Homologs of cpdB from Shewanella loihica PV-4

cpdB: bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq)
SEED: 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)
KEGG: 2',3'-cyclic-nucleotide 2'-phosphodiesterase ; 3'-nucleotidase

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2162 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) insig. 100 100
o Shewanella amazonensis SB2B Sama_1563 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) insig. 77 99
o Shewanella sp. ANA-3 Shewana3_1585 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (RefSeq) insig. 76 99
o Shewanella oneidensis MR-1 SO3565 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase (NCBI ptt file) insig. 75 99
o Vibrio cholerae E7946 ATCC 55056 CSW01_12970 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 57 95
o Pectobacterium carotovorum WPP14 HER17_RS03950 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase cofit 55 95
o Enterobacter asburiae PDN3 EX28DRAFT_3400 2',3'-cyclic-nucleotide 2'-phosphodiesterase insig. 54 99
o Serratia liquefaciens MT49 IAI46_01740 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 55 95
o Enterobacter sp. TBS_079 MPMX20_00491 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 54 99
o Klebsiella michiganensis M5al BWI76_RS02730 2',3'-cyclic-nucleotide 2'-phosphodiesterase insig. 53 99
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF866 '2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16)' transl_table=11 insig. 54 99
o Rahnella sp. WP5 EX31_RS08725 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 55 95
o Dickeya dianthicola 67-19 HGI48_RS17240 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 56 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03820 '2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase' transl_table=11 insig. 52 99
o Pantoea sp. MT58 IAI47_02690 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 55 94
o Escherichia fergusonii Becca EFB2_04315 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 52 99
o Escherichia coli ECOR27 NOLOHH_04305 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase cofit 52 99
o Escherichia coli ECRC62 BNILDI_07215 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase insig. 52 99
o Escherichia coli BW25113 b4213 cpdB bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic precursor protein (NCBI) insig. 52 99
o Escherichia coli ECOR38 HEPCGN_10240 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase cofit 52 99
o Escherichia coli Nissle 1917 ECOLIN_RS24475 2',3'-cyclic-nucleotide 2'-phosphodiesterase insig. 52 99
o Escherichia coli ECRC101 OKFHMN_12045 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase insig. 52 99
o Escherichia coli ECRC101 MCAODC_02560 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase insig. 52 99
o Escherichia coli ECRC102 NIAGMN_09895 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase insig. 52 99
o Escherichia coli ECRC99 KEDOAH_16110 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase no data 52 99
o Dickeya dianthicola ME23 DZA65_RS18330 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 55 94
o Dickeya dadantii 3937 DDA3937_RS17185 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 56 94
o Escherichia coli ECRC98 JDDGAC_15685 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase no data 52 99
o Escherichia coli BL21 ECD_04085 2':3'-cyclic-nucleotide 2'-phosphodiesterase insig. 52 99
o Dinoroseobacter shibae DFL-12 Dshi_2189 5'-Nucleotidase domain protein (RefSeq) sig. 48 94
o Rhizobium sp. OAE497 ABIE40_RS08240 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 47 94
o Phaeobacter inhibens DSM 17395 PGA1_c18140 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB insig. 48 94
o Sinorhizobium meliloti 1021 SMc04449 bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein insig. 46 95
o Agrobacterium fabrum C58 Atu1210 putative 2,3-cyclic nucleotide 2-phosphodiesterase/3-nucleotidase insig. 45 94
o Ralstonia solanacearum GMI1000 RS_RS16850 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 38 97
o Ralstonia sp. UNC404CL21Col ABZR87_RS04330 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 37 98
o Ralstonia solanacearum PSI07 RPSI07_RS08230 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 38 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS09040 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 38 96
o Ralstonia solanacearum UW163 UW163_RS04555 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 38 96
o Rhodanobacter denitrificans MT42 LRK55_RS10055 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase cofit 37 95
o Acidovorax sp. GW101-3H11 Ac3H11_3791 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) insig. 38 85
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS10415 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 36 95
o Variovorax sp. SCN45 GFF5698 2',3'-cyclic-nucleotide 2'-phosphodiesterase (EC 3.1.4.16) / 3'-nucleotidase (EC 3.1.3.6) insig. 39 84
o Dyella japonica UNC79MFTsu3.2 ABZR86_RS16000 bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 38 83
o Rhodanobacter sp. FW510-T8 OKGIIK_13510 ushA bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase insig. 38 84
o Cupriavidus basilensis FW507-4G11 RR42_RS03845 2', 3'-cyclic nucleotide 2'-phosphodiesterase insig. 40 82
  Phaeobacter inhibens DSM 17395 PGA1_c30230 2',3'-cyclic-nucleotide 2'-phosphodiesterase CpdB cofit 33 83
