS HTH-type transcriptional activator AllS no data 34 90
  Escherichia coli BW25113 b0504 ybbS DNA-binding transcriptional activator of the allD operon (NCBI) insig. 34 90
  Variovorax sp. SCN45 GFF4501 Transcriptional regulator, LysR family insig. 39 93
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03176 HTH-type transcriptional activator AllS insig. 34 90
  Burkholderia phytofirmans PsJN BPHYT_RS07085 LysR family transcriptional regulator insig. 34 95
  Escherichia fergusonii Becca EFB2_03557 HTH-type transcriptional activator AllS insig. 34 90
  Escherichia coli Nissle 1917 ECOLIN_RS02940 HTH-type transcriptional activator AllS insig. 34 90
  Klebsiella michiganensis M5al BWI76_RS06975 DNA-binding transcriptional activator AllS sig. 34 93
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4420 DNA-binding transcriptional activator of the allD operon insig. 34 90
  Herbaspirillum seropedicae SmR1 HSERO_RS17845 LysR family transcriptional regulator insig. 33 95
  Paraburkholderia graminis OAS925 ABIE53_002240 DNA-binding transcriptional LysR family regulator sig. 35 96
  Burkholderia phytofirmans PsJN BPHYT_RS30350 LysR family transcriptional regulator strong 36 95
  Shewanella amazonensis SB2B Sama_1388 LysR family transcriptional regulator (RefSeq) insig. 32 97
  Ralstonia sp. UNC404CL21Col ABZR87_RS17620 LysR family transcriptional regulator insig. 33 95
  Paraburkholderia graminis OAS925 ABIE53_006117 DNA-binding transcriptional LysR family regulator insig. 31 99
  Paraburkholderia sabiae LMG 24235 QEN71_RS16275 LysR family transcriptional regulator insig. 33 95
  Variovorax sp. OAS795 ABID97_RS29065 LysR family transcriptional regulator no data 37 96
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5181 LysR-family transcriptional regulator insig. 36 95
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01092 transcriptional regulator, LysR family insig. 34 97
  Variovorax sp. OAS795 ABID97_RS18015 LysR family transcriptional regulator insig. 36 93
  Escherichia coli BL21 ECD_01918 LysR family putative transcriptional regulator insig. 31 91
  Escherichia coli ECOR38 HEPCGN_03240 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 31 91
  Escherichia coli ECRC100 OKFHMN_24535 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 31 91
  Escherichia coli ECRC101 MCAODC_20405 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 31 91
  Escherichia coli ECRC102 NIAGMN_22480 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 31 91
  Escherichia coli ECRC98 JDDGAC_28645 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 31 91
  Escherichia coli ECRC99 KEDOAH_03615 yeeY Uncharacterized HTH-type transcriptional regulator YeeY no data 31 91
  Escherichia coli Nissle 1917 ECOLIN_RS11920 LysR substrate-binding domain-containing protein no data 31 91