Conservation of cofitness between TX73_006245 and TX73_006010 in Rhodopseudomonas palustris CGA009

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_006245 ABC transporter permease 1.0 TX73_006010 excinuclease ABC subunit UvrC 0.69 4
Variovorax sp. SCN45 0.62 GFF6642 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) 0.29 GFF2859 Excinuclease ABC subunit C low > 127
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS30250 peptide ABC transporter 0.30 RR42_RS14000 excinuclease ABC subunit C low > 128
Rhodospirillum rubrum S1H 0.60 Rru_A0980 Binding-protein-dependent transport systems inner membrane component (NCBI) 0.49 Rru_A2220 Excinuclease ABC, C subunit (NCBI) low > 58
Acidovorax sp. GW101-3H11 0.48 Ac3H11_697 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) 0.28 Ac3H11_373 Excinuclease ABC subunit C low > 79
Rhizobium sp. OAE497 0.47 ABIE40_RS26090 ABC transporter permease 0.57 ABIE40_RS06500 excinuclease ABC subunit UvrC — —
Agrobacterium fabrum C58 0.47 Atu3268 dipeptide ABC transporter permease 0.57 Atu1129 excinuclease ABC chain C low > 89
Variovorax sp. OAS795 0.47 ABID97_RS22885 ABC transporter permease 0.30 ABID97_RS10635 excinuclease ABC subunit UvrC low > 91
Rahnella sp. WP5 0.46 EX31_RS18730 glutathione ABC transporter permease GsiC 0.30 EX31_RS24150 excinuclease ABC subunit UvrC low > 89
Escherichia coli ECRC100 0.46 OKFHMN_06090 gsiC glutathione ABC transporter permease GsiC 0.31 OKFHMN_25825 uvrC excinuclease ABC subunit UvrC low > 80
Escherichia coli BL21 0.46 ECD_00798 glutathione ABC transporter permease 0.31 ECD_01878 excinuclease UvrABC, endonuclease subunit low > 61
Escherichia coli BW25113 0.46 b0831 yliC predicted peptide transporter subunit: membrane component of ABC superfamily (NCBI) 0.31 b1913 uvrC excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) low > 76
Escherichia coli ECRC62 0.46 BNILDI_20725 gsiC glutathione ABC transporter permease GsiC 0.31 BNILDI_15235 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli ECOR27 0.46 NOLOHH_22450 gsiC glutathione ABC transporter permease GsiC 0.31 NOLOHH_16445 uvrC excinuclease ABC subunit UvrC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02881 Glutathione transport system permease protein GsiC 0.31 OHPLBJKB_01816 UvrABC system protein C low > 73
Escherichia coli ECRC99 0.46 KEDOAH_21820 gsiC glutathione ABC transporter permease GsiC 0.31 KEDOAH_02265 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli ECRC98 0.46 JDDGAC_09725 gsiC glutathione ABC transporter permease GsiC 0.31 JDDGAC_00415 uvrC excinuclease ABC subunit UvrC low > 86
Escherichia coli ECRC101 0.46 MCAODC_25305 gsiC glutathione ABC transporter permease GsiC 0.31 MCAODC_19565 uvrC excinuclease ABC subunit UvrC low > 87
Escherichia coli ECRC102 0.46 NIAGMN_04135 gsiC glutathione ABC transporter permease GsiC 0.31 NIAGMN_02225 uvrC excinuclease ABC subunit UvrC — —
Escherichia coli Nissle 1917 0.46 ECOLIN_RS04420 glutathione ABC transporter permease GsiC 0.31 ECOLIN_RS10895 excinuclease ABC subunit UvrC low > 55
Enterobacter sp. TBS_079 0.45 MPMX20_01471 Glutathione transport system permease protein GsiC 0.30 MPMX20_02838 UvrABC system protein C low > 85
Escherichia fergusonii Becca 0.45 EFB2_03275 Glutathione transport system permease protein GsiC 0.31 EFB2_02033 UvrABC system protein C low > 86
Escherichia coli ECOR38 0.45 HEPCGN_01940 gsiC glutathione ABC transporter permease GsiC 0.31 HEPCGN_04180 uvrC excinuclease ABC subunit UvrC 0.61 6
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.45 GFF729 Dipeptide transport system permease protein DppB in protein degradation cluster 0.30 GFF1700 Excinuclease ABC subunit C low > 78
Klebsiella michiganensis M5al 0.45 BWI76_RS09105 glutathione ABC transporter permease GsiC 0.31 BWI76_RS18330 excinuclease ABC subunit C low > 92
Enterobacter asburiae PDN3 0.45 EX28DRAFT_2133 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 0.30 EX28DRAFT_0634 Excinuclease ABC subunit C low > 76
Azospirillum sp. SherDot2 0.44 MPMX19_04021 Dipeptide transport system permease protein DppB 0.50 MPMX19_01070 UvrABC system protein C low > 112
Pectobacterium carotovorum WPP14 0.44 HER17_RS13500 glutathione ABC transporter permease GsiC 0.30 HER17_RS07715 excinuclease ABC subunit UvrC low > 75
Erwinia tracheiphila SCR3 0.44 LU632_RS09565 gsiC glutathione ABC transporter permease GsiC 0.30 LU632_RS10195 uvrC excinuclease ABC subunit UvrC low > 74