o Bacteroides thetaiotaomicron VPI-5482 BT1236 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor (NCBI ptt file) insig. 23 86
  Pectobacterium carotovorum WPP14 HER17_RS21310 5'-nucleotidase C-terminal domain-containing protein insig. 26 74
  Bacteroides ovatus ATCC 8483 BACOVA_00529 5'-nucleotidase, C-terminal domain protein insig. 24 71
  Vibrio cholerae E7946 ATCC 55056 CSW01_12235 bifunctional metallophosphatase/5'-nucleotidase insig. 25 89
  Serratia liquefaciens MT49 IAI46_24200 5'-nucleotidase C-terminal domain-containing protein insig. 25 86
o Bacteroides stercoris CC31F HMPREF1181_RS04030 bifunctional metallophosphatase/5'-nucleotidase insig. 23 86
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS17715 bifunctional metallophosphatase/5'-nucleotidase insig. 24 71
  Phocaeicola dorei CL03T12C01 ABI39_RS13925 bifunctional metallophosphatase/5'-nucleotidase cofit 24 71
  Pectobacterium carotovorum WPP14 HER17_RS15670 bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA cofit 25 70
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_20715 metallophosphatase cofit 31 37
  Dickeya dadantii 3937 DDA3937_RS05815 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 25 70
  Dickeya dianthicola ME23 DZA65_RS06190 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 25 70
  Dickeya dianthicola 67-19 HGI48_RS05865 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 25 70
  Bacteroides thetaiotaomicron VPI-5482 BT2440 5'-nucleotidase precursor (NCBI ptt file) sig. 30 42
  Bacteroides stercoris CC31F HMPREF1181_RS03625 metallophosphoesterase insig. 29 42
  Serratia liquefaciens MT49 IAI46_05290 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 24 81
  Klebsiella michiganensis M5al BWI76_RS06865 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 23 71
  Escherichia coli Nissle 1917 ECOLIN_RS02845 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 23 69
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4400 'UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5)' transl_table=11 insig. 23 67
  Escherichia coli ECOR27 NOLOHH_01040 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase cofit 23 69
  Escherichia coli ECRC62 BNILDI_22460 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 23 69
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03194 Protein UshA insig. 23 69
  Escherichia coli BL21 ECD_00431 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 23 69
  Escherichia fergusonii Becca EFB2_03578 Protein UshA insig. 23 69
  Escherichia coli BW25113 b0480 ushA UDP-sugar hydrolase (NCBI) insig. 23 69
  Escherichia coli ECRC101 OKFHMN_08110 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 23 66
  Escherichia coli ECRC101 MCAODC_27330 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 23 66
  Escherichia coli ECRC102 NIAGMN_06160 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 23 66
  Escherichia coli ECRC98 JDDGAC_11755 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase no data 23 66
  Escherichia coli ECRC99 KEDOAH_19860 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase no data 23 66
  Vibrio cholerae E7946 ATCC 55056 CSW01_10820 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 24 70
  Sinorhizobium meliloti 1021 SMc04018 5'-nucleotidase insig. 24 79
  Enterobacter sp. TBS_079 MPMX20_01081 Protein UshA insig. 21 71
  Escherichia coli ECOR38 HEPCGN_06730 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase cofit 23 66
  Bacteroides ovatus ATCC 8483 BACOVA_01578 Ser/Thr phosphatase family protein insig. 25 47
  Enterobacter asburiae PDN3 EX28DRAFT_2478 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases insig. 21 71
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS00800 metallophosphoesterase no data 28 36
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS01000 metallophosphoesterase no data 28 36
  Shewanella sp. ANA-3 Shewana3_2454 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) sig. 23 69
  Erwinia tracheiphila SCR3 LU632_RS18065 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA insig. 24 65
  Pantoea sp. MT58 IAI47_14425 bifunctional UDP-sugar hydrolase/5'-nucleotidase insig. 24 66
  Phaeobacter inhibens DSM 17395 PGA1_c12170 putative 5'-nucleotidase insig. 24 69
  Pseudomonas putida KT2440 PP_1414 5'-nucleotidase - 2',3'-cyclic phosphodiesterase insig. 23 70
  Acidovorax sp. GW101-3H11 Ac3H11_2924 5'-nucleotidase (EC 3.1.3.5) insig. 21 76
  Shewanella loihica PV-4 Shew_2135 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) insig. 26 44
  Shewanella oneidensis MR-1 SO2001 ushA 5'-nucleotidase (NCBI ptt file) insig. 23 70
  Dinoroseobacter shibae DFL-12 Dshi_0849 5'-Nucleotidase domain protein (RefSeq) insig. 26 65
  Rhizobium sp. OAE497 ABIE40_RS16220 5'-nucleotidase C-terminal domain-containing protein insig. 28 37
  Agrobacterium fabrum C58 Atu3770 5'-nucleotidase insig. 23 84
  Shewanella amazonensis SB2B Sama_2021 ushA bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor (RefSeq) sig. 23 64
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF1113 '5'-nucleotidase (EC 3.1.3.5)' transl_table=11 insig. 22 71
  Azospirillum sp. SherDot2 MPMX19_05245 Trifunctional nucleotide phosphoesterase protein YfkN insig. 26 35
  Escherichia coli ECOR38 HEPCGN_12330 multifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-nucleotidase/3'-nucleotidase cofit 25 37