Homologs of Sama_1062 from Shewanella amazonensis SB2B

GGDEF domain-containing protein (RefSeq)
SEED: GGDEF domain/HAMP domain protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella amazonensis SB2B Sama_1062 GGDEF domain-containing protein (RefSeq) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_3157 diguanylate cyclase with GAF sensor (RefSeq) insig. 62 92
o Shewanella oneidensis MR-1 SO3556 cyclic nucleotide phosphodiesterase, putative (NCBI ptt file) sig. 60 93
  Sphingomonas koreensis DSMZ 15582 Ga0059261_1002 diguanylate cyclase (GGDEF) domain insig. 38 39
  Paraburkholderia sabiae LMG 24235 QEN71_RS25945 sensor domain-containing diguanylate cyclase insig. 31 62
  Azospirillum sp. SherDot2 MPMX19_02228 hypothetical protein insig. 33 45
  Rhizobium sp. OAE497 ABIE40_RS04625 EAL domain-containing protein cofit 32 46
  Pseudomonas stutzeri RCH2 Psest_2562 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 40 35
  Sphingobium sp. HT1-2 GFF1874 hypothetical protein insig. 35 37
  Kangiella aquimarina DSM 16071 B158DRAFT_1127 diguanylate cyclase (GGDEF) domain insig. 34 46
  Sinorhizobium meliloti 1021 SMc00038 hypothetical protein insig. 31 45
  Magnetospirillum magneticum AMB-1 AMB_RS19705 GGDEF domain-containing protein insig. 33 42
  Shewanella amazonensis SB2B Sama_0065 response regulator receiver protein (RefSeq) insig. 30 39
  Pseudomonas sp. BP01 JOY50_RS07935 GGDEF domain-containing protein insig. 30 43
  Rhodopseudomonas palustris CGA009 TX73_016395 EAL domain-containing protein insig. 33 45
  Pantoea sp. MT58 IAI47_16400 GGDEF domain-containing protein cofit 30 34
  Rhodopseudomonas palustris CGA009 TX73_016650 EAL domain-containing protein insig. 32 34
  Shewanella sp. ANA-3 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) strong 39 26
  Rhodospirillum rubrum S1H Rru_A3391 Putative diguanylate cyclase (GGDEF domain) (NCBI) insig. 35 35
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 34 39
  Pseudomonas segetis P6 ACVTMO_RS02620 GGDEF domain-containing protein cofit 38 32
  Dechlorosoma suillum PS Dsui_3004 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 27 74
  Shewanella amazonensis SB2B Sama_2887 GGDEF domain-containing protein (RefSeq) insig. 34 36
  Pseudomonas simiae WCS417 PS417_14815 diguanylate cyclase sig. 34 40
  Pseudomonas putida KT2440 PP_3663 GGDEF domain protein sig. 34 34
  Pectobacterium carotovorum WPP14 HER17_RS03820 diguanylate cyclase cofit 31 45
  Rahnella sp. WP5 EX31_RS04155 GGDEF domain-containing protein insig. 31 35
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS07945 diguanylate cyclase cofit 30 52
  Pseudomonas stutzeri RCH2 Psest_1569 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 29 44
  Alteromonas macleodii MIT1002 MIT1002_04038 putative diguanylate cyclase AdrA insig. 27 45
  Xanthobacter sp. DMC5 GFF628 hypothetical protein insig. 27 47
  Rhodospirillum rubrum S1H Rru_A3132 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain (NCBI) insig. 37 34
  Dechlorosoma suillum PS Dsui_1789 diguanylate cyclase (GGDEF) domain-containing protein insig. 36 32
  Methylophilus sp. DMC18 GFF1420 hypothetical protein cofit 36 35
  Shewanella oneidensis MR-1 SO0437 sensory box protein (NCBI ptt file) strong 34 32
  Pseudomonas sp. DMC3 GFF3745 hypothetical protein insig. 34 36
  Paraburkholderia graminis OAS925 ABIE53_006414 diguanylate cyclase (GGDEF)-like protein insig. 32 34
  Shewanella loihica PV-4 Shew_1467 diguanylate cyclase (RefSeq) insig. 31 37
  Enterobacter sp. TBS_079 MPMX20_02274 hypothetical protein sig. 38 32
  Alteromonas macleodii MIT1002 MIT1002_00152 putative diguanylate cyclase YdaM insig. 33 35
  Bosea sp. OAE506 ABIE41_RS11330 EAL domain-containing protein insig. 33 33
  Shewanella oneidensis MR-1 SO0841 GGDEF domain protein (NCBI ptt file) insig. 31 38
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS08545 GGDEF domain-containing protein insig. 29 34
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01520 diguanylate cyclase (GGDEF) domain-containing protein insig. 35 34
  Serratia liquefaciens MT49 IAI46_24280 cyclic di-GMP phosphodiesterase cofit 34 35
  Vibrio cholerae E7946 ATCC 55056 CSW01_18925 sensor domain-containing diguanylate cyclase insig. 31 41
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4282 Protein YaiC insig. 30 36
  Erwinia amylovora T8 OLJFJH_01950 GGDEF domain-containing protein strong 30 36
  Shewanella sp. ANA-3 Shewana3_1464 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 43 21
  Paraburkholderia graminis OAS925 ABIE53_005160 diguanylate cyclase (GGDEF)-like protein strong 35 34
