Conservation of cofitness between RR42_RS09005 and RR42_RS07300 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS09005 competence protein ComJ 1.0 RR42_RS07300 hydroxydechloroatrazine ethylaminohydrolase 0.35 9
Ralstonia solanacearum PSI07 0.81 RPSI07_RS08205 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.78 RPSI07_RS14070 8-oxoguanine deaminase low > 81
Ralstonia solanacearum GMI1000 0.81 RS_RS16875 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.76 RS_RS10630 8-oxoguanine deaminase low > 80
Ralstonia solanacearum IBSBF1503 0.79 RALBFv3_RS09065 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.76 RALBFv3_RS03240 8-oxoguanine deaminase low > 76
Ralstonia solanacearum UW163 0.79 UW163_RS04530 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.76 UW163_RS10485 8-oxoguanine deaminase — —
Ralstonia sp. UNC404CL21Col 0.78 ABZR87_RS04360 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.80 ABZR87_RS15090 8-oxoguanine deaminase low > 80
Paraburkholderia sabiae LMG 24235 0.64 QEN71_RS23895 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.73 QEN71_RS07050 8-oxoguanine deaminase low > 153
Paraburkholderia graminis OAS925 0.62 ABIE53_001640 23S rRNA (adenine2030-N6)-methyltransferase 0.73 ABIE53_002386 8-oxoguanine deaminase low > 113
Burkholderia phytofirmans PsJN 0.62 BPHYT_RS06880 competence protein ComJ 0.74 BPHYT_RS11520 hydroxydechloroatrazine ethylaminohydrolase low > 109
Herbaspirillum seropedicae SmR1 0.58 HSERO_RS10595 competence protein ComJ 0.72 HSERO_RS16310 hydroxydechloroatrazine ethylaminohydrolase low > 78
Variovorax sp. SCN45 0.41 GFF2057 23S rRNA (adenine(2030)-N(6))-methyltransferase (EC 2.1.1.266) 0.78 GFF5229 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF1683 Protein involved in catabolism of external DNA 0.78 GFF344 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) low > 90
Pantoea sp. MT58 0.40 IAI47_01340 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.70 IAI47_02165 8-oxoguanine deaminase low > 76
Rahnella sp. WP5 0.40 EX31_RS05170 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 EX31_RS08885 8-oxoguanine deaminase low > 89
Pseudomonas stutzeri RCH2 0.35 Psest_0408 Protein involved in catabolism of external DNA 0.40 Psest_1214 Cytosine deaminase and related metal-dependent hydrolases low > 67
Pseudomonas sp. S08-1 0.35 OH686_09780 23S rRNA (adenine(2030)-N(6))-methyltransferase 0.19 OH686_20850 S-adenosylhomocysteine deaminase / Methylthioadenosine deaminase low > 80
Azospirillum brasilense Sp245 0.35 AZOBR_RS21900 lactate dehydrogenase 0.13 AZOBR_RS22765 hydrolase low > 97
Agrobacterium fabrum C58 0.35 Atu1135 hypothetical protein 0.11 Atu4694 chlorohydrolase low > 89
Sinorhizobium meliloti 1021 0.34 SMc00608 hypothetical protein 0.12 SMc02414 hydrolase low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4772 Protein of unknown function DUF519 0.40 Psyr_0669 Amidohydrolase low > 86
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4772 Protein of unknown function DUF519 0.40 Psyr_0669 Amidohydrolase low > 86
Pseudomonas putida KT2440 0.34 PP_4945 23S rRNA m(6)A2030 methyltransferase 0.74 PP_2584 hydroxydechloroatrazine ethylaminohydrolase low > 96
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_3679 Protein involved in catabolism of external DNA 0.40 Pf6N2E2_3473 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) low > 103
Rhodanobacter sp. FW510-T8 0.34 OKGIIK_04560 rlmJ 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.14 OKGIIK_09530 ssnA TRZ/ATZ family hydrolase low > 52
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_219 Protein involved in catabolism of external DNA 0.39 PfGW456L13_13 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) low > 87
Pseudomonas simiae WCS417 0.33 PS417_02200 lactate dehydrogenase 0.40 PS417_03215 8-oxoguanine deaminase — —
Pseudomonas sp. RS175 0.33 PFR28_05056 Ribosomal RNA large subunit methyltransferase J 0.40 PFR28_05255 8-oxoguanine deaminase low > 88
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_08990 lactate dehydrogenase 0.40 AO356_08005 8-oxoguanine deaminase 0.33 17
Pseudomonas fluorescens FW300-N2E3 0.33 AO353_12840 lactate dehydrogenase 0.40 AO353_06110 8-oxoguanine deaminase low > 101
Pseudomonas fluorescens SBW25 0.33 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 PFLU_RS03295 8-oxoguanine deaminase low > 109
Pseudomonas fluorescens SBW25-INTG 0.33 PFLU_RS02255 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.40 PFLU_RS03295 8-oxoguanine deaminase low > 109
Azospirillum sp. SherDot2 0.33 MPMX19_01202 Ribosomal RNA large subunit methyltransferase J 0.14 MPMX19_04687 Atrazine chlorohydrolase low > 112
Rhodanobacter denitrificans MT42 0.33 LRK55_RS01780 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.15 LRK55_RS02230 TRZ/ATZ family hydrolase low > 63
Rhodanobacter denitrificans FW104-10B01 0.33 LRK54_RS02005 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.15 LRK54_RS02475 TRZ/ATZ family hydrolase low > 59
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_1481 Protein involved in catabolism of external DNA 0.39 Pf1N1B4_1249 Guanine deaminase (EC 3.5.4.3); Hydroxydechloroatrazine ethylaminohydrolase (EC 3.5.99.3) low > 87
Lysobacter sp. OAE881 0.32 ABIE51_RS14285 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.16 ABIE51_RS13495 TRZ/ATZ family hydrolase low > 62
Phaeobacter inhibens DSM 17395 0.31 PGA1_c26480 Protein involved in catabolism of external DNA 0.55 PGA1_c21850 putative hydroxydechloroatrazine ethylaminohydrolase low > 62
Bosea sp. OAE506 0.29 ABIE41_RS11490 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ 0.39 ABIE41_RS01930 8-oxoguanine deaminase low > 77
Marinobacter adhaerens HP15 0.25 HP15_2563 protein containing DUF519 0.20 HP15_1228 chlorohydrolase/deaminase family protein low > 73

Not shown: 43 genomes with orthologs for RR42_RS09005 only; 9 genomes with orthologs for RR42_RS07300 only