Homologs of SO1500 from Shewanella oneidensis MR-1

sensory box protein (NCBI ptt file)
SEED: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1500 sensory box protein (NCBI ptt file) strong 100 100
o Shewanella sp. ANA-3 Shewana3_2929 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 91 100
o Shewanella loihica PV-4 Shew_2778 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 64 100
o Shewanella amazonensis SB2B Sama_2448 sensory box protein (RefSeq) insig. 61 100
  Castellaniella sp019104865 MT123 ABCV34_RS00960 EAL domain-containing protein insig. 54 55
  Castellaniella sp019104865 MT123 ABCV34_RS04775 EAL domain-containing protein cofit 51 57
  Cupriavidus basilensis FW507-4G11 RR42_RS16480 diguanylate cyclase insig. 50 54
  Ralstonia sp. UNC404CL21Col ABZR87_RS23350 EAL domain-containing protein insig. 50 55
  Paraburkholderia sabiae LMG 24235 QEN71_RS30040 EAL domain-containing protein insig. 49 55
  Cupriavidus basilensis FW507-4G11 RR42_RS09815 diguanylate cyclase insig. 48 55
  Magnetospirillum magneticum AMB-1 AMB_RS23380 PAS domain S-box protein insig. 48 55
  Shewanella amazonensis SB2B Sama_3298 sensory box protein (RefSeq) insig. 39 68
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 40 68
  Shewanella sp. ANA-3 Shewana3_3829 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) cofit 40 68
  Dechlorosoma suillum PS Dsui_1429 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 44 56
  Magnetospirillum magneticum AMB-1 AMB_RS23535 PAS domain S-box protein cofit 39 71
  Alteromonas macleodii MIT1002 MIT1002_02202 Cyclic di-GMP phosphodiesterase Gmr insig. 51 43
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_725 Sensory box/GGDEF family protein insig. 36 69
  Pseudomonas sp. S08-1 OH686_13050 Sensory box/GGDEF family protein cofit 37 68
  Lysobacter sp. OAE881 ABIE51_RS17335 EAL domain-containing protein insig. 39 67
  Dechlorosoma suillum PS Dsui_3104 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein strong 42 60
  Dechlorosoma suillum PS Dsui_0894 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 65
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2007 Sensory box/GGDEF family protein insig. 36 69
  Pseudomonas stutzeri RCH2 Psest_4097 PAS domain S-box/diguanylate cyclase (GGDEF) domain strong 37 68
  Pseudomonas fluorescens FW300-N2E3 AO353_10050 diguanylate cyclase insig. 36 69
  Dechlorosoma suillum PS Dsui_0262 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 45 56
  Herbaspirillum seropedicae SmR1 HSERO_RS12780 diguanylate phosphodiesterase sig. 41 62
  Pseudomonas fluorescens FW300-N2C3 AO356_11995 diguanylate cyclase insig. 36 69
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 42 57
  Acidovorax sp. GW101-3H11 Ac3H11_448 Sensory box/GGDEF family protein insig. 44 56
  Pseudomonas sp. RS175 PFR28_04522 hypothetical protein insig. 36 69
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4274 Sensory box/GGDEF family protein insig. 35 69
  Shewanella amazonensis SB2B Sama_0142 sensory box protein (RefSeq) sig. 43 56
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 56
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 42 56
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 35 78
  Pseudomonas fluorescens SBW25 PFLU_RS29895 EAL domain-containing protein insig. 35 68
  Pseudomonas fluorescens SBW25-INTG PFLU_RS29895 EAL domain-containing protein insig. 35 68
  Shewanella loihica PV-4 Shew_0041 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) strong 42 56
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 41 56
  Burkholderia phytofirmans PsJN BPHYT_RS33250 diguanylate phosphodiesterase insig. 41 62
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 35 78
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 36 78
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 41 56
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 41 56
  Pseudomonas syringae pv. syringae B728a Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 60
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4642 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 60
