Conservation of cofitness between RR42_RS16995 and RR42_RS28675 in Cupriavidus basilensis FW507-4G11

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS16995 hypothetical protein 1.0 RR42_RS28675 MarR family transcriptional regulator 0.32 14
Dechlorosoma suillum PS 0.63 Dsui_1537 DNA repair protein radc 0.38 Dsui_2319 transcriptional regulator low > 51
Ralstonia sp. UNC404CL21Col 0.62 ABZR87_RS00330 DNA repair protein RadC 0.59 ABZR87_RS18365 helix-turn-helix domain-containing GNAT family N-acetyltransferase low > 80
Ralstonia solanacearum UW163 0.61 UW163_RS08960 JAB domain-containing protein 0.65 UW163_RS18320 MarR family transcriptional regulator — —
Ralstonia solanacearum IBSBF1503 0.61 RALBFv3_RS04710 JAB domain-containing protein 0.65 RALBFv3_RS16955 MarR family transcriptional regulator low > 76
Pseudomonas fluorescens GW456-L13 0.55 PfGW456L13_798 DNA repair protein RadC 0.20 PfGW456L13_3662 FIG01289214: hypothetical protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_12545 hypothetical protein 0.36 AO356_23535 MarR family transcriptional regulator low > 104
Herbaspirillum seropedicae SmR1 0.55 HSERO_RS05945 hypothetical protein 0.60 HSERO_RS23820 MarR family transcriptional regulator low > 78
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4377 DNA repair protein RadC 0.35 Pf6N2E2_1584 Transcriptional regulator, MarR family / Acetyltransferase (GNAT) low > 103
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS29445 JAB domain-containing protein 0.16 PFLU_RS16765 GNAT family N-acetyltransferase low > 109
Pseudomonas fluorescens SBW25 0.53 PFLU_RS29445 JAB domain-containing protein 0.16 PFLU_RS16765 GNAT family N-acetyltransferase low > 109
Pseudomonas simiae WCS417 0.53 PS417_27770 hypothetical protein 0.16 PS417_14770 MarR family transcriptional regulator low > 88
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF1170 DNA repair protein RadC 0.15 GFF4830 Histone acetyltransferase HPA2 and related acetyltransferases low > 90
Shewanella amazonensis SB2B 0.52 Sama_0327 radC DNA repair protein RadC (RefSeq) 0.13 Sama_2775 putative acetyltransferase (RefSeq) low > 62
Shewanella loihica PV-4 0.49 Shew_3481 DNA repair protein RadC (RefSeq) 0.14 Shew_0737 MarR family transcriptional regulator (RefSeq) low > 60
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS03085 DNA repair protein RadC 0.65 QEN71_RS31830 helix-turn-helix domain-containing GNAT family N-acetyltransferase low > 153
Paraburkholderia graminis OAS925 0.49 ABIE53_003289 DNA repair protein RadC 0.12 ABIE53_000687 DNA-binding MarR family transcriptional regulator/GNAT superfamily N-acetyltransferase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_04066 DNA replication and repair protein RadC 0.63 H281DRAFT_05555 transcriptional regulator, MarR family with acetyltransferase activity low > 103
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS15615 DNA repair protein RadC 0.38 ABZR86_RS01550 helix-turn-helix domain-containing GNAT family N-acetyltransferase low > 74
Shewanella sp. ANA-3 0.47 Shewana3_3770 radC DNA repair protein RadC (RefSeq) 0.13 Shewana3_3368 MarR family transcriptional regulator (RefSeq) low > 73
Shewanella oneidensis MR-1 0.47 SO4248 radC DNA repair protein RadC (NCBI ptt file) 0.12 SO0916 transcriptional regulator, MarR family (NCBI ptt file) low > 76
Rahnella sp. WP5 0.46 EX31_RS14470 JAB domain-containing protein 0.38 EX31_RS07420 bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase low > 89
Acidovorax sp. GW101-3H11 0.46 Ac3H11_1774 DNA repair protein RadC 0.16 Ac3H11_4122 Histone acetyltransferase HPA2 and related acetyltransferases low > 79
Variovorax sp. SCN45 0.46 GFF5700 UPF0758 family protein 0.18 GFF1033 Histone acetyltransferase HPA2 and related acetyltransferases low > 127
Variovorax sp. OAS795 0.46 ABID97_RS07700 DNA repair protein RadC 0.15 ABID97_RS14395 helix-turn-helix domain-containing GNAT family N-acetyltransferase 0.30 45
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS15625 hypothetical protein 0.14 BPHYT_RS02720 MarR family transcriptional regulator low > 109
Serratia liquefaciens MT49 0.43 IAI46_24825 DNA repair protein RadC 0.38 IAI46_12670 MarR family transcriptional regulator low > 86
Enterobacter asburiae PDN3 0.43 EX28DRAFT_3888 DNA repair protein radc 0.40 EX28DRAFT_0920 Transcriptional regulators low > 76
Klebsiella michiganensis M5al 0.41 BWI76_RS27365 hypothetical protein 0.37 BWI76_RS13810 MarR family transcriptional regulator low > 92
Phaeobacter inhibens DSM 17395 0.33 PGA1_c34550 DNA repair protein RadC 0.36 PGA1_c00210 Transcriptional regulators low > 62
Dinoroseobacter shibae DFL-12 0.31 Dshi_3569 DNA repair protein RadC (RefSeq) 0.18 Dshi_0779 transcriptional regulator, MarR family with acetyltransferase activity (RefSeq) 0.42 62
Bosea sp. OAE506 0.29 ABIE41_RS13815 DNA repair protein RadC 0.18 ABIE41_RS13565 bifunctional helix-turn-helix transcriptional regulator/GNAT family N-acetyltransferase low > 77
Rhodopseudomonas palustris CGA009 0.29 TX73_002000 DNA repair protein RadC 0.17 TX73_005300 helix-turn-helix domain-containing GNAT family N-acetyltransferase low > 86
Azospirillum brasilense Sp245 0.25 AZOBR_RS04400 DNA repair protein RadC 0.40 AZOBR_RS31915 MarR family transcriptional regulator 0.21 88

Not shown: 58 genomes with orthologs for RR42_RS16995 only; 3 genomes with orthologs for RR42_RS28675 only