Conservation of cofitness between Xcc-8004.4065.1 and Xcc-8004.2182.1 in Xanthomonas campestris pv. campestris strain 8004

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) 1.0 Xcc-8004.2182.1 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form 0.60 1
Lysobacter sp. OAE881 0.73 ABIE51_RS14235 exopolyphosphatase 0.68 ABIE51_RS09105 NAD-glutamate dehydrogenase domain-containing protein 0.45 44
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_03775 ppx exopolyphosphatase 0.54 OKGIIK_09160 gdh2 NAD-specific glutamate dehydrogenase low > 52
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS15015 Ppx/GppA family phosphatase 0.54 LRK54_RS02090 NAD-glutamate dehydrogenase low > 59
Rhodanobacter denitrificans MT42 0.54 LRK55_RS14730 Ppx/GppA phosphatase family protein 0.54 LRK55_RS01865 NAD-glutamate dehydrogenase low > 63
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS00705 Ppx/GppA phosphatase family protein 0.55 ABZR86_RS07560 NAD-glutamate dehydrogenase domain-containing protein low > 74
Pseudomonas putida KT2440 0.41 PP_5216 exopolyphosphatase 0.39 PP_2080 NAD-specific glutamate dehydrogenase low > 96
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_875 Exopolyphosphatase (EC 3.6.1.11) 0.39 PfGW456L13_3298 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 87
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_2209 Exopolyphosphatase (EC 3.6.1.11) 0.38 Pf1N1B4_4643 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 87
Pseudomonas stutzeri RCH2 0.40 Psest_3731 exopolyphosphatase 0.39 Psest_1944 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) low > 67
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0294 Exopolyphosphatase 0.38 Psyr_1724 glutamate dehydrogenase (NAD) low > 86
Pseudomonas fluorescens SBW25 0.40 PFLU_RS29090 exopolyphosphatase 0.38 PFLU_RS17095 NAD-glutamate dehydrogenase low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0294 Exopolyphosphatase 0.38 Psyr_1724 glutamate dehydrogenase (NAD) low > 86
Pseudomonas sp. S08-1 0.40 OH686_11275 Exopolyphosphatase 0.39 OH686_22265 NAD-specific glutamate dehydrogenase , large form low > 80
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS29090 exopolyphosphatase 0.38 PFLU_RS17095 NAD-glutamate dehydrogenase low > 109
Pseudomonas sp. RS175 0.40 PFR28_04344 Exopolyphosphatase 0.38 PFR28_01602 NAD-specific glutamate dehydrogenase low > 88
Pseudomonas simiae WCS417 0.40 PS417_27425 exopolyphosphatase 0.39 PS417_15075 NAD-glutamate dehydrogenase low > 88
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_12900 exopolyphosphatase 0.38 AO356_24705 NAD-glutamate dehydrogenase low > 104
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_08880 exopolyphosphatase 0.38 AO353_22820 NAD-glutamate dehydrogenase low > 101
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4454 Exopolyphosphatase (EC 3.6.1.11) 0.38 Pf6N2E2_634 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form low > 103
Marinobacter adhaerens HP15 0.36 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.38 HP15_2269 NAD-specific glutamate dehydrogenase low > 73
Alteromonas macleodii MIT1002 0.33 MIT1002_00871 Exopolyphosphatase 0.40 MIT1002_02034 NAD-specific glutamate dehydrogenase low > 70
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_03775 exopolyphosphatase 0.39 CSW01_07495 NAD-glutamate dehydrogenase low > 62
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04419 Ppx/GppA phosphatase 0.39 H281DRAFT_03183 glutamate dehydrogenase (NAD) low > 103
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS14105 exopolyphosphatase 0.39 BPHYT_RS22475 NAD-glutamate dehydrogenase low > 109
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS04855 exopolyphosphatase 0.39 QEN71_RS20065 NAD-glutamate dehydrogenase low > 153
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS13430 exopolyphosphatase 0.39 RR42_RS07270 NAD-glutamate dehydrogenase low > 128
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_2313 Exopolyphosphatase 0.40 B158DRAFT_0998 NAD-specific glutamate dehydrogenase low > 40
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS14060 exopolyphosphatase 0.40 ABZR87_RS22605 NAD-glutamate dehydrogenase low > 80
Ralstonia solanacearum UW163 0.31 UW163_RS15420 exopolyphosphatase 0.40 UW163_RS18785 NAD-glutamate dehydrogenase — —
Ralstonia solanacearum PSI07 0.31 RPSI07_RS15335 exopolyphosphatase 0.39 RPSI07_RS18780 NAD-glutamate dehydrogenase low > 81
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS02110 exopolyphosphatase 0.40 RALBFv3_RS20390 NAD-glutamate dehydrogenase low > 76
Shewanella oneidensis MR-1 0.27 SO2185 ppx exopolyphosphatase (NCBI ptt file) 0.40 SO2593 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.27 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) 0.40 Sama_1592 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.26 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) 0.40 Shewana3_1785 glutamate dehydrogenase (NAD) (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_3078 Ppx/GppA phosphatase (RefSeq) 0.40 Shew_1809 NAD-glutamate dehydrogenase (RefSeq) low > 60
Bosea sp. OAE506 0.07 ABIE41_RS16120 exopolyphosphatase 0.33 ABIE41_RS04780 NAD-glutamate dehydrogenase low > 77

Not shown: 36 genomes with orthologs for Xcc-8004.4065.1 only; 13 genomes with orthologs for Xcc-8004.2182.1 only