Homologs of SO1551 from Shewanella oneidensis MR-1

GGDEF domain protein (NCBI ptt file)
SEED: GGDEF domain family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1551 GGDEF domain protein (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_2884 diguanylate cyclase (RefSeq) sig. 95 100
o Shewanella amazonensis SB2B Sama_2418 GGDEF domain-containing protein (RefSeq) strong 81 100
o Shewanella loihica PV-4 Shew_2754 diguanylate cyclase (RefSeq) strong 77 100
o Alteromonas macleodii MIT1002 MIT1002_00987 Stalked cell differentiation-controlling protein insig. 30 93
o Marinobacter adhaerens HP15 HP15_251 diguanylate cyclase cofit 30 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_04610 GGDEF domain-containing protein insig. 29 96
  Pseudomonas sp. S08-1 OH686_12185 GGDEF domain protein cofit 36 53
  Pseudomonas stutzeri RCH2 Psest_0188 diguanylate cyclase (GGDEF) domain insig. 35 53
  Pseudomonas sp. RS175 PFR28_04630 hypothetical protein insig. 33 59
  Pseudomonas fluorescens FW300-N2E3 AO353_10960 hypothetical protein insig. 36 53
  Pseudomonas fluorescens GW456-L13 PfGW456L13_588 GGDEF domain protein insig. 33 59
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1881 GGDEF domain protein insig. 33 62
  Pseudomonas putida KT2440 PP_0129 GGDEF domain protein sig. 31 66
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4156 GGDEF domain protein insig. 35 53
  Pseudomonas fluorescens FW300-N2C3 AO356_11435 hypothetical protein insig. 35 53
  Pseudomonas syringae pv. syringae B728a Psyr_0266 GGDEF domain protein insig. 33 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_0266 GGDEF domain protein insig. 33 57
  Pseudomonas fluorescens SBW25 PFLU_RS00425 diguanylate cyclase cofit 31 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS00425 diguanylate cyclase sig. 31 62
  Pseudomonas simiae WCS417 PS417_00435 DeoR faimly transcriptional regulator insig. 32 62
  Shewanella loihica PV-4 Shew_3381 diguanylate cyclase (RefSeq) strong 41 40
  Shewanella amazonensis SB2B Sama_1759 GGDEF domain-containing protein (RefSeq) insig. 40 38
  Herbaspirillum seropedicae SmR1 HSERO_RS13895 diguanylate cyclase insig. 28 62
  Acidovorax sp. GW101-3H11 Ac3H11_4322 Bll3041 protein insig. 46 30
  Shewanella amazonensis SB2B Sama_3210 GGDEF domain-containing protein (RefSeq) strong 40 36
  Pseudomonas stutzeri RCH2 Psest_0767 diguanylate cyclase (GGDEF) domain sig. 42 31
  Pseudomonas syringae pv. syringae B728a Psyr_3653 GGDEF domain protein insig. 42 31
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3653 GGDEF domain protein insig. 42 31
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_359 GGDEF domain protein insig. 39 31
  Acidovorax sp. GW101-3H11 Ac3H11_3285 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 39 43
  Desulfovibrio vulgaris Miyazaki F DvMF_2637 diguanylate cyclase with extracellular sensor (RefSeq) insig. 40 32
  Shewanella sp. ANA-3 Shewana3_3733 diguanylate cyclase (RefSeq) sig. 40 39
  Pseudomonas sp. S08-1 OH686_03265 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 39 31
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2168 GGDEF domain protein insig. 39 30
  Shewanella oneidensis MR-1 SO4207 GGDEF domain protein (NCBI ptt file) strong 38 39
  Pseudomonas stutzeri RCH2 Psest_2106 diguanylate cyclase (GGDEF) domain sig. 40 32
  Marinobacter adhaerens HP15 HP15_1531 diguanylate cyclase (GGDEF domain) insig. 37 31
  Pseudomonas stutzeri RCH2 Psest_0703 diguanylate cyclase (GGDEF) domain insig. 40 30
  Desulfovibrio vulgaris Miyazaki F DvMF_1537 diguanylate cyclase (RefSeq) insig. 41 30
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1617 COG2199: FOG: GGDEF domain insig. 41 30
  Azospirillum brasilense Sp245 AZOBR_RS06990 response regulator receiver modulated diguanylate cyclase insig. 42 30
  Pseudomonas fluorescens FW300-N2C3 AO356_23360 diguanylate cyclase insig. 42 30
  Pseudomonas simiae WCS417 PS417_19135 DeoR faimly transcriptional regulator insig. 38 31
  Pseudomonas sp. RS175 PFR28_02342 hypothetical protein insig. 38 36
  Shewanella amazonensis SB2B Sama_3137 response regulator receiver protein (RefSeq) strong 40 33
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2528 GGDEF domain protein insig. 35 39
  Desulfovibrio vulgaris Hildenborough JW710 DVU1805 GGDEF domain protein (TIGR) insig. 34 41
  Pseudomonas fluorescens SBW25 PFLU_RS21130 GGDEF domain-containing protein insig. 38 31
