Conservation of cofitness between SMc04385 and SMc01275 in Sinorhizobium meliloti 1021

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc04385 L-2-aminoadipate semialdehyde dehydrogenase (EC 1.2.1.31) (from data) 1.0 SMc01275 ribosomal large subunit pseudouridine synthase C protein 0.58 12
Agrobacterium fabrum C58 0.86 Atu4153 aldehyde dehydrogenase 0.81 Atu1471 ribosomal large subunit pseudouridine synthase C — —
Rhizobium sp. OAE497 0.85 ABIE40_RS21030 aldehyde dehydrogenase family protein 0.81 ABIE40_RS09915 RluA family pseudouridine synthase low > 107
Variovorax sp. SCN45 0.72 GFF5027 Aldehyde dehydrogenase B (EC 1.2.1.22) 0.26 GFF3847 LSU rRNA pseudouridine(955/2504/2580) synthase (EC 5.4.99.24) low > 127
Variovorax sp. OAS795 0.72 ABID97_RS04070 aldehyde dehydrogenase family protein 0.25 ABID97_RS08250 RluA family pseudouridine synthase low > 91
Acidovorax sp. GW101-3H11 0.71 Ac3H11_1605 Aldehyde dehydrogenase B (EC 1.2.1.22) 0.26 Ac3H11_1590 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 79
Castellaniella sp019104865 MT123 0.70 ABCV34_RS09135 aldehyde dehydrogenase family protein 0.24 ABCV34_RS08415 RluA family pseudouridine synthase low > 48
Pseudomonas putida KT2440 0.68 PP_5258 L-piperidine-6-carboxylate dehydrogenase 0.26 PP_1906 ribosomal large subunit pseudouridine synthase C low > 96
Rhodospirillum rubrum S1H 0.67 Rru_A0285 Aldehyde dehydrogenase (NCBI) 0.42 Rru_A2659 Pseudouridine synthase, RluD (NCBI) — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_127 L-pipecolate dehydrogenase (EC 1.5.99.3) 0.25 PfGW456L13_2097 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 87
Pseudomonas syringae pv. syringae B728a ΔmexB 0.67 Psyr_3514 delta-1-piperideine-6-carboxylate dehydrogenase 0.26 Psyr_1639 ribosomal large subunit pseudouridine synthase C low > 86
Pseudomonas syringae pv. syringae B728a 0.67 Psyr_3514 delta-1-piperideine-6-carboxylate dehydrogenase 0.26 Psyr_1639 ribosomal large subunit pseudouridine synthase C low > 86
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_1384 L-pipecolate dehydrogenase (EC 1.5.99.3) 0.25 Pf1N1B4_459 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) — —
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_13330 aldehyde dehydrogenase 0.25 AO353_01405 23S rRNA pseudouridylate synthase low > 101
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_08510 aldehyde dehydrogenase 0.25 AO356_20125 23S rRNA pseudouridylate synthase low > 104
Pseudomonas simiae WCS417 0.67 PS417_02645 aldehyde dehydrogenase 0.26 PS417_21480 23S rRNA pseudouridylate synthase low > 88
Azospirillum sp. SherDot2 0.66 MPMX19_05045 Succinate-semialdehyde dehydrogenase [NADP(+)] 0.43 MPMX19_01718 Ribosomal large subunit pseudouridine synthase C low > 112
Pseudomonas fluorescens FW300-N2E2 0.66 Pf6N2E2_3582 L-pipecolate dehydrogenase (EC 1.5.99.3) 0.25 Pf6N2E2_5944 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 103
Pseudomonas sp. RS175 0.66 PFR28_05151 Succinate-semialdehyde dehydrogenase [NADP(+)] 0.26 PFR28_03018 Ribosomal large subunit pseudouridine synthase C low > 88
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS02715 aldehyde dehydrogenase family protein 0.25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 109
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS14810 aldehyde dehydrogenase family protein 0.22 QEN71_RS04500 RluA family pseudouridine synthase low > 153
Pseudomonas fluorescens SBW25 0.66 PFLU_RS02715 aldehyde dehydrogenase family protein 0.25 PFLU_RS23095 23S rRNA pseudouridine(955/2504/2580) synthase RluC low > 109
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_01833 aldehyde dehydrogenase (NAD+) 0.22 H281DRAFT_04340 23S rRNA pseudouridine955/2504/2580 synthase low > 103
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS22495 aldehyde dehydrogenase family protein 0.24 ABZR87_RS10090 RluA family pseudouridine synthase low > 80
Ralstonia solanacearum PSI07 0.65 RPSI07_RS23165 aldehyde dehydrogenase family protein 0.22 RPSI07_RS19085 RluA family pseudouridine synthase low > 81
Azospirillum brasilense Sp245 0.65 AZOBR_RS32620 aldehyde dehydrogenase 0.44 AZOBR_RS06905 pseudouridine synthase low > 97
Burkholderia phytofirmans PsJN 0.65 BPHYT_RS32650 aldehyde dehydrogenase 0.22 BPHYT_RS14480 ribosomal large subunit pseudouridine synthase C low > 109
Ralstonia solanacearum GMI1000 0.65 RS_RS00795 aldehyde dehydrogenase family protein 0.23 RS_RS05155 RluA family pseudouridine synthase low > 80
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS10180 aldehyde dehydrogenase family protein 0.23 RALBFv3_RS14375 RluA family pseudouridine synthase low > 76
Ralstonia solanacearum UW163 0.64 UW163_RS03400 aldehyde dehydrogenase family protein 0.23 UW163_RS11840 RluA family pseudouridine synthase — —
Caulobacter crescentus NA1000 Δfur 0.61 CCNA_01274 piperideine-6-carboxylate dehydrogenase 0.39 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 67
Caulobacter crescentus NA1000 0.61 CCNA_01274 piperideine-6-carboxylate dehydrogenase 0.39 CCNA_02059 ribosomal large subunit pseudouridine synthase C low > 66
Cupriavidus basilensis FW507-4G11 0.56 RR42_RS18500 aldehyde dehydrogenase 0.23 RR42_RS14155 pseudouridine synthase low > 128
Lysobacter sp. OAE881 0.52 ABIE51_RS13720 aldehyde dehydrogenase family protein 0.24 ABIE51_RS11800 RluA family pseudouridine synthase low > 62
Dyella japonica UNC79MFTsu3.2 0.50 ABZR86_RS07440 aldehyde dehydrogenase family protein 0.26 ABZR86_RS02725 RluA family pseudouridine synthase — —
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.3029.1 Aldehyde dehydrogenase B (EC 1.2.1.22) 0.24 Xcc-8004.2616.1 Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) low > 74
Rhodanobacter denitrificans MT42 0.50 LRK55_RS15720 aldehyde dehydrogenase family protein 0.28 LRK55_RS17750 RluA family pseudouridine synthase low > 63
Rhodanobacter denitrificans FW104-10B01 0.50 LRK54_RS15965 aldehyde dehydrogenase family protein 0.28 LRK54_RS17895 RluA family pseudouridine synthase — —
Rhodanobacter sp. FW510-T8 0.50 OKGIIK_09020 adhE aldehyde dehydrogenase family protein 0.28 OKGIIK_07405 rluA 23S rRNA pseudouridine(955/2504/2580) synthase 0.70 34
Kangiella aquimarina DSM 16071 0.50 B158DRAFT_1805 NAD-dependent aldehyde dehydrogenases 0.26 B158DRAFT_1770 ribosomal large subunit pseudouridine synthase C (EC 5.4.99.24) low > 40

Not shown: 5 genomes with orthologs for SMc04385 only; 44 genomes with orthologs for SMc01275 only