Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS00905 | | haloacid dehalogenase | 1.0 | RR42_RS07845 | | transcription-repair coupling factor | 0.41 | 1 |
Ralstonia solanacearum PSI07 | 0.66 | RPSI07_RS22825 | | HAD family phosphatase | 0.82 | RPSI07_RS16040 | | transcription-repair coupling factor | low | > 81 |
Ralstonia solanacearum GMI1000 | 0.66 | RS_RS01330 | | HAD family phosphatase | 0.82 | RS_RS08275 | | transcription-repair coupling factor | low | > 80 |
Ralstonia sp. UNC404CL21Col | 0.64 | ABZR87_RS06290 | | HAD family phosphatase | 0.82 | ABZR87_RS13240 | | transcription-repair coupling factor | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.63 | RALBFv3_RS10490 | | HAD family phosphatase | 0.82 | RALBFv3_RS01445 | | transcription-repair coupling factor | low | > 76 |
Ralstonia solanacearum UW163 | 0.63 | UW163_RS03090 | | HAD family phosphatase | 0.82 | UW163_RS14755 | | transcription-repair coupling factor | — | — |
Paraburkholderia graminis OAS925 | 0.41 | ABIE53_006171 | | HAD superfamily hydrolase (TIGR01509 family) | 0.77 | ABIE53_002095 | | transcription-repair coupling factor (superfamily II helicase) | low | > 113 |
Acidovorax sp. GW101-3H11 | 0.41 | Ac3H11_3005 | | Putative phosphatase YieH | 0.64 | Ac3H11_328 | | Transcription-repair coupling factor | low | > 79 |
Variovorax sp. OAS795 | 0.41 | ABID97_RS25155 | | HAD family phosphatase | 0.64 | ABID97_RS17285 | | transcription-repair coupling factor | low | > 91 |
Variovorax sp. SCN45 | 0.40 | GFF2001 | | Putative phosphatase YieH | 0.64 | GFF412 | | Transcription-repair coupling factor | low | > 127 |
Synechococcus elongatus PCC 7942 | 0.39 | Synpcc7942_0085 | | HAD-superfamily hydrolase subfamily IA, variant 3 | 0.26 | Synpcc7942_1326 | mfd | transcription-repair coupling factor | low | > 38 |
Burkholderia phytofirmans PsJN | 0.38 | BPHYT_RS24950 | | HAD family hydrolase | 0.77 | BPHYT_RS09290 | | helicase | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.37 | H281DRAFT_02444 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | 0.76 | H281DRAFT_00880 | | transcription-repair coupling factor | low | > 103 |
Paraburkholderia sabiae LMG 24235 | 0.33 | QEN71_RS37130 | | HAD family phosphatase | 0.76 | QEN71_RS22060 | | transcription-repair coupling factor | low | > 153 |
Sinorhizobium meliloti 1021 | 0.30 | SMc01502 | | hydrolase phosphatase | 0.29 | SMc04450 | | transcription-repair coupling factor | low | > 103 |
Xanthomonas campestris pv. campestris strain 8004 | 0.29 | Xcc-8004.1753.1 | | hydrolase | 0.44 | Xcc-8004.1775.1 | | Transcription-repair coupling factor | low | > 74 |
Rhizobium sp. OAE497 | 0.29 | ABIE40_RS16990 | | HAD family hydrolase | 0.29 | ABIE40_RS09310 | | transcription-repair coupling factor | low | > 107 |
Phaeobacter inhibens DSM 17395 | 0.28 | PGA1_c29250 | | putative haloacid dehalogenase-like hydrolase | 0.28 | PGA1_c14920 | | transcription-repair-coupling factor Mfd | low | > 62 |
Rhodopseudomonas palustris CGA009 | 0.27 | TX73_002330 | | HAD family hydrolase | 0.30 | TX73_013805 | | transcription-repair coupling factor | low | > 86 |
Agrobacterium fabrum C58 | 0.26 | Atu0790 | | hypothetical protein | 0.29 | Atu1778 | | transcription-repair coupling factor | low | > 89 |