Ralstonia solanacearum GMI1000 0.43 RS_RS06925 glutathione ABC transporter permease GsiC 0.29 RS_RS05305 excinuclease ABC subunit UvrC low > 80
Ralstonia solanacearum PSI07 0.43 RPSI07_RS17230 glutathione ABC transporter permease GsiC 0.29 RPSI07_RS18935 excinuclease ABC subunit UvrC low > 81
Pantoea sp. MT58 0.43 IAI47_13120 glutathione ABC transporter permease GsiC 0.29 IAI47_12465 excinuclease ABC subunit UvrC low > 76
Ralstonia sp. UNC404CL21Col 0.43 ABZR87_RS11715 glutathione ABC transporter permease GsiC 0.30 ABZR87_RS10245 excinuclease ABC subunit UvrC low > 80
Serratia liquefaciens MT49 0.43 IAI46_07855 glutathione ABC transporter permease GsiC 0.30 IAI46_09210 excinuclease ABC subunit UvrC low > 86
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS00250 glutathione ABC transporter permease GsiC 0.29 RALBFv3_RS14525 excinuclease ABC subunit UvrC low > 76
Ralstonia solanacearum UW163 0.43 UW163_RS13580 glutathione ABC transporter permease GsiC 0.29 UW163_RS11990 excinuclease ABC subunit UvrC — —
Sinorhizobium meliloti 1021 0.42 SMc03754 peptide transport system permease ABC transporter protein 0.57 SMc00602 excinuclease ABC subunit C low > 103
Dickeya dadantii 3937 0.41 DDA3937_RS20575 ABC transporter permease subunit 0.30 DDA3937_RS13700 excinuclease ABC subunit UvrC low > 74
Pseudomonas putida KT2440 0.41 PP_4455 glutathione ABC transporter permease subunit 0.34 PP_4098 UvrABC system protein C low > 96
Dickeya dianthicola 67-19 0.41 HGI48_RS00640 ABC transporter permease subunit 0.31 HGI48_RS13795 excinuclease ABC subunit UvrC 0.45 40
Pseudomonas syringae pv. syringae B728a ΔmexB 0.41 Psyr_2679 Binding-protein-dependent transport systems inner membrane component 0.33 Psyr_2896 Excinuclease ABC subunit C low > 86
Pseudomonas simiae WCS417 0.41 PS417_11135 peptide ABC transporter 0.33 PS417_10725 excinuclease ABC subunit C — —
Dickeya dianthicola ME23 0.41 DZA65_RS00695 ABC transporter permease subunit 0.30 DZA65_RS14285 excinuclease ABC subunit UvrC low > 75
Pseudomonas syringae pv. syringae B728a 0.41 Psyr_2679 Binding-protein-dependent transport systems inner membrane component 0.33 Psyr_2896 Excinuclease ABC subunit C low > 86
Fusobacterium nucleatum SB010 0.40 HUW76_03520 ABC transporter permease 0.21 HUW76_06695 excinuclease ABC subunit UvrC low > 35
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_25860 peptide ABC transporter 0.33 AO353_21835 excinuclease ABC subunit C low > 101
Herbaspirillum seropedicae SmR1 0.40 HSERO_RS15950 ABC transporter permease 0.31 HSERO_RS09690 excinuclease ABC subunit C low > 78
Castellaniella sp019104865 MT123 0.40 ABCV34_RS13520 glutathione ABC transporter permease GsiC 0.30 ABCV34_RS06980 excinuclease ABC subunit UvrC low > 48
Phaeobacter inhibens DSM 17395 0.40 PGA1_c32080 glutathione transport system permease protein GsiC 0.50 PGA1_c02880 uvrABC system protein C low > 62
Dinoroseobacter shibae DFL-12 0.36 Dshi_0881 binding-protein-dependent transport systems inner membrane component (RefSeq) 0.51 Dshi_0644 excinuclease ABC, C subunit (RefSeq) low > 64
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_05550 oligopeptide ABC transporter permease OppB 0.31 CSW01_06140 excinuclease ABC subunit C low > 62
Marinobacter adhaerens HP15 0.35 HP15_2806 permease protein, ABC-type oligopeptide transporter 0.31 HP15_1568 excinuclease ABC subunit C low > 73
Hydrogenophaga sp. GW460-11-11-14-LB1 0.34 GFF1370 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) 0.29 GFF3847 Excinuclease ABC subunit C — —
Magnetospirillum magneticum AMB-1 0.33 AMB_RS09975 ABC transporter permease 0.50 AMB_RS19240 UvrABC system protein C low > 64
Mucilaginibacter yixingensis YX-36 DSM 26809 0.31 ABZR88_RS19860 ABC transporter permease 0.20 ABZR88_RS04150 excinuclease ABC subunit UvrC low > 71
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS25300 ABC transporter permease 0.19 CA265_RS18110 excinuclease ABC subunit C low > 88
Mycobacterium tuberculosis H37Rv 0.30 Rv3665c Probable dipeptide-transport integral membrane protein ABC transporter DppB 0.23 Rv1420 Probable excinuclease ABC (subunit C-nuclease) UvrC — —
Alteromonas macleodii MIT1002 0.25 MIT1002_02935 Glutathione transport system permease protein GsiC 0.31 MIT1002_02153 Excinuclease ABC subunit C low > 70

Not shown: 5 genomes with orthologs for TX73_006245 only; 37 genomes with orthologs for TX73_006010 only