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS08350 PleD family two-component system response regulator insig. 35 36
  Rhodopseudomonas palustris CGA009 TX73_015465 GGDEF domain-containing protein insig. 34 33
  Serratia liquefaciens MT49 IAI46_05890 diguanylate cyclase insig. 31 40
  Paraburkholderia sabiae LMG 24235 QEN71_RS14650 diguanylate cyclase no data 31 37
  Burkholderia phytofirmans PsJN BPHYT_RS29225 diguanylate phosphodiesterase insig. 35 34
  Burkholderia phytofirmans PsJN BPHYT_RS29510 deoxyuridine 5`-triphosphate nucleotidohydrolase insig. 34 34
  Escherichia coli ECOR27 NOLOHH_18945 dosC diguanylate cyclase DosC no data 34 32
  Escherichia coli ECRC100 OKFHMN_01300 dosC diguanylate cyclase DosC insig. 34 32
  Escherichia coli ECRC101 MCAODC_16640 dosC diguanylate cyclase DosC insig. 34 32
  Escherichia coli ECRC102 NIAGMN_25430 dosC diguanylate cyclase DosC insig. 34 32
  Escherichia coli ECRC62 BNILDI_17430 dosC diguanylate cyclase DosC insig. 34 32
  Escherichia coli ECRC98 JDDGAC_03790 dosC diguanylate cyclase DosC sig. 34 32
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_02227 Diguanylate cyclase DosC insig. 34 32
  Escherichia coli BW25113 b1490 yddV predicted diguanylate cyclase (RefSeq) strong 34 32
  Herbaspirillum seropedicae SmR1 HSERO_RS01285 diguanylate cyclase insig. 32 34
  Marinobacter adhaerens HP15 HP15_4072 diguanylate cyclase with PAS/PAC sensor insig. 25 93
  Escherichia coli BL21 ECD_01448 diguanylate cyclase, cold- and stationary phase-induced oxygen-dependent biofilm regulator no data 34 32
  Escherichia coli ECOR38 HEPCGN_26495 dosC diguanylate cyclase DosC insig. 34 32
  Pantoea sp. MT58 IAI47_19665 diguanylate cyclase insig. 30 42
  Pseudomonas fluorescens FW300-N2E3 AO353_27105 diguanylate cyclase insig. 29 47
  Bosea sp. OAE506 ABIE41_RS19250 EAL domain-containing protein insig. 34 33
  Rahnella sp. WP5 EX31_RS12105 bifunctional diguanylate cyclase/phosphodiesterase insig. 32 44
  Shewanella amazonensis SB2B Sama_3016 GGDEF domain-containing protein (RefSeq) insig. 32 40
  Marinobacter adhaerens HP15 HP15_3549 diguanylate cyclase insig. 32 38
  Shewanella amazonensis SB2B Sama_2871 response regulator (RefSeq) insig. 32 34
  Desulfovibrio vulgaris Hildenborough JW710 DVU0940 pleD GGDEF domain protein (TIGR) sig. 31 43
  Alteromonas macleodii MIT1002 MIT1002_00653 putative diguanylate cyclase AdrA insig. 31 37
  Pseudomonas orientalis W4I3 QF045_RS13395 GGDEF domain-containing protein cofit 33 38
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17930 sensor domain-containing diguanylate cyclase cofit 27 53
  Paraburkholderia graminis OAS925 ABIE53_005195 diguanylate cyclase (GGDEF)-like protein sig. 36 34
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01476 diguanylate cyclase/phosphodiesterase insig. 35 34
  Marinobacter adhaerens HP15 HP15_3976 protein containing diguanylate cyclase, predicted domains sig. 26 53
  Dechlorosoma suillum PS Dsui_2412 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 36 33
  Rhizobium sp. OAE497 ABIE40_RS23660 GGDEF domain-containing protein insig. 35 35
  Dechlorosoma suillum PS Dsui_2893 diguanylate cyclase (GGDEF) domain-containing protein cofit 34 35
  Enterobacter sp. TBS_079 MPMX20_00975 putative diguanylate cyclase DgcC insig. 30 39
  Marinobacter adhaerens HP15 HP15_4169 diguanylate cyclase (GGDEF domain) insig. 34 32
  Methylophilus sp. DMC18 GFF1417 Protein-glutamate methylesterase/protein-glutamine glutaminase insig. 34 38
  Kangiella aquimarina DSM 16071 B158DRAFT_0304 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 29 47
  Escherichia coli ECOR27 NOLOHH_01540 adrA diguanylate cyclase AdrA insig. 28 36
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03289 putative diguanylate cyclase DgcC insig. 28 36
  Escherichia coli ECRC99 KEDOAH_27140 dosC diguanylate cyclase DosC no data 34 32
  Pseudomonas sp. DMC3 GFF2244 hypothetical protein cofit 30 40
  Shewanella oneidensis MR-1 SO3084 sensory box protein (NCBI ptt file) sig. 42 21
  Ralstonia sp. UNC404CL21Col ABZR87_RS08150 EAL domain-containing protein insig. 38 33
  Pseudomonas stutzeri RCH2 Psest_4293 PAS domain S-box/diguanylate cyclase (GGDEF) domain sig. 33 38
  Marinobacter adhaerens HP15 HP15_947 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 31 39
  Escherichia coli ECRC100 OKFHMN_08615 adrA diguanylate cyclase AdrA insig. 29 36
  Escherichia coli ECRC101 MCAODC_27840 adrA diguanylate cyclase AdrA insig. 29 36
  Escherichia coli ECRC102 NIAGMN_06670 adrA diguanylate cyclase AdrA insig. 29 36