Conservation of cofitness between Xcc-8004.1220.1 and Xcc-8004.466.1 in Xanthomonas campestris pv. campestris strain 8004

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.1220.1 Protein YicC 1.0 Xcc-8004.466.1 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) 0.33 11
Klebsiella michiganensis M5al 0.44 BWI76_RS27395 hypothetical protein 0.56 BWI76_RS04020 4-hydroxybenzoate 3-monooxygenase low > 92
Serratia liquefaciens MT49 0.44 IAI46_24855 YicC family protein 0.48 IAI46_12875 4-hydroxybenzoate 3-monooxygenase low > 86
Pseudomonas fluorescens GW456-L13 0.43 PfGW456L13_783 Protein YicC 0.65 PfGW456L13_1787 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) low > 87
Pseudomonas fluorescens FW300-N2C3 0.43 AO356_12495 hypothetical protein 0.66 AO356_05295 4-hydroxybenzoate 3-monooxygenase low > 104
Pseudomonas sp. RS175 0.43 PFR28_04421 hypothetical protein 0.65 PFR28_00545 p-hydroxybenzoate hydroxylase — —
Pseudomonas putida KT2440 0.43 PP_5295 conserved protein of unknown function 0.60 PP_3537 p-hydroxybenzoate hydroxylase low > 96
Pseudomonas fluorescens FW300-N2E3 0.43 AO353_09265 hypothetical protein 0.66 AO353_03895 4-hydroxybenzoate 3-monooxygenase low > 101
Pseudomonas fluorescens SBW25 0.43 PFLU_RS29495 YicC family protein 0.63 PFLU_RS07435 4-hydroxybenzoate 3-monooxygenase low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS29495 YicC family protein 0.63 PFLU_RS07435 4-hydroxybenzoate 3-monooxygenase low > 109
Pseudomonas simiae WCS417 0.42 PS417_27815 hypothetical protein 0.61 PS417_07330 4-hydroxybenzoate 3-monooxygenase low > 88
Pseudomonas fluorescens FW300-N2E2 0.42 Pf6N2E2_4364 Protein YicC 0.66 Pf6N2E2_2914 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) (from data) low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.42 Psyr_0212 Conserved hypothetical protein 255 0.61 Psyr_3500 4-hydroxybenzoate 3-monooxygenase low > 86
Pseudomonas syringae pv. syringae B728a 0.42 Psyr_0212 Conserved hypothetical protein 255 0.61 Psyr_3500 4-hydroxybenzoate 3-monooxygenase low > 86
Pseudomonas fluorescens FW300-N1B4 0.41 Pf1N1B4_2116 Protein YicC 0.66 Pf1N1B4_703 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) — —
Herbaspirillum seropedicae SmR1 0.35 HSERO_RS10650 hypothetical protein 0.47 HSERO_RS19905 4-hydroxybenzoate 3-monooxygenase low > 78
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS04905 hypothetical protein 0.56 RR42_RS21940 4-hydroxybenzoate 3-monooxygenase (EC 1.14.13.2) (from data) — —
Burkholderia phytofirmans PsJN 0.31 BPHYT_RS15320 hypothetical protein 0.47 BPHYT_RS11060 4-hydroxybenzoate 3-monooxygenase low > 109
Paraburkholderia graminis OAS925 0.31 ABIE53_003233 uncharacterized protein (TIGR00255 family) 0.46 ABIE53_002292 p-hydroxybenzoate 3-monooxygenase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.31 H281DRAFT_04007 TIGR00255 family protein 0.46 H281DRAFT_01166 p-hydroxybenzoate 3-monooxygenase low > 103
