Conservation of cofitness between Rv3092c and Rv1112 in Mycobacterium tuberculosis H37Rv

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Mycobacterium tuberculosis H37Rv 1.0 Rv3092c Probable conserved integral membrane protein 1.0 Rv1112 Probable GTP binding protein 0.20 29
Brevundimonas sp. GW460-12-10-14-LB2 0.46 A4249_RS02430 DUF808 domain-containing protein 0.50 A4249_RS09035 redox-regulated ATPase YchF low > 48
Sphingomonas koreensis DSMZ 15582 0.44 Ga0059261_0099 Uncharacterized protein conserved in bacteria 0.45 Ga0059261_3227 GTP-binding protein YchF low > 68
Bosea sp. OAE506 0.42 ABIE41_RS07790 DUF808 domain-containing protein 0.48 ABIE41_RS11295 redox-regulated ATPase YchF
Phaeobacter inhibens DSM 17395 0.36 PGA1_c17240 Uncharacterized protein conserved in bacteria 0.50 PGA1_c04950 GTP-dependent nucleic acid-binding protein EngD low > 62
Dinoroseobacter shibae DFL-12 0.36 Dshi_1739 protein of unknown function DUF808 (RefSeq) 0.51 Dshi_0954 GTP-binding protein YchF (RefSeq)
Caulobacter crescentus NA1000 Δfur 0.34 CCNA_01502 conserved membrane spanning protein 0.51 CCNA_00512 GTP-binding protein, probable translation factor low > 67
Caulobacter crescentus NA1000 0.34 CCNA_01502 conserved membrane spanning protein 0.51 CCNA_00512 GTP-binding protein, probable translation factor low > 66
Pontibacter actiniarum KMM 6156, DSM 19842 0.33 CA264_03720 ABC transporter 0.46 CA264_07495 GTP-binding protein YchF low > 74
Pantoea sp. MT58 0.32 IAI47_07925 DUF808 family protein 0.49 IAI47_11310 redox-regulated ATPase YchF low > 76
Pseudomonas fluorescens SBW25 0.32 PFLU_RS08885 DUF808 domain-containing protein 0.47 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Pseudomonas simiae WCS417 0.32 PS417_08830 membrane protein 0.47 PS417_03560 GTP-binding protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS08885 DUF808 domain-containing protein 0.47 PFLU_RS03610 redox-regulated ATPase YchF low > 109
Azospirillum brasilense Sp245 0.32 AZOBR_RS23860 ABC transporter 0.50 AZOBR_RS30645 GTP-binding protein YchF
Klebsiella michiganensis M5al 0.32 BWI76_RS18405 hypothetical protein 0.48 BWI76_RS17485 GTP-binding protein YchF
Shewanella amazonensis SB2B 0.32 Sama_2735 hypothetical protein (RefSeq) 0.50 Sama_2571 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 62
Acinetobacter radioresistens SK82 0.32 MPMX26_00757 Inner membrane protein YedI 0.50 MPMX26_01861 Ribosome-binding ATPase YchF low > 36
Shewanella sp. ANA-3 0.31 Shewana3_0979 hypothetical protein (RefSeq) 0.50 Shewana3_1012 GTP-dependent nucleic acid-binding protein EngD (RefSeq) low > 73
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_1803 Protein of unknown function DUF808 0.47 Psyr_0941 Conserved hypothetical protein 92
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_1803 Protein of unknown function DUF808 0.47 Psyr_0941 Conserved hypothetical protein 92 low > 86
Shewanella oneidensis MR-1 0.31 SO1151 conserved hypothetical protein (NCBI ptt file) 0.50 SO1185 conserved hypothetical protein TIGR00092 (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.31 MPMX20_02954 Inner membrane protein YedI 0.48 MPMX20_02645 Ribosome-binding ATPase YchF low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF3999 Putative inner membrane protein 0.49 GFF2784 GTP-binding and nucleic acid-binding protein YchF low > 78
Pseudomonas stutzeri RCH2 0.31 Psest_1878 Uncharacterized protein conserved in bacteria 0.47 Psest_1103 GTP-binding protein YchF low > 67
Escherichia coli ECRC99 0.31 KEDOAH_02480 yedI Inner membrane protein YedI 0.50 KEDOAH_25405 ychF redox-regulated ATPase YchF
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01770 Inner membrane protein YedI 0.50 OHPLBJKB_02484 Ribosome-binding ATPase YchF low > 73