Rahnella sp. WP5 | 0.26 | EX31_RS06035 | | 6-phosphogluconate phosphatase | 0.44 | EX31_RS24520 | | transcription-repair coupling factor | low | > 89 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.25 | GFF1739 | | Putative phosphatase YieH | 0.45 | GFF3397 | | Transcription-repair coupling factor | low | > 78 |
Herbaspirillum seropedicae SmR1 | 0.25 | HSERO_RS00780 | | sugar transferase | 0.72 | HSERO_RS15180 | | transcription-repair coupling factor | low | > 78 |
Klebsiella michiganensis M5al | 0.25 | BWI76_RS00115 | | 6-phosphogluconate phosphatase | 0.44 | BWI76_RS11205 | | transcription-repair coupling factor | low | > 92 |
Dickeya dadantii 3937 | 0.25 | DDA3937_RS21430 | | 6-phosphogluconate phosphatase | 0.45 | DDA3937_RS13000 | | transcription-repair coupling factor | low | > 74 |
Dickeya dianthicola 67-19 | 0.25 | HGI48_RS21600 | | 6-phosphogluconate phosphatase | 0.44 | HGI48_RS13065 | | transcription-repair coupling factor | low | > 71 |
Dickeya dianthicola ME23 | 0.25 | DZA65_RS22585 | | 6-phosphogluconate phosphatase | 0.44 | DZA65_RS13530 | | transcription-repair coupling factor | 0.53 | 5 |
Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_3999 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | 0.45 | EX28DRAFT_1816 | | transcription-repair coupling factor (mfd) | low | > 76 |
Sphingomonas koreensis DSMZ 15582 | 0.24 | Ga0059261_2217 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | 0.30 | Ga0059261_0960 | | transcription-repair coupling factor (mfd) | — | — |
Pectobacterium carotovorum WPP14 | 0.24 | HER17_RS21735 | | 6-phosphogluconate phosphatase | 0.45 | HER17_RS08775 | | transcription-repair coupling factor | low | > 75 |
Escherichia coli ECRC101 | 0.24 | MCAODC_05440 | yieH | 6-phosphogluconate phosphatase | 0.45 | MCAODC_22830 | mfd | transcription-repair coupling factor | low | > 87 |
Escherichia coli BW25113 | 0.24 | b3715 | yieH | predicted hydrolase (NCBI) | 0.45 | b1114 | mfd | transcription-repair coupling factor (NCBI) | low | > 76 |
Escherichia coli ECRC100 | 0.24 | OKFHMN_14930 | yieH | 6-phosphogluconate phosphatase | 0.45 | OKFHMN_03470 | mfd | transcription-repair coupling factor | low | > 80 |
Escherichia coli ECRC102 | 0.24 | NIAGMN_12685 | yieH | 6-phosphogluconate phosphatase | 0.45 | NIAGMN_24360 | mfd | transcription-repair coupling factor | — | — |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.24 | A4249_RS04845 | | HAD-IA family hydrolase | 0.30 | A4249_RS04775 | | transcription-repair coupling factor | low | > 48 |
Escherichia coli ECOR38 | 0.24 | HEPCGN_13635 | yieH | 6-phosphogluconate phosphatase | 0.45 | HEPCGN_24015 | mfd | transcription-repair coupling factor | low | > 87 |
Escherichia fergusonii Becca | 0.24 | EFB2_04917 | | 6-phosphogluconate phosphatase | 0.45 | EFB2_02861 | | Transcription-repair-coupling factor | low | > 86 |
Escherichia coli ECRC99 | 0.24 | KEDOAH_13220 | yieH | 6-phosphogluconate phosphatase | 0.45 | KEDOAH_24285 | mfd | transcription-repair coupling factor | — | — |
Escherichia coli ECRC98 | 0.24 | JDDGAC_18550 | yieH | 6-phosphogluconate phosphatase | 0.45 | JDDGAC_07130 | mfd | transcription-repair coupling factor | low | > 86 |
Enterobacter sp. TBS_079 | 0.24 | MPMX20_04644 | | 6-phosphogluconate phosphatase | 0.45 | MPMX20_01795 | | Transcription-repair-coupling factor | low | > 85 |
