Conservation of cofitness between RR42_RS35445 and RR42_RS19005 in Cupriavidus basilensis FW507-4G11

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS35445 ArsR family transcriptional regulator 1.0 RR42_RS19005 3-dehydroquinate synthase 0.45 11
Paraburkholderia bryophila 376MFSha3.1 0.73 H281DRAFT_02691 transcriptional regulator, ArsR family 0.73 H281DRAFT_05615 3-dehydroquinate synthase — —
Acidovorax sp. GW101-3H11 0.64 Ac3H11_2264 Transcriptional regulator, ArsR family 0.54 Ac3H11_4705 3-dehydroquinate synthase (EC 4.2.3.4) low > 79
Pseudomonas stutzeri RCH2 0.59 Psest_1782 Predicted transcriptional regulators 0.53 Psest_3713 3-dehydroquinate synthase — —
Variovorax sp. SCN45 0.58 GFF6927 Transcriptional regulator, ArsR family 0.58 GFF5325 3-dehydroquinate synthase (EC 4.2.3.4) low > 127
Serratia liquefaciens MT49 0.57 IAI46_09640 winged helix-turn-helix transcriptional regulator 0.48 IAI46_23700 3-dehydroquinate synthase low > 86
Pseudomonas fluorescens FW300-N1B4 0.57 Pf1N1B4_4483 Transcriptional regulator, ArsR family 0.57 Pf1N1B4_1537 3-dehydroquinate synthase (EC 4.2.3.4) — —
Pseudomonas fluorescens GW456-L13 0.57 PfGW456L13_3537 Transcriptional regulator, ArsR family 0.58 PfGW456L13_275 3-dehydroquinate synthase (EC 4.2.3.4) low > 87
Pseudomonas fluorescens FW300-N2E3 0.57 AO353_26620 ArsR family transcriptional regulator 0.56 AO353_12505 3-dehydroquinate synthase — —
Pseudomonas simiae WCS417 0.56 PS417_17530 ArsR family transcriptional regulator 0.57 PS417_01985 3-dehydroquinate synthase — —
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS14035 metalloregulator ArsR/SmtB family transcription factor 0.83 ABZR87_RS02590 3-dehydroquinate synthase low > 80
Ralstonia solanacearum IBSBF1503 0.53 RALBFv3_RS02060 transcriptional regulator 0.83 RALBFv3_RS06935 3-dehydroquinate synthase — —
Ralstonia solanacearum UW163 0.53 UW163_RS15385 transcriptional regulator 0.83 UW163_RS06680 3-dehydroquinate synthase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.52 GFF3249 Transcriptional regulator, ArsR family 0.59 GFF1331 3-dehydroquinate synthase (EC 4.2.3.4) low > 90
Ralstonia solanacearum PSI07 0.52 RPSI07_RS15365 ArsR family transcriptional regulator 0.82 RPSI07_RS10300 3-dehydroquinate synthase — —
Agrobacterium fabrum C58 0.50 Atu3466 ArsR family transcriptional regulator 0.36 Atu3625 3-dehydroquinate synthase — —
Acinetobacter radioresistens SK82 0.50 MPMX26_01494 Biofilm growth-associated repressor 0.53 MPMX26_02810 3-dehydroquinate synthase — —
Dickeya dianthicola 67-19 0.50 HGI48_RS00955 helix-turn-helix transcriptional regulator 0.47 HGI48_RS19675 3-dehydroquinate synthase — —
Dickeya dianthicola ME23 0.50 DZA65_RS01015 helix-turn-helix transcriptional regulator 0.47 DZA65_RS20760 3-dehydroquinate synthase — —
Rhodopseudomonas palustris CGA009 0.47 TX73_005240 metalloregulator ArsR/SmtB family transcription factor 0.36 TX73_002610 3-dehydroquinate synthase — —
Sinorhizobium meliloti 1021 0.46 SMa1056 transcriptional regulator 0.36 SMc00696 3-dehydroquinate synthase — —
Azospirillum brasilense Sp245 0.44 AZOBR_RS20775 ArsR family transcriptional regulator 0.40 AZOBR_RS03220 3-dehydroquinate synthase — —
Magnetospirillum magneticum AMB-1 0.43 AMB_RS14620 ArsR family transcriptional regulator 0.41 AMB_RS19865 3-dehydroquinate synthase — —
Phaeobacter inhibens DSM 17395 0.42 PGA1_c12380 regulatory protein SoxR 0.36 PGA1_c14100 3-dehydroquinate synthase AroB — —
Vibrio cholerae E7946 ATCC 55056 0.42 CSW01_03555 transcriptional regulator 0.49 CSW01_13300 3-dehydroquinate synthase low > 62
Dinoroseobacter shibae DFL-12 0.42 Dshi_2812 transcriptional regulator, ArsR family (RefSeq) 0.37 Dshi_1608 3-dehydroquinate synthase (RefSeq) — —
Kangiella aquimarina DSM 16071 0.41 B158DRAFT_0345 transcriptional regulator, ArsR family 0.41 B158DRAFT_0764 3-dehydroquinate synthase (EC 4.2.3.4) — —