Escherichia coli ECRC62 0.31 BNILDI_15035 yedI Inner membrane protein YedI 0.50 BNILDI_18805 ychF redox-regulated ATPase YchF low > 75
Escherichia fergusonii Becca 0.31 EFB2_01989 Inner membrane protein YedI 0.50 EFB2_02724 Ribosome-binding ATPase YchF low > 86
Escherichia coli Nissle 1917 0.31 ECOLIN_RS11135 DUF808 domain-containing protein 0.50 ECOLIN_RS07280 redox-regulated ATPase YchF low > 55
Escherichia coli BW25113 0.31 b1958 yedI conserved inner membrane protein (NCBI) 0.50 b1203 ychF translation-associated GTPase (NCBI)
Escherichia coli ECRC98 0.31 JDDGAC_00200 yedI Inner membrane protein YedI 0.50 JDDGAC_06165 ychF redox-regulated ATPase YchF low > 86
Escherichia coli ECOR27 0.31 NOLOHH_16245 yedI Inner membrane protein YedI 0.50 NOLOHH_20650 ychF redox-regulated ATPase YchF
Escherichia coli ECRC101 0.31 MCAODC_19780 yedI Inner membrane protein YedI 0.50 MCAODC_21850 ychF redox-regulated ATPase YchF low > 87
Escherichia coli ECRC102 0.31 NIAGMN_02440 yedI Inner membrane protein YedI 0.50 NIAGMN_27825 ychF redox-regulated ATPase YchF
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0596 Uncharacterized protein conserved in bacteria 0.48 EX28DRAFT_0821 GTP-binding protein YchF
Escherichia coli ECRC100 0.31 OKFHMN_25615 yedI Inner membrane protein YedI 0.50 OKFHMN_28410 ychF redox-regulated ATPase YchF
Escherichia coli ECOR38 0.31 HEPCGN_03975 yedI Inner membrane protein YedI 0.50 HEPCGN_24875 ychF redox-regulated ATPase YchF low > 87
Shewanella loihica PV-4 0.31 Shew_0826 hypothetical protein (RefSeq) 0.48 Shew_2919 translation-associated GTPase (RefSeq) low > 60
Pseudomonas sp. S08-1 0.31 OH686_13580 Inner membrane protein YedI 0.47 OH686_07965 GTP-binding and nucleic acid-binding protein YchF low > 80
Pseudomonas sp. RS175 0.31 PFR28_03107 Inner membrane protein YedI 0.47 PFR28_03664 Ribosome-binding ATPase YchF low > 88
Variovorax sp. SCN45 0.30 GFF7044 Inner membrane protein YedI 0.50 GFF2141 GTP-binding and nucleic acid-binding protein YchF low > 127
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_4283 Membrane protein, putative 0.48 PfGW456L13_1574 GTP-binding and nucleic acid-binding protein YchF low > 87
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_3666 Membrane protein, putative 0.48 Pf1N1B4_2912 GTP-binding and nucleic acid-binding protein YchF
Variovorax sp. OAS795 0.30 ABID97_RS21015 DUF808 domain-containing protein 0.49 ABID97_RS24750 redox-regulated ATPase YchF
Pseudomonas putida KT2440 0.30 PP_4294 conserved inner membrane protein 0.47 PP_0719 ribosome-associated potassium-dependent informational ATP/GTPase low > 96
Rahnella sp. WP5 0.30 EX31_RS21945 DUF808 domain-containing protein 0.48 EX31_RS07380 redox-regulated ATPase YchF low > 89
Pseudomonas fluorescens FW300-N2C3 0.29 AO356_19640 hypothetical protein 0.47 AO356_16450 GTP-binding protein 0.22 92
Pseudomonas fluorescens FW300-N2E3 0.29 AO353_01900 hypothetical protein 0.46 AO353_14740 GTP-binding protein low > 101
Hydrogenophaga sp. GW460-11-11-14-LB1 0.29 GFF4569 Membrane protein, putative 0.50 GFF630 GTP-binding and nucleic acid-binding protein YchF low > 90
Marinobacter adhaerens HP15 0.29 HP15_3200 membrane protein containing DUF808 0.52 HP15_704 translation-associated GTPase low > 73
Echinicola vietnamensis KMM 6221, DSM 17526 0.26 Echvi_3821 Uncharacterized protein conserved in bacteria 0.48 Echvi_2525 GTP-binding protein YchF low > 79
Xanthomonas campestris pv. campestris strain 8004 0.25 Xcc-8004.533.1 Membrane protein, putative 0.49 Xcc-8004.4168.1 GTP-binding and nucleic acid-binding protein YchF low > 74

Not shown: 1 genomes with orthologs for Rv3092c only; 49 genomes with orthologs for Rv1112 only