| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS14420 | | branched-chain amino acid transporter permease subunit LivH | 1.0 | RR42_RS14425 | | leucine ABC transporter substrate-binding protein | 0.84 | 1 |
| Herbaspirillum seropedicae SmR1 | 0.90 | HSERO_RS08275 | | branched-chain amino acid transporter permease subunit LivH | 0.81 | HSERO_RS08270 | | amino acid ABC transporter substrate-binding protein | 0.62 | 2 |
| Castellaniella sp019104865 MT123 | 0.78 | ABCV34_RS03620 | | branched-chain amino acid ABC transporter permease LivH | 0.66 | ABCV34_RS03585 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.97 | 20 |
| Serratia liquefaciens MT49 | 0.64 | IAI46_00965 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.49 | IAI46_00960 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 86 |
| Dickeya dianthicola 67-19 | 0.63 | HGI48_RS20725 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.52 | HGI48_RS20730 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein | 0.82 | 6 |
| Pectobacterium carotovorum WPP14 | 0.63 | HER17_RS00500 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.51 | HER17_RS00495 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.99 | 2 |
| Dickeya dianthicola ME23 | 0.63 | DZA65_RS21735 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.52 | DZA65_RS21740 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 75 |
| Dickeya dadantii 3937 | 0.63 | DDA3937_RS00665 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.53 | DDA3937_RS00660 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 74 |
| Rahnella sp. WP5 | 0.62 | EX31_RS14800 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | EX31_RS14805 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 89 |
| Azospirillum sp. SherDot2 | 0.60 | MPMX19_06002 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.40 | MPMX19_04840 | | Leu/Ile/Val-binding protein | — | — |
| Pantoea sp. MT58 | 0.60 | IAI47_01570 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | IAI47_01565 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 76 |
| Pseudomonas fluorescens SBW25-INTG | 0.60 | PFLU_RS06640 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.56 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.92 | 2 |
| Azospirillum brasilense Sp245 | 0.60 | AZOBR_RS08235 | | L-proline and D-alanine ABC transporter, permease component 1 (from data) | 0.37 | AZOBR_RS08260 | | L-proline and D-alanine ABC transporter, substrate-binding component (from data) | 0.49 | 10 |
| Pseudomonas fluorescens SBW25 | 0.60 | PFLU_RS06640 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.56 | PFLU_RS06645 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.91 | 2 |
| Pseudomonas fluorescens FW300-N2E3 | 0.60 | AO353_17120 | | branched-chain amino acid transporter permease subunit LivH | 0.58 | AO353_17125 | | leucine ABC transporter substrate-binding protein | 0.73 | 2 |
| Pseudomonas simiae WCS417 | 0.60 | PS417_06610 | | branched-chain amino acid transporter permease subunit LivH | 0.55 | PS417_06615 | | ABC transporter for branched-chain amino acids, substrate-binding component (from data) | — | — |
| Klebsiella michiganensis M5al | 0.59 | BWI76_RS26345 | | branched-chain amino acid ABC transporter permease LivH | 0.50 | BWI76_RS26350 | | branched chain amino acid ABC transporter substrate-binding protein | low | > 92 |
| Erwinia tracheiphila SCR3 | 0.59 | LU632_RS19250 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | LU632_RS19255 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 74 |
| Enterobacter asburiae PDN3 | 0.59 | EX28DRAFT_4289 | | Branched-chain amino acid ABC-type transport system, permease components | 0.50 | EX28DRAFT_4290 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.82 | 17 |
| Pseudomonas stutzeri RCH2 | 0.59 | Psest_1311 | | Branched-chain amino acid ABC-type transport system, permease components | 0.58 | Psest_1312 | | ABC-type branched-chain amino acid transport systems, periplasmic component | 0.39 | 5 |
| Enterobacter sp. TBS_079 | 0.59 | MPMX20_04333 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.49 | MPMX20_04334 | | Leucine-specific-binding protein | 0.20 | 15 |
| Pseudomonas sp. RS175 | 0.59 | PFR28_00539 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.56 | PFR28_00540 | | Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein | 0.92 | 2 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.58 | OHPLBJKB_00246 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.50 | OHPLBJKB_00245 | | Leucine-specific-binding protein | low | > 73 |
| Escherichia coli BW25113 | 0.58 | b3457 | livH | leucine/isoleucine/valine transporter subunit (NCBI) | 0.50 | b3458 | livK | leucine transporter subunit (NCBI) | 0.89 | 5 |
| Escherichia coli ECRC99 | 0.58 | KEDOAH_11395 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | KEDOAH_11400 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli ECRC100 | 0.58 | OKFHMN_16745 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | OKFHMN_16740 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 80 |
| Escherichia coli ECRC102 | 0.58 | NIAGMN_14515 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | NIAGMN_14510 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | — | — |
| Escherichia coli BL21 | 0.58 | ECD_03306 | | branched-chain amino acid ABC transporter permease | 0.50 | ECD_03309 | | branched-chain amino acid ABC transporter periplasmic binding protein | low | > 61 |
| Escherichia coli ECOR27 | 0.58 | NOLOHH_08540 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | NOLOHH_08535 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 75 |
