Homologs of Shewana3_1223 from Shewanella sp. ANA-3

LysR family transcriptional regulator (RefSeq)
SEED: Transcriptional regulator, LysR family

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella sp. ANA-3 Shewana3_1223 LysR family transcriptional regulator (RefSeq) insig. 100 100
o Shewanella oneidensis MR-1 SO3318 transcriptional regulator, LysR family (NCBI ptt file) sig. 94 93
o Shewanella amazonensis SB2B Sama_1388 LysR family transcriptional regulator (RefSeq) insig. 58 92
o Dechlorosoma suillum PS Dsui_1258 transcriptional regulator insig. 46 88
o Methylophilus sp. DMC18 GFF933 HTH-type transcriptional regulator YhaJ insig. 47 88
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS14560 LysR substrate-binding domain-containing protein insig. 43 89
o Serratia liquefaciens MT49 IAI46_07350 LysR family transcriptional regulator insig. 42 90
o Paraburkholderia graminis OAS925 ABIE53_002240 DNA-binding transcriptional LysR family regulator sig. 43 91
o Marinobacter adhaerens HP15 HP15_502 transcriptional regulator, LysR family protein insig. 43 93
o Escherichia coli ECOR38 HEPCGN_03240 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 41 89
o Escherichia coli BL21 ECD_01918 LysR family putative transcriptional regulator insig. 41 89
o Variovorax sp. SCN45 GFF4501 Transcriptional regulator, LysR family insig. 43 89
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3097.1 Transcriptional regulator insig. 43 89
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01092 transcriptional regulator, LysR family insig. 41 91
o Ralstonia solanacearum GMI1000 RS_RS11085 LysR family transcriptional regulator insig. 43 89
o Paraburkholderia sabiae LMG 24235 QEN71_RS37445 LysR family transcriptional regulator insig. 41 91
o Escherichia coli ECRC100 OKFHMN_24535 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 40 89
o Escherichia coli ECRC101 MCAODC_20405 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 40 89
o Escherichia coli ECRC102 NIAGMN_22480 yeeY Uncharacterized HTH-type transcriptional regulator YeeY insig. 40 89
o Escherichia coli ECRC98 JDDGAC_28645 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 40 89
o Escherichia coli ECRC99 KEDOAH_03615 yeeY Uncharacterized HTH-type transcriptional regulator YeeY no data 40 89
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_01685 HTH-type transcriptional regulator YhaJ insig. 40 89
o Escherichia coli Nissle 1917 ECOLIN_RS11920 LysR substrate-binding domain-containing protein no data 40 89
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS03640 LysR family transcriptional regulator cofit 43 89
o Ralstonia solanacearum UW163 UW163_RS10030 LysR family transcriptional regulator insig. 43 89
o Ralstonia solanacearum PSI07 RPSI07_RS13590 LysR family transcriptional regulator insig. 43 89
o Ralstonia sp. UNC404CL21Col ABZR87_RS15530 LysR substrate-binding domain-containing protein insig. 42 89
o Enterobacter asburiae PDN3 EX28DRAFT_0543 Transcriptional regulator insig. 41 89
o Rahnella sp. WP5 EX31_RS05190 LysR family transcriptional regulator insig. 40 89
  Paraburkholderia graminis OAS925 ABIE53_006117 DNA-binding transcriptional LysR family regulator insig. 40 92
o Escherichia fergusonii Becca EFB2_01841 HTH-type transcriptional regulator YhaJ insig. 40 89
o Escherichia coli ECOR27 NOLOHH_15860 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 40 89
o Escherichia coli ECRC62 BNILDI_14760 yeeY Uncharacterized HTH-type transcriptional regulator YeeY cofit 40 89
o Escherichia coli BW25113 b2015 yeeY putative transcriptional regulator LYSR-type (VIMSS) insig. 40 89
o Burkholderia phytofirmans PsJN BPHYT_RS30350 LysR family transcriptional regulator strong 41 89
o Variovorax sp. OAS795 ABID97_RS29065 LysR family transcriptional regulator no data 41 89
o Enterobacter sp. TBS_079 MPMX20_02999 HTH-type transcriptional regulator YhaJ insig. 40 89
o Klebsiella michiganensis M5al BWI76_RS06255 LysR family transcriptional regulator insig. 39 89
o Cupriavidus basilensis FW507-4G11 RR42_RS14800 LysR family transcriptional regulator strong 42 89
o Herbaspirillum seropedicae SmR1 HSERO_RS17845 LysR family transcriptional regulator insig. 39 90
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3915 Hypothetical transcriptional regulator yeeY insig. 39 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02483 transcriptional regulator, LysR family insig. 39 92
  Shewanella loihica PV-4 Shew_2013 putative DNA-binding transcriptional regulator (RefSeq) cofit 36 90
  Burkholderia phytofirmans PsJN BPHYT_RS07085 LysR family transcriptional regulator insig. 37 90
  Klebsiella michiganensis M5al BWI76_RS16515 LysR family transcriptional regulator insig. 36 88
  Escherichia coli ECOR27 NOLOHH_17900 punR DNA-binding transcriptional activator PunR cofit 36 88
  Escherichia coli ECRC100 OKFHMN_27380 punR DNA-binding transcriptional activator PunR insig. 36 88
  Escherichia coli ECRC101 MCAODC_18030 punR DNA-binding transcriptional activator PunR insig. 36 88
