Conservation of cofitness between Psyr_1655 and Psyr_5019 in Pseudomonas syringae pv. syringae B728a

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1655 TatD-related deoxyribonuclease 1.0 Psyr_5019 Acetyl-CoA hydrolase 0.41 11
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1655 TatD-related deoxyribonuclease 1.00 Psyr_5019 Acetyl-CoA hydrolase low > 86
Pseudomonas fluorescens SBW25 0.89 PFLU_RS23020 TatD family hydrolase 0.83 PFLU_RS00540 acetyl-CoA hydrolase/transferase family protein 0.48 35
Pseudomonas fluorescens SBW25-INTG 0.89 PFLU_RS23020 TatD family hydrolase 0.83 PFLU_RS00540 acetyl-CoA hydrolase/transferase family protein low > 109
Pseudomonas fluorescens FW300-N2E2 0.89 Pf6N2E2_5960 Putative deoxyribonuclease YcfH 0.82 Pf6N2E2_4041 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 103
Pseudomonas fluorescens FW300-N2C3 0.89 AO356_20205 hydrolase TatD 0.82 AO356_10875 acetyl-CoA hydrolase low > 104
Pseudomonas simiae WCS417 0.89 PS417_21405 hydrolase TatD 0.84 PS417_00555 acetyl-CoA hydrolase low > 88
Pseudomonas sp. RS175 0.89 PFR28_03002 putative metal-dependent hydrolase YcfH 0.83 PFR28_04722 Succinyl-CoA:coenzyme A transferase low > 88
Pseudomonas fluorescens FW300-N2E3 0.88 AO353_01325 hydrolase TatD 0.84 AO353_11075 acetyl-CoA hydrolase low > 101
Pseudomonas fluorescens GW456-L13 0.88 PfGW456L13_2112 Putative deoxyribonuclease YcfH 0.82 PfGW456L13_559 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 87
Pseudomonas putida KT2440 0.85 PP_1967 tRNA D-aminoacylase 0.83 PP_0154 Succinyl-CoA:acetate CoA-transferase (EC 2.8.3.18) (from data) low > 96
Pseudomonas stutzeri RCH2 0.84 Psest_1696 hydrolase, TatD family 0.73 Psest_1508 succinate CoA transferases 0.28 11
Pseudomonas fluorescens FW300-N1B4 0.84 Pf1N1B4_420 Putative deoxyribonuclease YcfH 0.84 Pf1N1B4_1821 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 87
Shewanella loihica PV-4 0.51 Shew_1582 TatD family hydrolase (RefSeq) 0.09 Shew_3493 acetyl-CoA hydrolase/transferase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.50 SO2610 hydrolase, TatD family (NCBI ptt file) 0.09 SO1708 cat2 4-hydroxybutyrate coenzyme A transferase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.50 Shewana3_1769 TatD family hydrolase (RefSeq) 0.10 Shewana3_2747 acetyl-CoA hydrolase/transferase (RefSeq) low > 73
Cupriavidus basilensis FW507-4G11 0.47 RR42_RS10885 DNAase 0.67 RR42_RS07275 acetyl-CoA hydrolase low > 128
Dechlorosoma suillum PS 0.47 Dsui_2652 hydrolase, TatD family 0.49 Dsui_0799 succinate CoA transferase low > 51
Klebsiella michiganensis M5al 0.47 BWI76_RS11125 metal-dependent hydrolase 0.42 BWI76_RS23950 succinate CoA transferase low > 92
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS12460 TatD family hydrolase 0.66 ABZR87_RS12170 acetyl-CoA hydrolase/transferase family protein low > 80
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.46 GFF3382 Putative deoxyribonuclease YcfH 0.08 GFF3073 4-hydroxybutyrate:acetyl-CoA CoA transferase (EC 2.3.1.-) low > 78
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS12995 DNAase 0.64 HSERO_RS00195 acetyl-CoA hydrolase low > 78
Acinetobacter radioresistens SK82 0.45 MPMX26_01224 putative metal-dependent hydrolase YcfH 0.75 MPMX26_02840 Succinyl-CoA:coenzyme A transferase low > 36