| Escherichia coli ECRC98 | 0.58 | JDDGAC_20375 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | JDDGAC_20370 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 86 |
| Escherichia coli ECOR38 | 0.58 | HEPCGN_15565 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | HEPCGN_15560 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 87 |
| Escherichia coli ECRC62 | 0.58 | BNILDI_02965 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | BNILDI_02970 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 75 |
| Escherichia coli Nissle 1917 | 0.58 | ECOLIN_RS19770 | | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | ECOLIN_RS19775 | | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 55 |
| Escherichia coli ECRC101 | 0.58 | MCAODC_07275 | livH | high-affinity branched-chain amino acid ABC transporter permease LivH | 0.50 | MCAODC_07270 | livK | high-affinity branched-chain amino acid ABC transporter substrate-binding protein LivK | low | > 87 |
| Pseudomonas fluorescens GW456-L13 | 0.58 | PfGW456L13_4608 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.57 | PfGW456L13_4606 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.84 | 2 |
| Escherichia fergusonii Becca | 0.58 | EFB2_00365 | | High-affinity branched-chain amino acid transport system permease protein LivH | 0.50 | EFB2_00364 | | Leucine-specific-binding protein | low | > 86 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.58 | GFF549 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.50 | GFF548 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | low | > 78 |
| Pseudomonas putida KT2440 | 0.58 | PP_1140 | | branched chain amino acid transporter - permease subunit | 0.55 | PP_1141 | | branched-chain amino acids ABC transporter - periplasmic leucine binding subunit | 0.77 | 2 |
| Marinobacter adhaerens HP15 | 0.58 | HP15_3056 | | high-affinity branched-chain amino acid ABC transporter, permease protein | 0.56 | HP15_3055 | | high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein | 0.88 | 2 |
| Pseudomonas fluorescens FW300-N2C3 | 0.58 | AO356_05325 | | branched-chain amino acid transporter permease subunit LivH | 0.58 | AO356_05320 | | leucine ABC transporter substrate-binding protein | 0.92 | 1 |
| Pseudomonas fluorescens FW300-N2E2 | 0.58 | Pf6N2E2_2923 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, permease component 1 LivH (from data) | 0.57 | Pf6N2E2_2921 | | ABC transporter for L-leucine/L-phenylalanine/D-alanine, substrate-binding component LivK (from data) | 0.82 | 2 |
| Pseudomonas fluorescens FW300-N1B4 | 0.58 | Pf1N1B4_3217 | | High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) | 0.58 | Pf1N1B4_3218 | | High-affinity leucine-specific transport system, periplasmic binding protein LivK (TC 3.A.1.4.1) | 0.34 | 11 |
| Magnetospirillum magneticum AMB-1 | 0.58 | AMB_RS09135 | | branched-chain amino acid ABC transporter permease | 0.40 | AMB_RS15010 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 64 |
| Pseudomonas sp. S08-1 | 0.57 | OH686_04610 | | Branched-chain amino acid ABC transporter, permease protein LivH | 0.57 | OH686_04605 | | Branched-chain amino acid ABC transporter, substrate-binding protein LivJ | 0.97 | 3 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.57 | Psyr_0598 | | amino acid/amide ABC transporter membrane protein 1, HAAT family | 0.57 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Pseudomonas syringae pv. syringae B728a | 0.57 | Psyr_0598 | | amino acid/amide ABC transporter membrane protein 1, HAAT family | 0.57 | Psyr_3845 | | L-leucine-binding protein / L-valine-binding protein / L-isoleucine-binding protein | low | > 86 |
| Rhodospirillum rubrum S1H | 0.57 | Rru_A1751 | | inner-membrane translocator (NCBI) | 0.40 | Rru_A1746 | | Extracellular ligand-binding receptor (NCBI) | 0.82 | 2 |
| Variovorax sp. OAS795 | 0.56 | ABID97_RS27580 | | branched-chain amino acid ABC transporter permease LivH | 0.31 | ABID97_RS27585 | | branched-chain amino acid ABC transporter substrate-binding protein | low | > 91 |
| Desulfovibrio vulgaris Hildenborough JW710 | 0.53 | DVU0548 | livH | high-affinity branched-chain amino acid ABC transporter, permease protein (TIGR) | 0.29 | DVU0547 | | high-affinity branched chain amino acid ABC transporter, periplasmic branched chain amino acid-binding protein (TIGR) | 0.88 | 2 |
| Desulfovibrio vulgaris Miyazaki F | 0.52 | DvMF_2608 | | inner-membrane translocator (RefSeq) | 0.30 | DvMF_2607 | | Extracellular ligand-binding receptor (RefSeq) | — | — |
| Agrobacterium fabrum C58 | 0.51 | Atu2427 | | ABC transporter, membrane spanning protein | 0.36 | Atu2276 | | ABC transporter, substrate binding protein (branched chain amino acid) | low | > 89 |
| Rhodopseudomonas palustris CGA009 | 0.51 | TX73_019710 | | branched-chain amino acid ABC transporter permease | 0.37 | TX73_019730 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.85 | 2 |
| Sinorhizobium meliloti 1021 | 0.49 | SMc01951 | | high-affinity branched-chain amino acid ABC transporter permease | 0.39 | SMc00078 | | Leu/Ile/Val-binding protein | low | > 103 |
| Bosea sp. OAE506 | 0.49 | ABIE41_RS13635 | | branched-chain amino acid ABC transporter permease LivH | 0.40 | ABIE41_RS13610 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.57 | 3 |
| Rhizobium sp. OAE497 | 0.47 | ABIE40_RS14715 | | branched-chain amino acid ABC transporter permease LivH | 0.37 | ABIE40_RS14690 | | branched-chain amino acid ABC transporter substrate-binding protein | 0.71 | 9 |
| Dinoroseobacter shibae DFL-12 | 0.22 | Dshi_1979 | | inner-membrane translocator (RefSeq) | 0.13 | Dshi_1522 | | Extracellular ligand-binding receptor (RefSeq) | low | > 64 |
Not shown: 1 genomes with orthologs for RR42_RS14420 only; 1 genomes with orthologs for RR42_RS14425 only