  Escherichia coli ECRC102 NIAGMN_00685 punR DNA-binding transcriptional activator PunR insig. 36 88
  Escherichia coli ECRC62 BNILDI_16690 punR DNA-binding transcriptional activator PunR cofit 36 88
  Escherichia coli ECRC98 JDDGAC_01970 punR DNA-binding transcriptional activator PunR cofit 36 88
  Escherichia coli ECRC99 KEDOAH_00730 punR DNA-binding transcriptional activator PunR no data 36 88
  Escherichia coli BW25113 b1659 ydhB predicted DNA-binding transcriptional regulator (NCBI) sig. 36 88
  Escherichia fergusonii Becca EFB2_02333 putative HTH-type transcriptional regulator YahB insig. 36 88
  Escherichia coli Nissle 1917 ECOLIN_RS09250 DNA-binding transcriptional activator PunR insig. 36 88
  Enterobacter sp. TBS_079 MPMX20_01977 putative HTH-type transcriptional regulator YahB strong 35 88
  Escherichia coli BL21 ECD_01630 LysR family putative transcriptional regulator insig. 36 88
  Escherichia coli ECOR38 HEPCGN_05765 punR DNA-binding transcriptional activator PunR cofit 36 88
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02065 putative HTH-type transcriptional regulator YahB insig. 36 88
  Cupriavidus basilensis FW507-4G11 RR42_RS03595 LysR family transcriptional regulator insig. 37 88
  Shewanella sp. ANA-3 Shewana3_2061 putative DNA-binding transcriptional regulator (RefSeq) sig. 34 92
  Ralstonia sp. UNC404CL21Col ABZR87_RS17620 LysR family transcriptional regulator insig. 36 88
  Enterobacter asburiae PDN3 EX28DRAFT_1656 Transcriptional regulator insig. 35 88
  Shewanella oneidensis MR-1 SO2374 transcriptional regulator, LysR family (NCBI ptt file) insig. 34 91
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3617 LysR-family transcriptional regulator YdhB insig. 35 88
  Shewanella amazonensis SB2B Sama_1783 putative DNA-binding transcriptional regulator (RefSeq) sig. 32 92
  Paraburkholderia sabiae LMG 24235 QEN71_RS16275 LysR family transcriptional regulator insig. 35 90
  Serratia liquefaciens MT49 IAI46_11235 LysR family transcriptional regulator insig. 35 88
  Pantoea sp. MT58 IAI47_10800 LysR family transcriptional regulator sig. 36 87
o Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5181 LysR-family transcriptional regulator insig. 38 90
o Pectobacterium carotovorum WPP14 HER17_RS18770 LysR family transcriptional regulator insig. 33 90
  Serratia liquefaciens MT49 IAI46_18615 LysR family transcriptional regulator insig. 34 89
  Vibrio cholerae E7946 ATCC 55056 CSW01_13980 LysR family transcriptional regulator cofit 32 92
  Klebsiella michiganensis M5al BWI76_RS18910 LysR family transcriptional regulator insig. 34 89
o Dickeya dianthicola ME23 DZA65_RS02905 LysR family transcriptional regulator insig. 33 90
  Pseudomonas fluorescens SBW25 PFLU_RS08000 LysR family transcriptional regulator insig. 34 88
  Pseudomonas fluorescens SBW25-INTG PFLU_RS08000 LysR family transcriptional regulator insig. 34 88
o Dickeya dadantii 3937 DDA3937_RS02775 LysR family transcriptional regulator insig. 32 90
  Rahnella sp. WP5 EX31_RS12620 LysR family transcriptional regulator insig. 34 90
o Erwinia tracheiphila SCR3 LU632_RS02265 LysR family transcriptional regulator insig. 33 90
o Erwinia amylovora T8 OLJFJH_02260 LysR family transcriptional regulator insig. 33 90
  Variovorax sp. OAS795 ABID97_RS18015 LysR family transcriptional regulator insig. 36 90
o Dickeya dianthicola 67-19 HGI48_RS02750 LysR family transcriptional regulator insig. 32 90
  Vibrio cholerae E7946 ATCC 55056 CSW01_17100 LysR family transcriptional regulator insig. 34 91
  Variovorax sp. SCN45 GFF590 Transcriptional regulator, LysR family insig. 37 90
  Enterobacter asburiae PDN3 EX28DRAFT_3172 Transcriptional regulator strong 34 90
  Enterobacter sp. TBS_079 MPMX20_04013 HTH-type transcriptional regulator YhaJ sig. 34 90
  Klebsiella michiganensis M5al BWI76_RS24790 LysR family transcriptional regulator insig. 34 90
  Erwinia tracheiphila SCR3 LU632_RS11185 LysR family transcriptional regulator insig. 33 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3201 LysR-family transcriptional regulator YhaJ insig. 34 90
  Escherichia coli BL21 ECD_03709 hypothetical protein insig. 33 92
  Escherichia fergusonii Becca EFB2_04800 putative HTH-type transcriptional regulator YahB insig. 33 89
  Escherichia coli Nissle 1917 ECOLIN_RS22025 LysR substrate-binding domain-containing protein insig. 33 89
  Pseudomonas simiae WCS417 PS417_08030 transcriptional regulator strong 33 88
  Serratia liquefaciens MT49 IAI46_22280 LysR family transcriptional regulator insig. 33 90
  Pantoea sp. MT58 IAI47_02820 LysR family transcriptional regulator insig. 33 90
  Rahnella sp. WP5 EX31_RS13835 LysR family transcriptional regulator insig. 32 88
  Escherichia coli BL21 ECD_02974 LysR family putative transcriptional regulator insig. 33 90
  Escherichia fergusonii Becca EFB2_00708 HTH-type transcriptional regulator YhaJ insig. 33 90
  Escherichia coli ECOR38 HEPCGN_17285 yhaJ DNA-binding transcriptional regulator YhaJ insig. 33 90