Conservation of cofitness between RR42_RS28960 and RR42_RS33090 in Cupriavidus basilensis FW507-4G11

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS28960 acyl-CoA hydrolase 1.0 RR42_RS33090 fumarate hydratase 0.34 7
Ralstonia solanacearum PSI07 0.83 RPSI07_RS00670 acyl-CoA thioesterase 0.58 RPSI07_RS05900 class II fumarate hydratase low > 81
Ralstonia solanacearum GMI1000 0.83 RS_RS18125 acyl-CoA thioesterase 0.58 RS_RS23320 class II fumarate hydratase low > 80
Pseudomonas fluorescens FW300-N2E3 0.75 AO353_10080 acyl-CoA hydrolase 0.56 AO353_02150 fumarate hydratase low > 101
Pseudomonas sp. SVBP6 0.73 COO64_RS01865 acyl-CoA thioesterase 0.56 COO64_RS06820 class II fumarate hydratase low > 93
Herbaspirillum seropedicae SmR1 0.72 HSERO_RS13415 VdlD 0.57 HSERO_RS07610 fumarate hydratase low > 78
Pseudomonas sp. DMC3 0.71 GFF516 hypothetical protein 0.56 GFF4693 Fumarate hydratase class II low > 89
Pseudomonas simiae WCS417 0.71 PS417_28260 VdlD 0.57 PS417_19200 fumarate hydratase low > 88
Dechlorosoma suillum PS 0.71 Dsui_0310 acyl-CoA hydrolase 0.54 Dsui_0926 fumarate hydratase, class II low > 51
Pseudomonas stutzeri RCH2 0.71 Psest_0771 Acyl-CoA hydrolase 0.55 Psest_2682 fumarate hydratase, class II low > 67
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_719 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.56 PfGW456L13_2160 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_2001 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.56 Pf1N1B4_367 Fumarate hydratase class II (EC 4.2.1.2) low > 87
Pseudomonas lactucae CFBP13502 0.70 GEMAOFIL_00120 hypothetical protein 0.57 GEMAOFIL_04066 Fumarate hydratase class II low > 93
Pseudomonas fluorescens SBW25 0.70 PFLU_RS29920 acyl-CoA thioesterase 0.56 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS29920 acyl-CoA thioesterase 0.56 PFLU_RS21170 class II fumarate hydratase low > 109
Pseudomonas fluorescens FW300-N2C3 0.70 AO356_11970 acyl-CoA hydrolase 0.56 AO356_03545 fumarate hydratase — —
Pseudomonas sp. RS175 0.70 PFR28_04527 hypothetical protein 0.56 PFR28_00889 Fumarate hydratase class II low > 88
Pseudomonas syringae pv. syringae B728a 0.70 Psyr_5069 Thioesterase superfamily 0.59 Psyr_3661 Fumarate hydratase, class II low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.70 Psyr_5069 Thioesterase superfamily 0.59 Psyr_3661 Fumarate hydratase, class II low > 86
Acidovorax sp. GW101-3H11 0.69 Ac3H11_3244 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.57 Ac3H11_943 Fumarate hydratase class II (EC 4.2.1.2) low > 79
Pseudomonas fluorescens FW300-N2E2 0.68 Pf6N2E2_4269 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.56 Pf6N2E2_2536 Fumarate hydratase class II (EC 4.2.1.2) low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.68 GFF2680 cytosolic long-chain acyl-CoA thioester hydrolase family protein 0.57 GFF4101 Fumarate hydratase class II (EC 4.2.1.2) low > 90
Pseudomonas putida KT2440 0.64 PP_5356 Protein VdlD 0.56 PP_1755 fumarate hydratase (class 2) low > 96
Pseudomonas sp. BP01 0.64 JOY50_RS08715 acyl-CoA thioesterase 0.55 JOY50_RS16210 class II fumarate hydratase low > 84
Acinetobacter radioresistens SK82 0.64 MPMX26_02367 hypothetical protein 0.59 MPMX26_01446 Fumarate hydratase class II low > 36
Acinetobacter baumannii LAC-4 0.62 RR41_RS08595 acyl-CoA thioesterase 0.58 RR41_RS07970 class II fumarate hydratase low > 55
Sinorhizobium meliloti 1021 0.60 SM_b21634 acyl-CoA thioester hydrolase 0.57 SMc00149 fumarate hydratase — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.48 ABZR88_RS06780 acyl-CoA thioesterase 0.53 ABZR88_RS20230 class II fumarate hydratase — —
Dyella japonica UNC79MFTsu3.2 0.36 ABZR86_RS22000 acyl-CoA thioesterase 0.43 ABZR86_RS05855 class II fumarate hydratase low > 74
Paraburkholderia graminis OAS925 0.35 ABIE53_003085 acyl-CoA hydrolase 0.60 ABIE53_003084 fumarate hydratase class II low > 113
Paraburkholderia sabiae LMG 24235 0.35 QEN71_RS04355 acyl-CoA thioesterase 0.56 QEN71_RS04360 class II fumarate hydratase low > 153
Shewanella loihica PV-4 0.34 Shew_1607 thioesterase superfamily protein (RefSeq) 0.36 Shew_0068 fumarate lyase (RefSeq) low > 60
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04313 Acyl-CoA hydrolase 0.60 H281DRAFT_04314 fumarase, class II low > 103
Burkholderia phytofirmans PsJN 0.34 BPHYT_RS14620 acyl-CoA hydrolase 0.58 BPHYT_RS14615 fumarate hydratase low > 109
Rhodanobacter sp000427505 FW510-R12 0.32 LRK53_RS06275 acyl-CoA thioesterase 0.42 LRK53_RS09230 class II fumarate hydratase low > 59
Pedobacter sp. GW460-11-11-14-LB5 0.31 CA265_RS15705 acyl-CoA thioesterase 0.54 CA265_RS23855 fumarate hydratase, class II — —
Rhodanobacter sp. FW510-T8 0.31 OKGIIK_10560 yciA acyl-CoA thioesterase 0.43 OKGIIK_06345 aspA aspartate ammonia-lyase low > 52
Rhodanobacter denitrificans FW104-10B01 0.30 LRK54_RS03670 acyl-CoA thioesterase 0.42 LRK54_RS00885 class II fumarate hydratase low > 59
Rhodanobacter denitrificans MT42 0.30 LRK55_RS03420 acyl-CoA thioesterase 0.42 LRK55_RS00660 class II fumarate hydratase 0.36 39
Vibrio cholerae E7946 ATCC 55056 0.30 CSW01_18835 acyl-CoA thioesterase 0.40 CSW01_07895 class II fumarate hydratase low > 62

Not shown: 8 genomes with orthologs for RR42_RS28960 only; 54 genomes with orthologs for RR42_RS33090 only