Escherichia coli BL21 | 0.23 | ECD_03599 | | phosphoenolpyruvate and 6-phosphogluconate phosphatase | 0.45 | ECD_01110 | | transcription-repair coupling factor | low | > 61 |
Escherichia coli ECRC62 | 0.23 | BNILDI_04450 | yieH | 6-phosphogluconate phosphatase | 0.45 | BNILDI_19160 | mfd | transcription-repair coupling factor | low | > 75 |
Escherichia coli ECOR27 | 0.23 | NOLOHH_07080 | yieH | 6-phosphogluconate phosphatase | 0.45 | NOLOHH_20995 | mfd | transcription-repair coupling factor | low | > 75 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 0.23 | OHPLBJKB_04338 | | 6-phosphogluconate phosphatase | 0.45 | OHPLBJKB_02552 | | Transcription-repair-coupling factor | low | > 73 |
Pseudomonas fluorescens SBW25-INTG | 0.23 | PFLU_RS10295 | | HAD-IA family hydrolase | 0.47 | PFLU_RS07710 | | transcription-repair coupling factor | 0.20 | 101 |
Bosea sp. OAE506 | 0.23 | ABIE41_RS00405 | | HAD-IA family hydrolase | 0.29 | ABIE41_RS15825 | | transcription-repair coupling factor | low | > 77 |
Pseudomonas fluorescens SBW25 | 0.23 | PFLU_RS10295 | | HAD-IA family hydrolase | 0.47 | PFLU_RS07710 | | transcription-repair coupling factor | low | > 109 |
Pseudomonas simiae WCS417 | 0.22 | PS417_09695 | | hydrolase | 0.47 | PS417_07635 | | transcription-repair coupling factor | low | > 88 |
Serratia liquefaciens MT49 | 0.21 | IAI46_25215 | | 6-phosphogluconate phosphatase | 0.44 | IAI46_10320 | | transcription-repair coupling factor | low | > 86 |
Pantoea sp. MT58 | 0.19 | IAI47_18805 | | 6-phosphogluconate phosphatase | 0.46 | IAI47_11975 | | transcription-repair coupling factor | low | > 76 |
Echinicola vietnamensis KMM 6221, DSM 17526 | 0.18 | Echvi_1029 | | haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | 0.24 | Echvi_1312 | | transcription-repair coupling factor (mfd) | low | > 79 |
Magnetospirillum magneticum AMB-1 | 0.17 | AMB_RS00805 | | haloacid dehalogenase | 0.31 | AMB_RS12390 | | transcription-repair coupling factor | low | > 64 |
Shewanella sp. ANA-3 | 0.17 | Shewana3_0432 | | 2-deoxyglucose-6-phosphatase (RefSeq) | 0.45 | Shewana3_2289 | | transcription-repair coupling factor (RefSeq) | low | > 73 |
Shewanella oneidensis MR-1 | 0.16 | SO0431 | | HAD-superfamily hydrolase, subfamily IA, variant 3 protein family (NCBI ptt file) | 0.46 | SO2255 | mfd | transcription-repair coupling factor (NCBI ptt file) | low | > 76 |
Azospirillum sp. SherDot2 | 0.16 | MPMX19_01934 | | Phosphorylated carbohydrates phosphatase | 0.32 | MPMX19_00876 | | Transcription-repair-coupling factor | low | > 112 |
Phocaeicola dorei CL03T12C01 | 0.15 | ABI39_RS14020 | | HAD family phosphatase | 0.25 | ABI39_RS11420 | | transcription-repair coupling factor | 0.46 | 18 |
Erwinia tracheiphila SCR3 | 0.15 | LU632_RS15700 | yqaB | fructose-1-phosphate/6-phosphogluconate phosphatase | 0.44 | LU632_RS14730 | mfd | transcription-repair coupling factor | low | > 74 |
Pontibacter actiniarum KMM 6156, DSM 19842 | 0.13 | CA264_06975 | | phosphatase | 0.26 | CA264_15820 | | transcription-repair coupling factor | low | > 74 |
Mycobacterium tuberculosis H37Rv | 0.11 | Rv3400 | | Probable hydrolase | 0.25 | Rv1020 | | Probable transcription-repair coupling factor Mfd (TRCF) | low | > 58 |
Not shown: 5 genomes with orthologs for RR42_RS00905 only; 34 genomes with orthologs for RR42_RS07845 only