Paraburkholderia sabiae LMG 24235 0.30 QEN71_RS03650 YicC/YloC family endoribonuclease 0.50 QEN71_RS18085 4-hydroxybenzoate 3-monooxygenase low > 153
Dinoroseobacter shibae DFL-12 0.30 Dshi_1528 domain of unknown function DUF1732 (RefSeq) 0.53 Dshi_3479 4-hydroxybenzoate 3-monooxygenase (RefSeq) low > 64
Ralstonia solanacearum GMI1000 0.30 RS_RS10815 YicC family protein 0.52 RS_RS11255 4-hydroxybenzoate 3-monooxygenase — —
Acidovorax sp. GW101-3H11 0.30 Ac3H11_3667 Protein YicC 0.58 Ac3H11_3993 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) — —
Ralstonia solanacearum IBSBF1503 0.29 RALBFv3_RS03330 YicC family protein 0.54 RALBFv3_RS03810 4-hydroxybenzoate 3-monooxygenase low > 76
Ralstonia solanacearum UW163 0.29 UW163_RS10390 YicC family protein 0.54 UW163_RS09860 4-hydroxybenzoate 3-monooxygenase — —
Ralstonia solanacearum PSI07 0.29 RPSI07_RS13855 YicC family protein 0.54 RPSI07_RS13420 4-hydroxybenzoate 3-monooxygenase low > 81
Variovorax sp. OAS795 0.29 ABID97_RS23655 YicC/YloC family endoribonuclease 0.62 ABID97_RS14945 4-hydroxybenzoate 3-monooxygenase low > 91
Phaeobacter inhibens DSM 17395 0.29 PGA1_c15840 TIGR00255 family protein 0.56 PGA1_c02810 P-hydroxybenzoate hydroxylase PobA low > 62
Ralstonia sp. UNC404CL21Col 0.29 ABZR87_RS15240 YicC/YloC family endoribonuclease 0.53 ABZR87_RS15740 4-hydroxybenzoate 3-monooxygenase low > 80
Variovorax sp. SCN45 0.28 GFF2378 UPF0701 protein YicC 0.62 GFF1173 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.28 GFF3251 Protein YicC 0.56 GFF4727 P-hydroxybenzoate hydroxylase (EC 1.14.13.2) — —
Magnetospirillum magneticum AMB-1 0.27 AMB_RS03835 YicC family protein 0.60 AMB_RS01315 4-hydroxybenzoate 3-monooxygenase low > 64
Bosea sp. OAE506 0.26 ABIE41_RS17740 YicC/YloC family endoribonuclease 0.54 ABIE41_RS23560 4-hydroxybenzoate 3-monooxygenase low > 77
Castellaniella sp019104865 MT123 0.26 ABCV34_RS03510 DUF1732 domain-containing protein 0.58 ABCV34_RS02735 4-hydroxybenzoate 3-monooxygenase low > 48
Agrobacterium fabrum C58 0.26 Atu1100 hypothetical protein 0.55 Atu4544 4-hydroxybenzoate 3-monooxygenase low > 89
Rhodopseudomonas palustris CGA009 0.26 TX73_015880 YicC family protein 0.62 TX73_009160 4-hydroxybenzoate 3-monooxygenase low > 86
Sinorhizobium meliloti 1021 0.25 SMc00576 hypothetical protein 0.58 SM_b20583 4-hydroxybenzoate 3-monooxygenase low > 103
Rhizobium sp. OAE497 0.24 ABIE40_RS06380 YicC/YloC family endoribonuclease 0.57 ABIE40_RS19575 4-hydroxybenzoate 3-monooxygenase low > 107
Azospirillum sp. SherDot2 0.23 MPMX19_00983 hypothetical protein 0.46 MPMX19_05529 4-hydroxybenzoate 3-monooxygenase (NAD(P)H) — —
Caulobacter crescentus NA1000 0.19 CCNA_01752 YicC-family protein 0.54 CCNA_02487 4-hydroxybenzoate 3-monooxygenase low > 66
Caulobacter crescentus NA1000 Δfur 0.19 CCNA_01752 YicC-family protein 0.54 CCNA_02487 4-hydroxybenzoate 3-monooxygenase low > 67

Not shown: 55 genomes with orthologs for Xcc-8004.1220.1 only; 1 genomes with orthologs for Xcc-8004.466.1 only