Escherichia coli ECOR38 0.45 HEPCGN_23940 ycfH metal-dependent hydrolase 0.43 HEPCGN_18730 scpC propionyl-CoA:succinate CoA transferase low > 87
Escherichia coli ECOR27 0.45 NOLOHH_21070 ycfH metal-dependent hydrolase 0.43 NOLOHH_11335 scpC propionyl-CoA:succinate CoA transferase — —
Escherichia coli BL21 0.45 ECD_01096 putative DNase 0.43 ECD_02751 propionyl-CoA:succinate CoA transferase low > 61
Escherichia coli BW25113 0.45 b1100 ycfH predicted metallodependent hydrolase (NCBI) 0.43 b2920 ygfH propionyl-CoA:succinate-CoA transferase (NCBI) low > 76
Escherichia coli ECRC100 0.45 OKFHMN_03540 ycfH metal-dependent hydrolase 0.43 OKFHMN_19430 scpC propionyl-CoA:succinate CoA transferase low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.45 OHPLBJKB_02566 putative metal-dependent hydrolase YcfH 0.43 OHPLBJKB_00796 Propionyl-CoA:succinate CoA transferase low > 73
Escherichia coli ECRC99 0.45 KEDOAH_24215 ycfH metal-dependent hydrolase 0.43 KEDOAH_08710 scpC propionyl-CoA:succinate CoA transferase — —
Escherichia coli ECRC102 0.45 NIAGMN_24290 ycfH metal-dependent hydrolase 0.43 NIAGMN_17195 scpC propionyl-CoA:succinate CoA transferase — —
Escherichia coli ECRC101 0.45 MCAODC_22900 ycfH metal-dependent hydrolase 0.43 MCAODC_09950 scpC propionyl-CoA:succinate CoA transferase low > 87
Castellaniella sp019104865 MT123 0.44 ABCV34_RS03960 TatD family hydrolase 0.62 ABCV34_RS09905 succinate CoA transferase low > 48
Paraburkholderia bryophila 376MFSha3.1 0.43 H281DRAFT_00931 TatD DNase family protein 0.68 H281DRAFT_05262 succinyl-CoA:acetate CoA-transferase low > 103
Azospirillum brasilense Sp245 0.42 AZOBR_RS08795 LuxR family transcriptional regulator 0.71 AZOBR_RS24070 acetyl-CoA hydrolase low > 97
Paraburkholderia sabiae LMG 24235 0.42 QEN71_RS21805 TatD family hydrolase 0.67 QEN71_RS07615 acetyl-CoA hydrolase/transferase family protein low > 153
Burkholderia phytofirmans PsJN 0.42 BPHYT_RS09640 DNAase 0.67 BPHYT_RS23830 acetyl-CoA hydrolase low > 109
Magnetospirillum magneticum AMB-1 0.42 AMB_RS12295 TatD family deoxyribonuclease 0.67 AMB_RS07000 acetyl-CoA hydrolase low > 64
Azospirillum sp. SherDot2 0.42 MPMX19_01469 putative metal-dependent hydrolase YcfH 0.71 MPMX19_05657 Succinyl-CoA:coenzyme A transferase low > 112
Rhodopseudomonas palustris CGA009 0.41 TX73_014390 TatD family hydrolase 0.49 TX73_002780 acetyl-CoA hydrolase/transferase family protein low > 86
Acidovorax sp. GW101-3H11 0.40 Ac3H11_2488 Putative deoxyribonuclease YcfH 0.49 Ac3H11_4892 Acetyl-CoA hydrolase (EC 3.1.2.1) low > 79
Rhodospirillum rubrum S1H 0.39 Rru_A1700 TatD-related deoxyribonuclease (NCBI) 0.73 Rru_A1927 Acetyl-CoA hydrolase (NCBI) low > 58
Agrobacterium fabrum C58 0.37 Atu1495 hypothetical protein 0.73 Atu0396 coenzyme A transferase low > 89
Caulobacter crescentus NA1000 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.46 CCNA_03840 succinyl-CoA:coenzyme A transferase low > 66
Caulobacter crescentus NA1000 Δfur 0.29 CCNA_01898 Mg-dependent Dnase TatD 0.46 CCNA_03840 succinyl-CoA:coenzyme A transferase low > 67

Not shown: 44 genomes with orthologs for Psyr_1655 only; 11 genomes with orthologs for Psyr_5019 only