  Pseudomonas sp. RS175 PFR28_04079 Membrane-bound lytic murein transglycosylase F insig. 41 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS17290 EAL domain-containing protein strong 34 75
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 42 57
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 41 57
  Pseudomonas simiae WCS417 PS417_28235 diguanylate cyclase insig. 35 68
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 41 57
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 43 54
  Pseudomonas sp. S08-1 OH686_11550 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 67
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 36 78
  Magnetospirillum magneticum AMB-1 AMB_RS06515 PAS domain S-box protein insig. 41 55
  Pseudomonas sp. S08-1 OH686_14965 Sensory box/GGDEF family protein cofit 41 56
  Kangiella aquimarina DSM 16071 B158DRAFT_0509 diguanylate cyclase (GGDEF) domain strong 38 68
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 35 78
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 37 69
  Magnetospirillum magneticum AMB-1 AMB_RS15005 two-component system response regulator insig. 36 69
  Shewanella sp. ANA-3 Shewana3_4029 diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) cofit 41 56
  Dechlorosoma suillum PS Dsui_2148 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 56
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 34 78
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 35 78
  Azospirillum sp. SherDot2 MPMX19_00480 hypothetical protein insig. 42 56
  Shewanella oneidensis MR-1 SO0141 sensory box protein (NCBI ptt file) strong 40 55
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 35 78
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 78
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 35 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS22225 sensor domain-containing diguanylate cyclase cofit 33 75
  Ralstonia solanacearum UW163 UW163_RS22770 sensor domain-containing diguanylate cyclase insig. 33 75
  Dechlorosoma suillum PS Dsui_0749 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 42 58
  Shewanella sp. ANA-3 Shewana3_0133 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 40 56
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 36 68
  Ralstonia solanacearum PSI07 RPSI07_RS00975 sensor domain-containing diguanylate cyclase cofit 33 75
  Pseudomonas sp. S08-1 OH686_16235 Sensory box/GGDEF family protein insig. 35 78
  Ralstonia solanacearum GMI1000 RS_RS18380 sensor domain-containing diguanylate cyclase strong 33 75
  Dechlorosoma suillum PS Dsui_2365 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 41 55
  Dechlorosoma suillum PS Dsui_2160 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 41 57
  Magnetospirillum magneticum AMB-1 AMB_RS11515 DUF3365 domain-containing protein insig. 42 56
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 35 78
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 40 57
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 40 57
  Azospirillum brasilense Sp245 AZOBR_RS04390 signal peptide protein cofit 40 61
  Alteromonas macleodii MIT1002 MIT1002_01290 Bacteriophytochrome cph2 cofit 36 70
  Cupriavidus basilensis FW507-4G11 RR42_RS10125 diguanylate phosphodiesterase insig. 40 62
  Magnetospirillum magneticum AMB-1 AMB_RS06165 CBS domain-containing protein insig. 41 55
  Herbaspirillum seropedicae SmR1 HSERO_RS08500 hypothetical protein insig. 48 44
  Acidovorax sp. GW101-3H11 Ac3H11_183 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 57
  Variovorax sp. SCN45 GFF1448 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) sig. 40 56
  Acidovorax sp. GW101-3H11 Ac3H11_402 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 58
  Shewanella amazonensis SB2B Sama_0378 sensory box protein (RefSeq) sig. 37 68
  Pseudomonas putida KT2440 PP_0386 Sensory box protein sig. 40 56
  Paraburkholderia sabiae LMG 24235 QEN71_RS14325 EAL domain-containing protein insig. 42 57
  Burkholderia phytofirmans PsJN BPHYT_RS27880 diguanylate phosphodiesterase insig. 39 56
  Magnetospirillum magneticum AMB-1 AMB_RS22740 GGDEF domain-containing protein insig. 40 60
  Azospirillum sp. SherDot2 MPMX19_04641 hypothetical protein insig. 38 60