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21130 GGDEF domain-containing protein insig. 38 31
  Shewanella amazonensis SB2B Sama_2887 GGDEF domain-containing protein (RefSeq) insig. 36 33
  Alteromonas macleodii MIT1002 MIT1002_00706 Bacteriophytochrome cph2 insig. 35 35
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS04610 GGDEF domain-containing protein insig. 34 45
  Rhodopseudomonas palustris CGA009 TX73_016195 PleD family two-component system response regulator insig. 39 31
  Pseudomonas sp. S08-1 OH686_05940 GGDEF domain protein cofit 38 33
  Shewanella sp. ANA-3 Shewana3_0570 diguanylate cyclase (RefSeq) insig. 37 31
  Desulfovibrio vulgaris Miyazaki F DvMF_0509 diguanylate cyclase (RefSeq) insig. 39 30
  Dechlorosoma suillum PS Dsui_1789 diguanylate cyclase (GGDEF) domain-containing protein insig. 28 61
  Pseudomonas sp. RS175 PFR28_02096 hypothetical protein insig. 29 49
  Pseudomonas putida KT2440 PP_2505 GAF domain/GGDEF domain protein insig. 41 31
  Pseudomonas fluorescens FW300-N2C3 AO356_03505 hypothetical protein insig. 38 31
  Shewanella oneidensis MR-1 SO0569 sensory box/GGDEF family protein (NCBI ptt file) cofit 38 31
  Shewanella loihica PV-4 Shew_0452 diguanylate cyclase (RefSeq) insig. 38 33
  Desulfovibrio vulgaris Hildenborough JW710 DVU0940 pleD GGDEF domain protein (TIGR) sig. 40 31
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_1642 diguanylate cyclase (GGDEF domain) with PAS/PAC sensor insig. 38 31
  Pseudomonas fluorescens FW300-N2C3 AO356_24210 diguanylate cyclase sig. 37 31
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4533 hypothetical protein insig. 36 31
  Shewanella sp. ANA-3 Shewana3_2227 diguanylate cyclase (RefSeq) insig. 32 47
  Pseudomonas sp. RS175 PFR28_04429 hypothetical protein insig. 41 30
  Pseudomonas fluorescens FW300-N2C3 AO356_08175 diguanylate cyclase strong 38 30
  Pseudomonas sp. RS175 PFR28_00898 hypothetical protein cofit 38 31
  Pseudomonas putida KT2440 PP_1411 GGDEF domain protein insig. 36 31
  Desulfovibrio vulgaris Miyazaki F DvMF_3203 diguanylate cyclase (RefSeq) cofit 41 30
  Shewanella amazonensis SB2B Sama_0530 response regulator receiver protein (RefSeq) cofit 40 32
  Desulfovibrio vulgaris Hildenborough JW710 DVU0416 GGDEF domain protein (TIGR) insig. 39 30
  Pseudomonas fluorescens FW300-N2E3 AO353_02110 hypothetical protein insig. 37 31
  Rhizobium sp. OAE497 ABIE40_RS10555 sensor domain-containing diguanylate cyclase insig. 36 39
  Magnetospirillum magneticum AMB-1 AMB_RS06820 GGDEF domain-containing protein cofit 38 37
  Pseudomonas sp. RS175 PFR28_05224 Regulator of RpoS insig. 38 30
  Herbaspirillum seropedicae SmR1 HSERO_RS03660 diguanylate cyclase insig. 37 39
  Pseudomonas putida KT2440 PP_1155 YaiC/YhcK/ArdA family protein sig. 36 34
  Azospirillum sp. SherDot2 MPMX19_01660 Response regulator PleD insig. 36 32
  Marinobacter adhaerens HP15 HP15_611 diguanylate cyclase insig. 36 30
  Ralstonia solanacearum GMI1000 RS_RS19075 sensor domain-containing diguanylate cyclase insig. 39 32
  Rhodopseudomonas palustris CGA009 TX73_019845 diguanylate cyclase insig. 32 47
  Pseudomonas syringae pv. syringae B728a Psyr_1125 GGDEF domain protein insig. 41 30
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1125 GGDEF domain protein insig. 41 30
  Pseudomonas putida KT2440 PP_2097 Sensory box protein insig. 39 31
  Pseudomonas fluorescens FW300-N2E3 AO353_21315 histidine kinase insig. 37 34
  Lysobacter sp. OAE881 ABIE51_RS13470 GGDEF domain-containing protein insig. 37 31
  Marinobacter adhaerens HP15 HP15_3763 response regulator receiver domain protein (CheY) insig. 33 43
  Azospirillum sp. SherDot2 MPMX19_01522 Response regulator PleD insig. 39 35
  Shewanella sp. ANA-3 Shewana3_0269 diguanylate cyclase (RefSeq) cofit 37 32
  Lysobacter sp. OAE881 ABIE51_RS04020 sensor domain-containing diguanylate cyclase insig. 36 39
  Shewanella oneidensis MR-1 SO2049 GGDEF family protein (NCBI ptt file) insig. 35 36
  Magnetospirillum magneticum AMB-1 AMB_RS09815 GGDEF domain-containing protein insig. 34 36
  Pectobacterium carotovorum WPP14 HER17_RS05020 sensor domain-containing diguanylate cyclase cofit 39 31
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_03607 PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein insig. 36 30
  Agrobacterium fabrum C58 Atu1297 two component response regulator insig. 35 31
  Pseudomonas sp. S08-1 OH686_00995 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 35 41