Sphingomonas koreensis DSMZ 15582 0.40 Ga0059261_0944 Predicted transcriptional regulators 0.37 Ga0059261_3591 3-dehydroquinate synthase (EC 4.2.3.4) — —
Shewanella amazonensis SB2B 0.40 Sama_0920 transcriptional regulator HlyU (RefSeq) 0.53 Sama_3367 3-dehydroquinate synthase (RefSeq) low > 62
Rhodanobacter denitrificans MT42 0.40 LRK55_RS07465 metalloregulator ArsR/SmtB family transcription factor 0.44 LRK55_RS04085 3-dehydroquinate synthase — —
Shewanella oneidensis MR-1 0.40 SO3538 hlyU transcriptional regulator HlyU (NCBI ptt file) 0.52 SO0287 aroB 3-dehydroquinate synthase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.40 Shewana3_3141 ArsR family transcriptional regulator (RefSeq) 0.52 Shewana3_3893 aroB 3-dehydroquinate synthase (RefSeq) low > 73
Rhodanobacter denitrificans FW104-10B01 0.39 LRK54_RS07735 metalloregulator ArsR/SmtB family transcription factor 0.44 LRK54_RS04310 3-dehydroquinate synthase — —
Shewanella loihica PV-4 0.39 Shew_1095 ArsR family transcriptional regulator (RefSeq) 0.50 Shew_0214 3-dehydroquinate synthase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.39 MIT1002_02372 Biofilm growth-associated repressor 0.52 MIT1002_00447 3-dehydroquinate synthase — —
Pectobacterium carotovorum WPP14 0.34 HER17_RS03345 metalloregulator ArsR/SmtB family transcription factor 0.47 HER17_RS01780 3-dehydroquinate synthase low > 75
Escherichia coli BW25113 0.31 b2667 ygaV predicted DNA-binding transcriptional regulator (NCBI) 0.48 b3389 aroB 3-dehydroquinate synthase (NCBI) low > 76
Escherichia coli ECRC98 0.31 JDDGAC_24545 ygaV putative HTH-type transcriptional regulator YgaV 0.48 JDDGAC_20745 aroB 3-dehydroquinate synthase low > 86
Escherichia coli BL21 0.31 ECD_02523 tributyltin-inducible repressor of ygaVP 0.49 ECD_03241 3-dehydroquinate synthase low > 61
Escherichia coli ECRC101 0.31 MCAODC_11405 ygaV putative HTH-type transcriptional regulator YgaV 0.48 MCAODC_07645 aroB 3-dehydroquinate synthase 0.64 61
Escherichia coli ECRC100 0.31 OKFHMN_20885 ygaV putative HTH-type transcriptional regulator YgaV 0.48 OKFHMN_17115 aroB 3-dehydroquinate synthase low > 80
Escherichia coli ECOR38 0.31 HEPCGN_20180 ygaV putative HTH-type transcriptional regulator YgaV 0.48 HEPCGN_15935 aroB 3-dehydroquinate synthase low > 87
Escherichia coli ECRC62 0.31 BNILDI_11270 ygaV putative HTH-type transcriptional regulator YgaV 0.49 BNILDI_02615 aroB 3-dehydroquinate synthase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.31 OHPLBJKB_01065 putative HTH-type transcriptional regulator YgaV 0.48 OHPLBJKB_00314 3-dehydroquinate synthase low > 73
Escherichia coli ECRC102 0.31 NIAGMN_18650 ygaV putative HTH-type transcriptional regulator YgaV 0.48 NIAGMN_14885 aroB 3-dehydroquinate synthase — —
Escherichia coli ECRC99 0.31 KEDOAH_07255 ygaV putative HTH-type transcriptional regulator YgaV 0.48 KEDOAH_11025 aroB 3-dehydroquinate synthase — —
Escherichia coli ECOR27 0.31 NOLOHH_12710 ygaV putative HTH-type transcriptional regulator YgaV 0.49 NOLOHH_08905 aroB 3-dehydroquinate synthase low > 75
Escherichia fergusonii Becca 0.30 EFB2_01263 putative HTH-type transcriptional regulator YgaV 0.48 EFB2_00439 3-dehydroquinate synthase low > 86
Escherichia coli Nissle 1917 0.30 ECOLIN_RS14870 metalloregulator ArsR/SmtB family transcription factor 0.48 ECOLIN_RS19360 3-dehydroquinate synthase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF1572 Transcriptional regulator, ArsR family 0.47 GFF630 3-dehydroquinate synthase (EC 4.2.3.4) low > 78
Enterobacter asburiae PDN3 0.28 EX28DRAFT_2752 Predicted transcriptional regulators 0.48 EX28DRAFT_4153 3-dehydroquinate synthase (EC 4.2.3.4) low > 76
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_595 Arsenical resistance operon repressor 0.58 Pf6N2E2_3754 3-dehydroquinate synthase (EC 4.2.3.4) — —

Not shown: 2 genomes with orthologs for RR42_RS35445 only; 37 genomes with orthologs for RR42_RS19005 only